| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 3.3e-84 | 88 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEVEDM NIPY+SAVGSLM+AMLCTR DICYS+GIVSRYQSNP RDHWTAVKNILKYLRRT++YMLVYG+KDLILTGY DSDFQ+DKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
TSGSVFTLNGGAVVWRS K++CIADSTMEAEYVAAC+ AKEAVW +KFLTDLEVVPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| KAA0032016.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 3.3e-84 | 88.57 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEV+DMSNIPYASAVGSLM+AMLCTRSDICYS+GIVSRYQSNPERDHWTAVKNILKY RRTKDYMLV GSKDLILTGY D FQTDKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
TSGSVFTLNGGAVVWRS K+SCI DSTMEAEY+AAC+ AKE +W KKFLTDLEVVPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| KAA0046768.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-84 | 89.14 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEVEDMSNIPYASA+GSLM+AMLCTR DICYS+GIVSRYQSNP RDHWTAVKNILKY RRTKDYMLVYGSKDLILTGY DSDFQTDKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
T GSVFTLNG AVVWRS K+SCIADSTMEA YVAAC+ +KEAVW KKFLTDLEVVPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| KAA0066439.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.1e-82 | 85.56 | Show/hide |
Query: EFIYKKKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDK
E K+QC+KTPQEVEDMSNIPYAS VGSLM+AMLCTR DICYS+GIVSRYQSNP RDHWT VKNILKYLRRTKD +L+YGSKDLILTGY DS+FQTDK
Subjt: EFIYKKKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDK
Query: DARKSTSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
RKSTSGSVFTLNGGAVVWR+ K+SCIADSTMEAEYVAAC+ AKEAVW KKFLTDLEVVPNMHL ITLYCDNSGAVVNS
Subjt: DARKSTSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| TYK06386.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-84 | 89.71 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEVEDMSNIPYA AVGSLM+AMLCTR DICYS+GIVSRYQSNP RDHWT VKNILKYLRRTKDYMLVYGSKDLIL GY DSDFQTDKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
TSGSVFTLNGGAVVWRS K+SCIADSTME EYVAAC+ AKEAVW KKFLTDLE VPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TV73 Gag/pol protein | 1.6e-84 | 89.14 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEVEDMSNIPYASA+GSLM+AMLCTR DICYS+GIVSRYQSNP RDHWTAVKNILKY RRTKDYMLVYGSKDLILTGY DSDFQTDKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
T GSVFTLNG AVVWRS K+SCIADSTMEA YVAAC+ +KEAVW KKFLTDLEVVPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| A0A5A7VMA1 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 5.1e-83 | 85.56 | Show/hide |
Query: EFIYKKKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDK
E K+QC+KTPQEVEDMSNIPYAS VGSLM+AMLCTR DICYS+GIVSRYQSNP RDHWT VKNILKYLRRTKD +L+YGSKDLILTGY DS+FQTDK
Subjt: EFIYKKKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDK
Query: DARKSTSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
RKSTSGSVFTLNGGAVVWR+ K+SCIADSTMEAEYVAAC+ AKEAVW KKFLTDLEVVPNMHL ITLYCDNSGAVVNS
Subjt: DARKSTSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| A0A5D3C7T2 Gag/pol protein | 2.1e-84 | 89.71 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEVEDMSNIPYA AVGSLM+AMLCTR DICYS+GIVSRYQSNP RDHWT VKNILKYLRRTKDYMLVYGSKDLIL GY DSDFQTDKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
TSGSVFTLNGGAVVWRS K+SCIADSTME EYVAAC+ AKEAVW KKFLTDLE VPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| A0A5D3CYG9 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 1.6e-84 | 88.57 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEV+DMSNIPYASAVGSLM+AMLCTRSDICYS+GIVSRYQSNPERDHWTAVKNILKY RRTKDYMLV GSKDLILTGY D FQTDKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
TSGSVFTLNGGAVVWRS K+SCI DSTMEAEY+AAC+ AKE +W KKFLTDLEVVPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| E2GK51 Gag/pol protein (Fragment) | 1.6e-84 | 88 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
K+QC KTPQEVEDM NIPY+SAVGSLM+AMLCTR DICYS+GIVSRYQSNP RDHWTAVKNILKYLRRT++YMLVYG+KDLILTGY DSDFQ+DKDARKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
TSGSVFTLNGGAVVWRS K++CIADSTMEAEYVAAC+ AKEAVW +KFLTDLEVVPNMHLPITLYCDNSGAV NS
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAVVNS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.4e-23 | 35.8 | Show/hide |
Query: NIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYIDSDFQTDKDARKSTSGSVFTL-NG
N P S +G LM+ MLCTR D+ ++ I+SRY S + W +K +L+YL+ T D L++ K+L + GY+DSD+ + RKST+G +F + +
Subjt: NIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYIDSDFQTDKDARKSTSGSVFTL-NG
Query: GAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAV
+ W + +++ +A S+ EAEY+A + +EA+W K LT + + + PI +Y DN G +
Subjt: GAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAV
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| P0CV72 Secreted RxLR effector protein 161 | 3.2e-26 | 43.94 | Show/hide |
Query: MSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYIDSDFQTDKDARKSTSGSVFTLNGGA
M N+PY SAVG++M+ M+ TR D+ ++G++S++ S+P HW A+K +L+YL+ T+ Y L + L GY D+D+ D ++R+STSG +F LNGG
Subjt: MSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYIDSDFQTDKDARKSTSGSVFTLNGGA
Query: VVWRSTKKSCIADSTMEAEYVAACKVAKEAVW
V WRS K+ +A S+ E EY+A + +EAVW
Subjt: VVWRSTKKSCIADSTMEAEYVAACKVAKEAVW
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.3e-42 | 47.67 | Show/hide |
Query: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
KK C T +E +M+ +PY+SAVGSLM+AM+CTR DI +++G+VSR+ NP ++HW AVK IL+YLR T L +G D IL GY D+D D D RKS
Subjt: KKQCKKTPQEVEDMSNIPYASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYIDSDFQTDKDARKS
Query: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAV
++G +FT +GGA+ W+S + C+A ST EAEY+AA + KE +W K+FL +L + ++ +YCD+ A+
Subjt: TSGSVFTLNGGAVVWRSTKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGAV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-16 | 33.77 | Show/hide |
Query: YASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYIDSDFQTDKDARKSTSGSVFTLNGGAVVWRS
Y VGSL + + TR DI Y++ +S++ P +H A+K IL+YL T ++ + + L L Y D+D+ DKD ST+G + L + W S
Subjt: YASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYIDSDFQTDKDARKSTSGSVFTLNGGAVVWRS
Query: TKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGA
K+ + S+ EAEY + + E W LT+L + + P +YCDN GA
Subjt: TKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.2e-18 | 34.42 | Show/hide |
Query: YASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYIDSDFQTDKDARKSTSGSVFTLNGGAVVWRS
Y VGSL + + TR D+ Y++ +S+Y P DHW A+K +L+YL T D+ + + L L Y D+D+ D D ST+G + L + W S
Subjt: YASAVGSLMHAMLCTRSDICYSLGIVSRYQSNPERDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYIDSDFQTDKDARKSTSGSVFTLNGGAVVWRS
Query: TKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGA
K+ + S+ EAEY + + E W LT+L + + P +YCDN GA
Subjt: TKKSCIADSTMEAEYVAACKVAKEAVWFKKFLTDLEVVPNMHLPITLYCDNSGA
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