; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0164531 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0164531
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:15140554..15141678
RNA-Seq ExpressionCmc06g0164531
SyntenyCmc06g0164531
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR021109 - Aspartic peptidase domain superfamily
IPR032567 - LDOC1-related
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-20697.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-20697.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-20697.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-20697.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-20798.13Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVP EIVRVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase5.2e-20797.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

A0A5D3B7E7 Reverse transcriptase5.2e-20797.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

A0A5D3BRZ6 Reverse transcriptase5.2e-20797.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

A0A5D3C4R1 Reverse transcriptase5.2e-20797.33Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE+EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVP EI+RVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

A0A5D3C9P8 Reverse transcriptase6.1e-20898.13Show/hide
Query:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV
        MVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVI MPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVP EIVRVLEKYRDVMPDS PKSLPPRRMIDHEIELVPG KP AKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS TMEEHRDHLQKVFQKLKENQLYVKREK
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.6e-3835.09Show/hide
Query:  EIVRVLEKYRDVMPDSFPKSLP-PRRMIDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALN
        E+  + ++++D+  ++  + LP P + ++ E+EL           Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ LN
Subjt:  EIVRVLEKYRDVMPDSFPKSLP-PRRMIDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALN

Query:  KLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS
        K    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E  +  VV Y+DDI+++S
Subjt:  KLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS

Query:  MTMEEHRDHLQKVFQKLKENQLYVKREK
         +  EH  H++ V QKLK   L + + K
Subjt:  MTMEEHRDHLQKVFQKLKENQLYVKREK

P0CT41 Transposon Tf2-12 polyprotein2.6e-3835.09Show/hide
Query:  EIVRVLEKYRDVMPDSFPKSLP-PRRMIDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALN
        E+  + ++++D+  ++  + LP P + ++ E+EL           Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ LN
Subjt:  EIVRVLEKYRDVMPDSFPKSLP-PRRMIDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALN

Query:  KLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS
        K    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E  +  VV Y+DDI+++S
Subjt:  KLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYS

Query:  MTMEEHRDHLQKVFQKLKENQLYVKREK
         +  EH  H++ V QKLK   L + + K
Subjt:  MTMEEHRDHLQKVFQKLKENQLYVKREK

P31843 RNA-directed DNA polymerase homolog1.4e-4771.88Show/hide
Query:  SLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKF
        SLR+CIDYRAL K+T++NKYP+P + DLFDRL  A +F+KLDLRSGY+QVRIA+GDEPKTTCVTRYG+FEF VMPFGLTNA ATFC LMN V +EYLD F
Subjt:  SLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKF

Query:  VVVYLDDIVV---YSMTMEEHRDHLQKV
        VVVYLDD+VV   YS ++ EH  HL+ V
Subjt:  VVVYLDDIVV---YSMTMEEHRDHLQKV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.4e-4439.53Show/hide
Query:  TFMAIPLNSSENSG-ETVPTEIVRVLEKYRDVMPDSFPKSLPPRRM------IDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP
        T  ++  N++++S  +T  T  V + +KYR+++ +     LPPR        + H+IE+ PG +      Y +      E+ K + +LL+  FI P+K+P
Subjt:  TFMAIPLNSSENSG-ETVPTEIVRVLEKYRDVMPDSFPKSLPPRRM------IDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP

Query:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT
          +PV+   KKDG+ RLC+DYR LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF  
Subjt:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT

Query:  LMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
         M   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   L VK++K
Subjt:  LMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.4e-4439.53Show/hide
Query:  TFMAIPLNSSENSG-ETVPTEIVRVLEKYRDVMPDSFPKSLPPRRM------IDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP
        T  ++  N++++S  +T  T  V + +KYR+++ +     LPPR        + H+IE+ PG +      Y +      E+ K + +LL+  FI P+K+P
Subjt:  TFMAIPLNSSENSG-ETVPTEIVRVLEKYRDVMPDSFPKSLPPRRM------IDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP

Query:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT
          +PV+   KKDG+ RLC+DYR LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF  
Subjt:  YGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCT

Query:  LMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK
         M   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   L VK++K
Subjt:  LMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACTCCGGTGCTACCCACAATTTCATAACAGAAATAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGCTGTGAATTCT
GCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTAGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTG
GTACTAGGAATGGAGTTCCTACTCGAACATCAGGTAATCCTAATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTA
CGTCAGCCAGATGGGCTGAAAATGATCTCCGCCATGCAATTAAAGAAGGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCGTCAGAGAAC
TCAGGGGAGACAGTCCCTACGGAGATCGTACGCGTACTAGAGAAGTACCGTGATGTGATGCCTGATAGTTTTCCCAAGTCTTTGCCACCTCGGAGAATGATTGAT
CATGAGATCGAGTTGGTGCCAGGGACAAAACCGCGTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTG
AATGCAGGGTTCATTAGGCCTGCAAAAGCTCCGTATGGGGCCCCGGTTCTTTTCCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGCCCTG
AATAAACTCACGGTTCGCAACAAGTATCCTCTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGTGCGAAATATTTTTCAAAGTTAGACTTGCGGTCGGGG
TACTACCAAGTAAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCC
CCTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTATGACCATGGAG
GAACATAGAGACCACCTGCAAAAGGTTTTTCAAAAATTAAAAGAGAATCAGCTGTATGTCAAAAGAGAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACTCCGGTGCTACCCACAATTTCATAACAGAAATAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGCTGTGAATTCT
GCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTAGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTG
GTACTAGGAATGGAGTTCCTACTCGAACATCAGGTAATCCTAATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTA
CGTCAGCCAGATGGGCTGAAAATGATCTCCGCCATGCAATTAAAGAAGGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCGTCAGAGAAC
TCAGGGGAGACAGTCCCTACGGAGATCGTACGCGTACTAGAGAAGTACCGTGATGTGATGCCTGATAGTTTTCCCAAGTCTTTGCCACCTCGGAGAATGATTGAT
CATGAGATCGAGTTGGTGCCAGGGACAAAACCGCGTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTG
AATGCAGGGTTCATTAGGCCTGCAAAAGCTCCGTATGGGGCCCCGGTTCTTTTCCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGCCCTG
AATAAACTCACGGTTCGCAACAAGTATCCTCTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGTGCGAAATATTTTTCAAAGTTAGACTTGCGGTCGGGG
TACTACCAAGTAAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCC
CCTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTATGACCATGGAG
GAACATAGAGACCACCTGCAAAAGGTTTTTCAAAAATTAAAAGAGAATCAGCTGTATGTCAAAAGAGAAAAATGA
Protein sequenceShow/hide protein sequence
MVDSGATHNFITEIEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSVVQTDL
RQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELAELRKQLDELL
NAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNA
PATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREK