; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0164521 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0164521
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:15139735..15140493
RNA-Seq ExpressionCmc06g0164521
SyntenyCmc06g0164521
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-13494.84Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQ AFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-13494.84Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQ AFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-13494.84Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQ AFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

TYK01597.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-13595.63Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQAAFDGLKQAMMEGP LGIADVTKPFEVETDAS+YALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPI YESRKLN AERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHLRGSEIGG VRDTLREFLQKDHAAQ VMNLVKAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]4.3e-13595.24Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQAAFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

TrEMBL top hitse value%identityAlignment
A0A5A7UXR6 Reverse transcriptase6.1e-13594.84Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQ AFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

A0A5D3BQE4 Reverse transcriptase9.4e-13695.63Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQAAFDGLKQAMMEGP LGIADVTKPFEVETDAS+YALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPI YESRKLN AERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHLRGSEIGG VRDTLREFLQKDHAAQ VMNLVKAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

A0A5D3BRZ6 Reverse transcriptase6.1e-13594.84Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQ AFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

A0A5D3C4R1 Reverse transcriptase6.1e-13594.84Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQ AFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

A0A5D3C9P8 Reverse transcriptase2.1e-13595.24Show/hide
Query:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG
        MEEGKIAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRAS LTELLKKDVHWNWDPECQAAFDGLKQA+MEGP LGIADVTKPFEVETDASDYALGG
Subjt:  MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGG

Query:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS
        +LLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS+NQAADALS
Subjt:  MLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALS

Query:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF
        RKQEHAAICLLAHL+GSEIGG VRDTLREFLQKDHAAQ VMNL KAGKTR F
Subjt:  RKQEHAAICLLAHLRGSEIGGLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.9e-3842.42Show/hide
Query:  KIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWN-WDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLL
        KI AI  + +P    E+++FLGL  YYR+F+  F+  A  +T+ LKK++  +  +PE  +AF  LK  + E P L + D TK F + TDASD ALG +L 
Subjt:  KIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWN-WDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLL

Query:  QNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALSR
        Q+GHP++Y SR LN  E  Y+  EKE+LA+V   + +R YLLG  F + +D+      +      SK  RW+  L+EFDF+ ++ KG  N  ADALSR
Subjt:  QNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALSR

P0CT34 Transposon Tf2-1 polyprotein6.9e-3540.29Show/hide
Query:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN
        I  +  W  PK+  ELR FLG  NY R+F+   S+    L  LLKKDV W W P    A + +KQ ++  P L   D +K   +ETDASD A+G +L Q 
Subjt:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN

Query:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA
              +P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE  ++ GS N  
Subjt:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA

Query:  ADALSR
        ADALSR
Subjt:  ADALSR

P0CT35 Transposon Tf2-2 polyprotein6.9e-3540.29Show/hide
Query:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN
        I  +  W  PK+  ELR FLG  NY R+F+   S+    L  LLKKDV W W P    A + +KQ ++  P L   D +K   +ETDASD A+G +L Q 
Subjt:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN

Query:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA
              +P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE  ++ GS N  
Subjt:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA

Query:  ADALSR
        ADALSR
Subjt:  ADALSR

P0CT41 Transposon Tf2-12 polyprotein6.9e-3540.29Show/hide
Query:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN
        I  +  W  PK+  ELR FLG  NY R+F+   S+    L  LLKKDV W W P    A + +KQ ++  P L   D +K   +ETDASD A+G +L Q 
Subjt:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN

Query:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA
              +P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE  ++ GS N  
Subjt:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA

Query:  ADALSR
        ADALSR
Subjt:  ADALSR

Q9UR07 Transposon Tf2-11 polyprotein6.9e-3540.29Show/hide
Query:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN
        I  +  W  PK+  ELR FLG  NY R+F+   S+    L  LLKKDV W W P    A + +KQ ++  P L   D +K   +ETDASD A+G +L Q 
Subjt:  IAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQN

Query:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA
              +P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE  ++ GS N  
Subjt:  G-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFEFEHKKGSNNQA

Query:  ADALSR
        ADALSR
Subjt:  ADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.8e-1343.02Show/hide
Query:  EEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPF
        +  K+ A+  W  PK+ +ELR FLGL  YYRRFV+ + K    LTELLKK+    W      AF  LK A+   P L + D+  PF
Subjt:  EEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGGGAAGATTGCTGCGATATGCGACTGGGCAATGCCGAAATCAGTCTCGGAGCTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGTCGATTTGTCGAGGG
ATTCTCCAAACGAGCAAGCTCGCTGACTGAACTACTGAAAAAAGACGTTCATTGGAATTGGGACCCCGAGTGCCAAGCCGCCTTTGACGGCCTAAAACAAGCCATGATGG
AGGGGCCACGTCTAGGGATTGCGGATGTGACCAAACCTTTCGAAGTCGAGACAGATGCGTCTGATTATGCGTTGGGGGGTATGCTCCTACAGAATGGACACCCGATTGCA
TACGAAAGTCGAAAATTAAATGCAGCCGAAAGGAGGTATACTGTGTCCGAAAAAGAAATGCTCGCAGTAGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTC
GACGTTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAAGAATTTCTGGCCGAGTTCGACTTTG
AATTTGAACACAAGAAGGGGTCGAACAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCTGCCATATGCCTATTAGCTCACCTCCGGGGGAGCGAGATTGGC
GGGTTGGTTAGAGACACCTTGAGAGAGTTCCTACAGAAGGATCATGCCGCTCAGTATGTCATGAATTTAGTGAAGGCGGGCAAAACACGATGGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGGGAAGATTGCTGCGATATGCGACTGGGCAATGCCGAAATCAGTCTCGGAGCTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGTCGATTTGTCGAGGG
ATTCTCCAAACGAGCAAGCTCGCTGACTGAACTACTGAAAAAAGACGTTCATTGGAATTGGGACCCCGAGTGCCAAGCCGCCTTTGACGGCCTAAAACAAGCCATGATGG
AGGGGCCACGTCTAGGGATTGCGGATGTGACCAAACCTTTCGAAGTCGAGACAGATGCGTCTGATTATGCGTTGGGGGGTATGCTCCTACAGAATGGACACCCGATTGCA
TACGAAAGTCGAAAATTAAATGCAGCCGAAAGGAGGTATACTGTGTCCGAAAAAGAAATGCTCGCAGTAGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTC
GACGTTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAAGAATTTCTGGCCGAGTTCGACTTTG
AATTTGAACACAAGAAGGGGTCGAACAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCTGCCATATGCCTATTAGCTCACCTCCGGGGGAGCGAGATTGGC
GGGTTGGTTAGAGACACCTTGAGAGAGTTCCTACAGAAGGATCATGCCGCTCAGTATGTCATGAATTTAGTGAAGGCGGGCAAAACACGATGGTTTTAG
Protein sequenceShow/hide protein sequence
MEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELLKKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQNGHPIA
YESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALSRKQEHAAICLLAHLRGSEIG
GLVRDTLREFLQKDHAAQYVMNLVKAGKTRWF