| GenBank top hits | e value | %identity | Alignment |
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| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-103 | 87.14 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
+KD+D GQVLLQGLLNDGLYKFTI+PSHKRLHHS NTK VFNTVVPKSNT LL LWHRRLGHP LP VKAVL H+D SSGTINK+NFCEACAL KHH L
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
Query: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
PFSH +T YT+PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT IYFL+SKSDAFLAFQ FKTCVEKSL QSIKSLQTDGGTEFKPFK FLDQHGIE
Subjt: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
Query: HRIACPYTSK
HRI CPYTSK
Subjt: HRIACPYTSK
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| KAA0067212.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 4.7e-50 | 54.76 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
+ D+D GQVLLQGLLNDGLYKFTIQPSHKRLHHS+ NTKSVFNTVVPKSNT LL LWHRRLGHP LPTVKAVL H+D+SS
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
Query: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
AFQ FKTCVEKSL QSIKSLQTDGGTEFKPFK FLDQHGIE
Subjt: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
Query: HRIACPYTSK
HRI CPYTSK
Subjt: HRIACPYTSK
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| KAG8483654.1 hypothetical protein CXB51_023307 [Gossypium anomalum] | 2.3e-41 | 43.81 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
++D+ +VLL+G ++DGLYK ++ S + S+ + +NTV L LWH RLGHP T+ L+H + ++ C AC L K H L
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
Query: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
PF+ ++ Y+ PLQL+ D+WGPA VS NGFRYY++F DA+SRYT +YFLH+KS+ F F E+SL + +LQTDGG EF+ K +L HGI
Subjt: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
Query: HRIACPYTSK
HRI CPY+S+
Subjt: HRIACPYTSK
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-103 | 87.14 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
+KD+D GQVLLQGLLNDGLYKFTI+PSHKRLHHS NTK VFNTVVPKSNT LL LWHRRLGHP LP VKAVL H+D SSGTINK+NFCEACAL KHH L
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
Query: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
PFSH +T YT+PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT IYFL+SKSDAFLAFQ FKTCVEKSL QSIKSLQTDGGTEFKPFK FLDQHGIE
Subjt: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
Query: HRIACPYTSK
HRI CPYTSK
Subjt: HRIACPYTSK
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| XP_022156747.1 uncharacterized protein LOC111023586 [Momordica charantia] | 3.5e-45 | 45.58 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKR----LHHSEPNTKSVFNTVVPKSNTHLLH-----------LWHRRLGHP-RLPTVKAVLKHMDYSSGTIN
+KD+ GQ+L QG ++D LY+F ++ + + + + N+ ++FN+++ SN+ +LH +WHRR GH LP V+ V++ + +S
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKR----LHHSEPNTKSVFNTVVPKSNTHLLH-----------LWHRRLGHP-RLPTVKAVLKHMDYSSGTIN
Query: KMNFCEACALDKHHVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGG
C A+ K H LPF T YT PLQL+ DLWG A S NGFRY++SFVD+YS +T IYFLH+KS+AF AF FK+ VEKSL SI LQTDGG
Subjt: KMNFCEACALDKHHVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGG
Query: TEFKPFKHFLDQHGIEHRIACPYTSK
EF+ F FL HGIEHR++CPYTS+
Subjt: TEFKPFKHFLDQHGIEHRIACPYTSK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z7CE70 Integrase catalytic domain-containing protein | 5.6e-41 | 44.81 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSV-FNTVVPKS-NTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHH
+KD+ LL+G L+ GLYKF + K L + K + +++ PK L+LWH RLGHP + VK V K +S+ NFC AC L K H
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSV-FNTVVPKS-NTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHH
Query: VLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHG
LPFS + + PL+LI D+WGP+ VS +GFRYY+SFVDA+SRYT IYF K + F+ FK+ VE + IK+LQTD G EF+ FL +HG
Subjt: VLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHG
Query: IEHRIACPYTSK
I+HR+ CP+TS+
Subjt: IEHRIACPYTSK
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| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-104 | 87.14 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
+KD+D GQVLLQGLLNDGLYKFTI+PSHKRLHHS NTK VFNTVVPKSNT LL LWHRRLGHP LP VKAVL H+D SSGTINK+NFCEACAL KHH L
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
Query: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
PFSH +T YT+PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT IYFL+SKSDAFLAFQ FKTCVEKSL QSIKSLQTDGGTEFKPFK FLDQHGIE
Subjt: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
Query: HRIACPYTSK
HRI CPYTSK
Subjt: HRIACPYTSK
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| A0A5A7VFQ6 Retrotransposon protein, putative, Ty1-copia subclass | 2.3e-50 | 54.76 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
+ D+D GQVLLQGLLNDGLYKFTIQPSHKRLHHS+ NTKSVFNTVVPKSNT LL LWHRRLGHP LPTVKAVL H+D+SS
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
Query: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
AFQ FKTCVEKSL QSIKSLQTDGGTEFKPFK FLDQHGIE
Subjt: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
Query: HRIACPYTSK
HRI CPYTSK
Subjt: HRIACPYTSK
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-104 | 87.14 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
+KD+D GQVLLQGLLNDGLYKFTI+PSHKRLHHS NTK VFNTVVPKSNT LL LWHRRLGHP LP VKAVL H+D SSGTINK+NFCEACAL KHH L
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTINKMNFCEACALDKHHVL
Query: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
PFSH +T YT+PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT IYFL+SKSDAFLAFQ FKTCVEKSL QSIKSLQTDGGTEFKPFK FLDQHGIE
Subjt: PFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQHGIE
Query: HRIACPYTSK
HRI CPYTSK
Subjt: HRIACPYTSK
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| A0A6J1DSS1 uncharacterized protein LOC111023586 | 1.7e-45 | 45.58 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKR----LHHSEPNTKSVFNTVVPKSNTHLLH-----------LWHRRLGHP-RLPTVKAVLKHMDYSSGTIN
+KD+ GQ+L QG ++D LY+F ++ + + + + N+ ++FN+++ SN+ +LH +WHRR GH LP V+ V++ + +S
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKR----LHHSEPNTKSVFNTVVPKSNTHLLH-----------LWHRRLGHP-RLPTVKAVLKHMDYSSGTIN
Query: KMNFCEACALDKHHVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGG
C A+ K H LPF T YT PLQL+ DLWG A S NGFRY++SFVD+YS +T IYFLH+KS+AF AF FK+ VEKSL SI LQTDGG
Subjt: KMNFCEACALDKHHVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGG
Query: TEFKPFKHFLDQHGIEHRIACPYTSK
EF+ F FL HGIEHR++CPYTS+
Subjt: TEFKPFKHFLDQHGIEHRIACPYTSK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0C2I5 Transposon Ty1-LR2 Gag-Pol polyprotein | 7.8e-08 | 26.75 | Show/hide |
Query: HRRLGHPRLPTVKAVLKH----------MDYSSGTINKMNFCEACALDKHHVLPFSHFVTHYTY-PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT
HR L H PT++ LK+ +D+SS + C KH + S +Y P Q + D++GP N+ ++ Y+ISF D +++
Subjt: HRRLGHPRLPTVKAVLKH----------MDYSSGTINKMNFCEACALDKHHVLPFSHFVTHYTY-PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT
Query: LIYFLHS-KSDAFL-AFQNFKTCVEKSLCQSIKSLQTDGGTEF--KPFKHFLDQHGI
+Y LH + D+ L F ++ S+ +Q D G+E+ + FL+++GI
Subjt: LIYFLHS-KSDAFL-AFQNFKTCVEKSLCQSIKSLQTDGGTEF--KPFKHFLDQHGI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-16 | 31.21 | Show/hide |
Query: LWHRRLGHPRLPTVKAVLKH--MDYSSGTINKMNFCEACALDKHHVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHS
LWH+R+GH ++ + K + Y+ GT K C+ C K H + F L L+ D+ GP S G +Y+++F+D SR +Y L +
Subjt: LWHRRLGHPRLPTVKAVLKH--MDYSSGTINKMNFCEACALDKHHVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHS
Query: KSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEF--KPFKHFLDQHGIEHRIACPYT
K F FQ F VE+ + +K L++D G E+ + F+ + HGI H P T
Subjt: KSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEF--KPFKHFLDQHGIEHRIACPYT
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| Q07163 Transposon TyH3 Gag-Pol polyprotein | 6.6e-07 | 26.11 | Show/hide |
Query: HRRLGHPRLPTVKAVLKH----------MDYSSGTINKMNFCEACALDKHHVLPFSHFVTHYTY-PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT
HR L H T++ LK+ +D+SS + C KH + S +Y P Q + D++GP N+ ++ Y+ISF D +++
Subjt: HRRLGHPRLPTVKAVLKH----------MDYSSGTINKMNFCEACALDKHHVLPFSHFVTHYTY-PLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYT
Query: LIYFLHS-KSDAFL-AFQNFKTCVEKSLCQSIKSLQTDGGTEF--KPFKHFLDQHGI
+Y LH + D+ L F ++ S+ +Q D G+E+ + FL+++GI
Subjt: LIYFLHS-KSDAFL-AFQNFKTCVEKSLCQSIKSLQTDGGTEF--KPFKHFLDQHGI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.9e-26 | 32.7 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTIN---KMNFCEACALDKH
+KD++ G LLQG D LY++ I S + P++K+ ++ WH RLGHP + +V+ +YS +N K C C ++K
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTIN---KMNFCEACALDKH
Query: HVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQH
+ +PFS + T PL+ I D+W + +SH+ +RYY+ FVD ++RYT +Y L KS F FK +E I + +D G EF + QH
Subjt: HVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQH
Query: GIEHRIACPYT
GI H + P+T
Subjt: GIEHRIACPYT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.3e-26 | 33.65 | Show/hide |
Query: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTIN---KMNFCEACALDKH
+KD++ G LLQG D LY++ I S + P +K+ ++ WH RLGHP L + +V+ ++S +N K+ C C ++K
Subjt: MKDMDIGQVLLQGLLNDGLYKFTIQPSHKRLHHSEPNTKSVFNTVVPKSNTHLLHLWHRRLGHPRLPTVKAVLKHMDYSSGTIN---KMNFCEACALDKH
Query: HVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQH
H +PFS+ + PL+ I D+W + +S + +RYY+ FVD ++RYT +Y L KS F FK+ VE I +L +D G EF + +L QH
Subjt: HVLPFSHFVTHYTYPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTLIYFLHSKSDAFLAFQNFKTCVEKSLCQSIKSLQTDGGTEFKPFKHFLDQH
Query: GIEHRIACPYT
GI H + P+T
Subjt: GIEHRIACPYT
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