| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 6.9e-57 | 87.4 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+KSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYMV+PEG+I +DQ+QKVCKLQKSIYGLK+ASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
VAFL+LYVDDILLI NDV +LTD+KK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| KAA0043610.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-53 | 87.4 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+KSIRILLSI TFYDYEI QMDVKTAFLNGNLEESIYMV+PEG+IQK Q+QKV KLQKSIYGLK+ASRSWNIRFDTAIKSYGFE NVDEPCVYKRII S
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
TVAFLVL VD+ILLI ND+GHLT+IKK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 9.7e-59 | 92.13 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMV+PEG+IQK Q+QKVCKLQKSIYGLK+ASRSWNIRFDT IKSYGFEQNVDEPCVYKRIINS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
TVAFLVLYVDDILLI N+V HLTDIK+
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-55 | 88.98 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKT FLN NLEESIYMV+PE +IQK Q+QK+CKLQKSIYGLK+ASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
TVAFLVLYVDDILLI NDVGHL DIKK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 3.4e-56 | 85.04 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+KSIRILLSIATFYDYEIWQ+DVKTAFLNGNLEESIYM +PEG+I+K Q+QK+CK QKSIYGLK+ASRSWNIRFDTAIKSYGFEQNVD+PCVYK+++NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
VAFLVLYVDDILL+ NDVG+LTDIKK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TK28 Gag/pol protein | 5.9e-54 | 87.4 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+KSIRILLSI TFYDYEI QMDVKTAFLNGNLEESIYMV+PEG+IQK Q+QKV KLQKSIYGLK+ASRSWNIRFDTAIKSYGFE NVDEPCVYKRII S
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
TVAFLVL VD+ILLI ND+GHLT+IKK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| A0A5A7TTA2 Gag/pol protein | 4.7e-59 | 92.13 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMV+PEG+IQK Q+QKVCKLQKSIYGLK+ASRSWNIRFDT IKSYGFEQNVDEPCVYKRIINS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
TVAFLVLYVDDILLI N+V HLTDIK+
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| A0A5D3BX45 Gag/pol protein | 6.3e-56 | 88.98 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKT FLN NLEESIYMV+PE +IQK Q+QK+CKLQKSIYGLK+ASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
TVAFLVLYVDDILLI NDVGHL DIKK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| A0A5D3CDT9 Gag/pol protein | 1.7e-56 | 85.04 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+KSIRILLSIATFYDYEIWQ+DVKTAFLNGNLEESIYM +PEG+I+K Q+QK+CK QKSIYGLK+ASRSWNIRFDTAIKSYGFEQNVD+PCVYK+++NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
VAFLVLYVDDILL+ NDVG+LTDIKK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| E2GK51 Gag/pol protein (Fragment) | 3.4e-57 | 87.4 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+KSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYMV+PEG+I +DQ+QKVCKLQKSIYGLK+ASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIVNDVGHLTDIKK
VAFL+LYVDDILLI NDV +LTD+KK
Subjt: TVAFLVLYVDDILLIVNDVGHLTDIKK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.2e-20 | 42.64 | Show/hide |
Query: IKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRII
I S R +LS+ Y+ ++ QMDVKTAFLNG L+E IYM P+G I + D VCKL K+IYGLK+A+R W F+ A+K F + + C+Y K I
Subjt: IKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRII
Query: NSTVAFLVLYVDDILLIVNDVGHLTDIKK
N + +++LYVDD+++ D+ + + K+
Subjt: NSTVAFLVLYVDDILLIVNDVGHLTDIKK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.6e-26 | 47.58 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVY-KRIINSTV
SIR +LS+A D E+ Q+DVKTAFL+G+LEE IYM +PEG+ + VCKL KS+YGLK+A R W ++FD+ +KS + + +PCVY KR +
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVY-KRIINSTV
Query: AFLVLYVDDILLIVNDVGHLTDIK
L+LYVDD+L++ D G + +K
Subjt: AFLVLYVDDILLIVNDVGHLTDIK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 6.0e-11 | 35.48 | Show/hide |
Query: MDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILL
MDV TAFLN ++E IY+ +P G++ + V +L +YGLK+A WN + +K GF ++ E +Y R + ++ +YVDD+L+
Subjt: MDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDILL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-19 | 39.13 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVA
SIRI+L +A + I Q+DV AFL G L + +YM +P G+I KD+ VCKL+K++YGLK+A R+W + + + GF +V + ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVA
Query: FLVLYVDDILLIVND
++++YVDDIL+ ND
Subjt: FLVLYVDDILLIVND
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.1e-19 | 38.26 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVA
SIRI+L +A + I Q+DV AFL G L + +YM +P G++ KD+ VC+L+K+IYGLK+A R+W + T + + GF ++ + ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVRPEGYIQKDQDQKVCKLQKSIYGLKKASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVA
Query: FLVLYVDDILLIVND
++++YVDDIL+ ND
Subjt: FLVLYVDDILLIVND
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