; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0164651 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0164651
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr06:15433539..15436277
RNA-Seq ExpressionCmc06g0164651
SyntenyCmc06g0164651
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL

Query:  ESLGLRDMPHLT
        ESLGLRDMPHLT
Subjt:  ESLGLRDMPHLT

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL

Query:  ESLGLRDMPHLT
        ESLGLRDMPHLT
Subjt:  ESLGLRDMPHLT

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL

Query:  ESLGLRDMPHLT
        ESLGLRDMPHLT
Subjt:  ESLGLRDMPHLT

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL

Query:  ESLGLRDMPHLT
        ESLGLRDMPHLT
Subjt:  ESLGLRDMPHLT

A0A5A7TZD7 Gag/pol protein0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL

Query:  ESLGLRDMPHLT
        ESLGLRDMPHLT
Subjt:  ESLGLRDMPHLT

A0A5A7UGV2 Gag/pol protein0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK

A0A5D3CPJ6 Gag/pol protein0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHL

Query:  ESLGLRDMPHLT
        ESLGLRDMPHLT
Subjt:  ESLGLRDMPHLT

A0A5D3CSZ6 Gag/pol protein0.0e+00100Show/hide
Query:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
        MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY
Subjt:  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEY

Query:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
        FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt:  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY

Query:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
        AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Subjt:  AHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL

Query:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
        EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD
Subjt:  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVD

Query:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
        KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD
Subjt:  KDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMD

Query:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
        VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT
Subjt:  VKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLT

Query:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
        DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML
Subjt:  DIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAML

Query:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
        CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE
Subjt:  CTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAE

Query:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
        YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
Subjt:  YVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.6e-14032.41Show/hide
Query:  KENAHLWHLRLGHINLNRIERLVKNGLLSELE-----ENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
        K N  LWH R GHI+  ++  + +  + S+       E S  +CE CL GK  + PF     K H  K PL +VHSD+CGP+         YF+ F D +
Subjt:  KENAHLWHLRLGHINLNRIERLVKNGLLSELE-----ENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY

Query:  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFW
        + Y   YL+++KS+    F+++ A+ E   +  +     D G EY+  + + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  SFW
Subjt:  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFW

Query:  GYAVQTAVYILNCVPSKSV---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG--------------------------
        G AV TA Y++N +PS+++   S+TP ++W+ +K  L+H R++G   +V ++N   K + +S   +FVGY P G                          
Subjt:  GYAVQTAVYILNCVPSKSV---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG--------------------------

Query:  TRGGYFYD--------------PKDNKVFVST----------NATFLEEDHIREHK----PRSKIVLNELS------------KETTEPSTRVVEEPSAL
        +R   F                P D++  + T          N  FL++    E+K       KI+  E              K++ E +   + E    
Subjt:  TRGGYFYD--------------PKDNKVFVST----------NATFLEEDHIREHK----PRSKIVLNELS------------KETTEPSTRVVEEPSAL

Query:  TRVVHVGSSTRTHQPQSLREP------------------------RRSGRVTNLP-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIKAM
         R  H+  S  +  P   RE                         RRS R+   P I Y     +L   V++   I  + P +F +     DK  W +A+
Subjt:  TRVVHVGSSTRTHQPQSLREP------------------------RRSGRVTNLP-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIKAM

Query:  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNG
        N EL +   N+ W +  +P+    +  +W++  K    G    +KARLVA+G+TQ   +DYEETF+PVA + S R +LS+   ++ ++ QMDVKTAFLNG
Subjt:  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNG

Query:  NLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQW
         L+E IYM+ P+G  I      +CKLN++IYGLKQA+R W   F+ A+K   F     + C+Y   K  IN+++ +++LYVDD+++   D+  + + K++
Subjt:  NLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQW

Query:  LATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLC
        L  +F+M DL E +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N      P      + +  S E C           + P  S +G LMY MLC
Subjt:  LATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLC

Query:  TRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLI----LTGYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADST
        TRPD+  AV I+SRY S      W  +K +L+YL+ T D  L++  K+L     + GY DSD+      RKST+G +F + +   + W + +Q  +A S+
Subjt:  TRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLI----LTGYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADST

Query:  MEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVF
         EAEY+A  EA +EA+WL+  L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE V    + +  I + + +AD FTKPL A  F
Subjt:  MEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVF

Query:  EGHLESLGL
            + LGL
Subjt:  EGHLESLGL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.5e-20141.2Show/hide
Query:  LWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKS
        LWH R+GH++   ++ L K  L+S  +  ++  C+ CL GK  +  F     R    L+LV+SD+CGPM +++ GG +YF+TF DD SR  +VY+++ K 
Subjt:  LWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKS

Query:  EALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNC
        +  + F+++ A VE    + +K  RSD GGEY   +F+ Y    GI  + + PGTPQ NGV+ER NRT+++ VRSM+  A LP SFWG AVQTA Y++N 
Subjt:  EALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNC

Query:  VPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNE
         PS  ++ E P ++W  ++ S  H +++GC   AHV +    KL+ +S  C+F+GY     G   +DP   KV  S +  F  E  +R     S+ V N 
Subjt:  VPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNE

Query:  L----------------SKETTEPSTRVVEEP-----------SALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLT
        +                ++ TT+  +   E+P             +  V H       HQP      RRS R      RY S TE + +  D    +P +
Subjt:  L----------------SKETTEPSTRVVEEP-----------SALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLT

Query:  FKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAY
         K+ +   +K++ +KAM  E+ES+  N  + LV+ P G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++E FSPV  + SIR +LS+AA 
Subjt:  FKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAY

Query:  FDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDIL
         D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++  +CKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY KR    +   L+LYVDD+L
Subjt:  FDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDIL

Query:  LIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYAS
        ++G D GL+  +K  L+  F MKDLG AQ +LG++I R+R ++ L LSQ  YI++++ +++M+N+K    P    + LSK+ CP T ++   M  +PY+S
Subjt:  LIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYAS

Query:  AVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
        AVGSLMYAM+CTRPDI +AVG+VSR+  NPG  HW AVK IL+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q 
Subjt:  AVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG

Query:  CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKP
        C+A ST EAEY+AA E  KE +WL+ FL +L +     K   +YCD+  A+  S+    H R KHI+ +YH IRE+V    + V +I++  N AD  TK 
Subjt:  CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKP

Query:  LTAKVFEGHLESLGL
        +    FE   E +G+
Subjt:  LTAKVFEGHLESLGL

Q12269 Transposon Ty1-GR2 Gag-Pol polyprotein1.4e-3721.78Show/hide
Query:  HLRLGHINLNRIERLVKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRY
        H  L H N   I   +KN  ++   E+ +         C  CL GK TK     KG R K     EP + +H+D+ GP++        YFI+FTD+ +++
Subjt:  HLRLGHINLNRIERLVKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRY

Query:  GYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWG
         +VY +  + E   L+ F    A ++N    ++   + DRG EY +     +L + GI    +     + +GV+ER NRTLLD  R+ +  + LPN  W 
Subjt:  GYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWG

Query:  YAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL-------
         A++ +  + N + S   S+   +   G  G  +     +G P  V ++NP  K+ PR      +   + + G   Y P   K   +TN   L       
Subjt:  YAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL-------

Query:  --------------------------------------EEDH-----IREHKPRSKIVLNELSKET--------TEPSTRVVEEPSALTRVVH-------
                                              E DH     I  H  + + VL++    T        TE S RV +      R V        
Subjt:  --------------------------------------EEDH-----IREHKPRSKIVLNELSKET--------TEPSTRVVEEPSALTRVVH-------

Query:  -VGSSTRTHQPQ-SLREPRRSGRV-----------------------------------------TNLPIRYMSLTETLTV--ISDGDIE----------
         + S  R+  PQ S  E   SG +                                         TN+PI     T   TV  ISD + E          
Subjt:  -VGSSTRTHQPQ-SLREPRRSGRV-----------------------------------------TNLPIRYMSLTETLTV--ISDGDIE----------

Query:  -------------------------------------------------DPL----------------------------TFKKAMED------VDKDEW
                                                         DP                             + K+++ED      V +D W
Subjt:  -------------------------------------------------DPL----------------------------TFKKAMED------VDKDEW

Query:  ------------------------------------------------------IKAMNLELESMYFNSVWDL-----VDQPDGVKPIGCKWIYKRKRGA
                                                              I+A + E+  +   + WD        + D  + I   +I+ RKR  
Subjt:  ------------------------------------------------------IKAMNLELESMYFNSVWDL-----VDQPDGVKPIGCKWIYKRKRGA

Query:  DGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQAS
        DG   T KAR VA+G  Q          S      ++   LS+A   +Y I Q+D+ +A+L  +++E +Y++ P      G   K+ +L +S+YGLKQ+ 
Subjt:  DGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQAS

Query:  RSWNIRFDT-AIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMK--DLGEAQ-----FVLGIQIFRDRKNKMLAL
         +W     +  IK  G +++    CV+K     S   + L+VDD++L   D+     I   L  Q+  K  +LGE+       +LG++I + ++ K + L
Subjt:  RSWNIRFDT-AIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMK--DLGEAQ-----FVLGIQIFRDRKNKMLAL

Query:  SQASYIDKIVVKYSMQNSKRG---LLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKY
           + + + + K ++  + +G     P + G+ + +++      + +E  H      +G   Y     R D+ Y +  ++++   P          ++++
Subjt:  SQASYIDKIVVKYSMQNSKRG---LLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKY

Query:  LRRTRDYTLVYGSK-----DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
        +  TRD  L++        D  L   +D+ +  ++   KS  G++F LNG  +  +S K      ST EAE      A  EA+ L N L  L    N  K
Subjt:  LRRTRDYTLVYGSK-----DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK

Query:  PIT--LYCDNSGAVANSREPRSHK-RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFE
        PI   L  D+   ++  +     K R +    K   +R+ V   ++ V  I +  N+AD  TKPL  K F+
Subjt:  PIT--LYCDNSGAVANSREPRSHK-RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.3e-11829.62Show/hide
Query:  SPKENAHLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGY
        S K     WH RLGH   + +  ++ N  LS L   +    C  CL  K  K PF+     +  PLE ++SD+     + +   + Y++ F D ++RY +
Subjt:  SPKENAHLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGY

Query:  VYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
        +Y ++ KS+  E F  +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+SER++R +++   +++S+A +P ++W YA  
Subjt:  VYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ

Query:  TAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE--------
         AVY++N +P+  +  E+P +   G   +    R++GC  +  +   N  KL+ +S+ C+F+GY            + +++++S +  F E         
Subjt:  TAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE--------

Query:  ---DHIREHKPRSKIVLNELSKETTEPSTRVV----------------EEPSALTRVVHVGSS----------------------------------TRT
             ++E +  S  V    S  TT P+   V                  PSA  R   V SS                                  T+T
Subjt:  ---DHIREHKPRSKIVLNELSKETTEPSTRVV----------------EEPSALTRVVHVGSS----------------------------------TRT

Query:  HQ-----------------PQSLREPRRSGRVTNLPIRYMSLTET--------------LTVISDGDIEDPLTF--------------------------
        H                   QSL  P +S   +  P    S + T              L  I + + + PL                            
Subjt:  HQ-----------------PQSLREPRRSGRVTNLPIRYMSLTET--------------LTVISDGDIEDPLTF--------------------------

Query:  ----KKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS
            + A++ +  + W  AM  E+ +   N  WDLV  P   V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L 
Subjt:  ----KKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS

Query:  IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVD
        +A    + I Q+DV  AFL G L + +YM QP GFI   +   +CKL +++YGLKQA R+W +     + + GF   V +  ++     KS+ ++++YVD
Subjt:  IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVD

Query:  DILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIP
        DIL+ GND  LL +    L+ +F +KD  E  + LGI+    R    L LSQ  YI  ++ + +M  +K    P      LS     K     E      
Subjt:  DILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIP

Query:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRS
        Y   VGSL Y +  TRPDI YAV  +S++   P   H  A+K IL+YL  T ++ + +     L L  Y+D+D+  D+D   ST+G +  L    + W S
Subjt:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADP
         KQ  +  S+ EAEY +    + E  W+ + L +L +   +++P  +YCDN GA      P  H R KHI   YH IR  V  G + V  +++   +AD 
Subjt:  IKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADP

Query:  FTKPLTAKVFEGHLESLGLRDMP
         TKPL+   F+     +G+  +P
Subjt:  FTKPLTAKVFEGHLESLGLRDMP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-11729.31Show/hide
Query:  WHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKS
        WH RLGH +L  +  ++ N  L  L   + L  C  C   K  K PF+     + +PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS
Subjt:  WHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKS

Query:  EALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNC
        +  + F  +K+ VEN     I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SER++R +++M  +++S+A +P ++W YA   AVY++N 
Subjt:  EALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNC

Query:  VPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---------DHIREHK
        +P+  +  ++P +   G+  +    +++GC  +  +   N  KLE +SK C F+GY               +++ S +  F E                +
Subjt:  VPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---------DHIREHK

Query:  PRSKIVLNELSKETTEPSTRVV------------------EEPSAL-----------------------TRVVHVG--SSTRTHQPQ-------------
         RS    N  S  TT P+T +V                    PS L                       T   H G   + + HQ Q             
Subjt:  PRSKIVLNELSKETTEPSTRVV------------------EEPSAL-----------------------TRVVHVG--SSTRTHQPQ-------------

Query:  ----SLREPRRSGRVTNLPIRYMSLTETLTVISDGDI----------------------------------------------------------EDPLT
            S   P ++  +   PI    +    T IS+ +                                                            +P T
Subjt:  ----SLREPRRSGRVTNLPIRYMSLTETLTVISDGDI----------------------------------------------------------EDPLT

Query:  FKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
          +AM+D   D W +AM  E+ +   N  WDLV   P  V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L +A 
Subjt:  FKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA

Query:  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDIL
           + I Q+DV  AFL G L + +YM QP GF+   +   +C+L ++IYGLKQA R+W +   T + + GF   + +  ++     +S+ ++++YVDDIL
Subjt:  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDIL

Query:  LIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYAS
        + GND  LL      L+ +F +K+  +  + LGI+    R  + L LSQ  Y   ++ + +M  +K    P      L+     K P   E      Y  
Subjt:  LIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYAS

Query:  AVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQ
         VGSL Y +  TRPD+ YAV  +S+Y   P   HW A+K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ
Subjt:  AVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQ

Query:  GCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
          +  S+ EAEY +    + E  W+ + L +L +   +S P  +YCDN GA      P  H R KHI   YH IR  V  G + V  +++   +AD  TK
Subjt:  GCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK

Query:  PLTAKVFEGHLESLGLRDMP
        PL+   F+     +G+  +P
Subjt:  PLTAKVFEGHLESLGLRDMP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.7e-8335.54Show/hide
Query:  EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILL
        ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +DG ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L
Subjt:  EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILL

Query:  SIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFL
        +I+A +++ + Q+D+  AFLNG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF Q   +   + +I       +
Subjt:  SIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFL

Query:  VLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE
        ++YVDDI++  N+   + ++K  L + F+++DLG  ++ LG++I R      + + Q  Y   ++ +  +   K   +P    VT S      +  D  +
Subjt:  VLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE

Query:  MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA
         +   Y   +G LMY  + TR DI +AV  +S++   P LAH  AV  IL Y++ T    L Y S+ ++ L  ++D+ FQ+ +D+R+ST+G    L    
Subjt:  MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGA

Query:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE
        + W+S KQ  ++ S+ EAEY A   A  E +WL  F  +L++   +SKP  L+CDN+ A+  +     H+R KHIE   H +RE
Subjt:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE

ATMG00300.1 Gag-Pol-related retrotransposon family protein3.1e-1139.53Show/hide
Query:  TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNV
        T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE C+ GK  +  F+   H  K PL+ VHSDL G  +V
Subjt:  TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNV

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.6e-0735.37Show/hide
Query:  NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSK
        NRT+++ VRSM+    LP +F   A  TAV+I+N  PS +++   P ++W     +  + R +GC A++   +  KL+PR+K
Subjt:  NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSK

ATMG00810.1 DNA/RNA polymerases superfamily protein3.5e-2334.32Show/hide
Query:  FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQ
        +L+LYVDDILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ  Y ++I+    M + K     LP +   ++S  + P  P 
Subjt:  FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQ

Query:  DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTL
        D        + S VG+L Y  L TRPDI YAV IV +    P LA +  +K +L+Y++ T  + L ++ +  L +  + DSD+     +R+ST+G    L
Subjt:  DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTL

Query:  NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW
            + W + +Q  ++ S+ E EY A    A E  W
Subjt:  NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)7.0e-1637.4Show/hide
Query:  RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVA
        R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N  W LV  P     +GCKW++K K  +DG +   KARLVA
Subjt:  RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVA

Query:  KGYTQVEGVDYEETFSPVAMLKSIRILLSIA
        KG+ Q EG+ + ET+SPV    +IR +L++A
Subjt:  KGYTQVEGVDYEETFSPVAMLKSIRILLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATT
GAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGA
AAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACT
GATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAA
ACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGT
ACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTAT
GCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTC
AGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGT
GGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTA
TTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACAT
CAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGAC
ATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTC
TGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGA
CTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCA
TATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCA
GGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGA
TTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGAT
ATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGT
AAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGA
GTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTA
TGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTT
AGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACT
TCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGT
GAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCT
GTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACA
CAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACAT
TTAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATT
GAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGA
AAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACT
GATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAA
ACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGT
ACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTAT
GCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTC
AGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGT
GGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTA
TTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACAT
CAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGAC
ATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTC
TGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGA
CTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCA
TATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCA
GGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGA
TTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGAT
ATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGT
AAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGA
GTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTA
TGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTT
AGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACT
TCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGT
GAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCT
GTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACA
CAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACAT
TTAACCTAG
Protein sequenceShow/hide protein sequence
MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFT
DDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGY
AVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIV
LNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIP
GQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDR
KNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYL
RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGA
VANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT