CuGenDBv2

Gene ID	Cmc06g0165061
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr06:16358887..16361172
RNA-Seq Expression	Cmc06g0165061
Synteny	Cmc06g0165061
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

KAA0037582.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

KAA0041108.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

TYK01991.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

A0A5A7U2V7 Reverse transcriptase

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

A0A5A7UNA3 Reverse transcriptase

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

A0A5A7UUL6 Reverse transcriptase

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

A0A5D3BHI1 Reverse transcriptase

0.0e+00

95.83

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLC DYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
        TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRI+LQTLREKQLYAKFSK                +KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
        VS DPQKVEAV NWERPISATEVRSFLGLAGY RRF+EDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILAL VTGKDYVIY DASRLGL
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
        GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVA A
Subjt:  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
        LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK
Subjt:  LSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELK

Query:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL
        NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQR GGFLNPLPVPE KW+HITMDFLFGLPRTSSGHDGIWVIVDRL
Subjt:  NAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRL

Query:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
        TKTTRFIPIKMTS LDQLARLYVDKIVSQYGVP+SIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL
Subjt:  TKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL

Query:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
        PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV
Subjt:  PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

5.2e-115

30.66

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+  DY+ LNK    N YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ +LQ L+   L    +K                 KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
         +   + ++ V  W++P +  E+R FLG   Y R+F+   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVAFALSR----KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +A ALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVAFALSR----KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +  G L P+P  E  W+ ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   +   +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALY
               +W  H+ L++ +YNN   S+  M P+E ++
Subjt:  CVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALY

P0CT35 Transposon Tf2-2 polyprotein

5.2e-115

30.66

Show/hide

Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+  DY+ LNK    N YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ +LQ L+   L    +K                 KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
         +   + ++ V  W++P +  E+R FLG   Y R+F+   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVAFALSR----KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +A ALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVAFALSR----KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +  G L P+P  E  W+ ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   +   +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALY
               +W  H+ L++ +YNN   S+  M P+E ++
Subjt:  CVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALY

P0CT41 Transposon Tf2-12 polyprotein

5.2e-115

30.66

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Query:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK
        + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+  DY+ LNK    N YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K
Subjt:  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAK

Query:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG
         AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ +LQ L+   L    +K                 KG
Subjt:  TAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSK----------------SKG

Query:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL
         +   + ++ V  W++P +  E+R FLG   Y R+F+   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Subjt:  VSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGL

Query:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP
        G VL Q  +      + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y P
Subjt:  GCVLMQDGN-----VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHP

Query:  GKANVVAFALSR----KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK
        G AN +A ALSR       +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  
Subjt:  GKANVVAFALSR----KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVK

Query:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTS
        + ++ +PN ++L   I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +  G L P+P  E  W+ ++MDF+  LP  S
Subjt:  QGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTS

Query:  SGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA
        SG++ ++V+VDR +K    +P   +   +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR 
Subjt:  SGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRA

Query:  CVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALY
               +W  H+ L++ +YNN   S+  M P+E ++
Subjt:  CVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

1.1e-117

35.72

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Query:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTR
        +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC DYR LNK TI + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T 
Subjt:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTR

Query:  YGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSKSKGVSADPQ----------------
         G YE+ VMPFGL NAP+ F   M   F     +FV V++DDIL++S   E H +HL  +L+ L+ + L  K  K K  S + +                
Subjt:  YGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSKSKGVSADPQ----------------

Query:  KVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGLGCVLMQ
        K  A+ ++  P +  + + FLG+  Y RRF+ + S++A P+        K +W++K +++ ++LK  L  +P+L       +Y +  DAS+ G+G VL +
Subjt:  KVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGLGCVLMQ

Query:  DGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
          N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +R+ L G+   + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVA A
Subjt:  DGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSR------------------KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS---KKGLEVEFEL
        +SR                  KS      LC   +  + EL  ++  VT ED                      S   + QKK E S   +K   +E E+
Subjt:  LSR------------------KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS---KKGLEVEFEL

Query:  RTDGAIVKQGRLCVPNISELKNAILEEAHS-SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMD
             I  Q RL VP   + +NA++   H  + +  H G T     +   Y+W  ++  I +Y+  C+ CQ +K  R RL G L PLP+ E +W  I+MD
Subjt:  RTDGAIVKQGRLCVPNISELKNAILEEAHS-SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMD

Query:  FLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTI
        F+ GLP TS+  + I V+VDR +K   FI  + T    QL  L    I S +G P +I SDRD R T+  +  L K +G     S++ HPQTDGQSERTI
Subjt:  FLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTI

Query:  QTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTP
        QTL  +LRA V     +W  +LP +EF YN+    ++G +P+E   G    TP
Subjt:  QTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTP

Q99315 Transposon Ty3-G Gag-Pol polyprotein

5.5e-117

35.59

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Query:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTR
        +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC DYR LNK TI + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T 
Subjt:  KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTR

Query:  YGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSKSKGVSADPQ----------------
         G YE+ VMPFGL NAP+ F   M   F     +FV V++DDIL++S   E H +HL  +L+ L+ + L  K  K K  S + +                
Subjt:  YGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSKSKGVSADPQ----------------

Query:  KVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGLGCVLMQ
        K  A+ ++  P +  + + FLG+  Y RRF+ + S++A P+        K +W++K +++  +LK  L  +P+L       +Y +  DAS+ G+G VL +
Subjt:  KVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGLGCVLMQ

Query:  DGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA
          N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +R+ L G+   + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVA A
Subjt:  DGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFA

Query:  LSR------------------KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS---KKGLEVEFEL
        +SR                  KS      LC   +  + EL  ++  VT ED                      S   + QKK E S   +K   +E E+
Subjt:  LSR------------------KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS---KKGLEVEFEL

Query:  RTDGAIVKQGRLCVPNISELKNAILEEAHS-SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMD
             I  Q RL VP   + +NA++   H  + +  H G T     +   Y+W  ++  I +Y+  C+ CQ +K  R RL G L PLP+ E +W  I+MD
Subjt:  RTDGAIVKQGRLCVPNISELKNAILEEAHS-SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMD

Query:  FLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTI
        F+ GLP TS+  + I V+VDR +K   FI  + T    QL  L    I S +G P +I SDRD R T+  +  L K +G     S++ HPQTDGQSERTI
Subjt:  FLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTI

Query:  QTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTP
        QTL  +LRA       +W  +LP +EF YN+    ++G +P+E   G    TP
Subjt:  QTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

5.1e-17

38.21

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Query:  HLRIILQTLREKQLYAKFSK------------------SKGVSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEW
        HL ++LQ   + Q YA   K                   +GVSADP K+EA+  W  P + TE+R FLGL GY RRFV+++ ++  PLT L +KN   +W
Subjt:  HLRIILQTLREKQLYAKFSK------------------SKGVSADPQKVEAVFNWERPISATEVRSFLGLAGYCRRFVEDFSRLALPLTALTRKNVKFEW

Query:  SDKCEQSFQELKKRLVTAPILAL
        ++    +F+ LK  + T P+LAL
Subjt:  SDKCEQSFQELKKRLVTAPILAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTT
GTGAAAAAGAAAGATGGTACCCTCAGATTATGTACTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTT
GATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAAACGGCATTTAGAACG
AGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAG
TTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTATTCTACAGACTCTACGTGAAAAACAGTTA
TACGCTAAGTTCAGCAAATCAAAAGGAGTTAGTGCCGATCCACAAAAAGTAGAAGCGGTTTTCAATTGGGAAAGACCAATTAGTGCCACAGAAGTACGTAGTTTC
CTGGGTTTGGCAGGATACTGTAGGCGTTTTGTTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGAT
AAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCTTGTAACAGGGAAGGACTATGTGATTTATTATGATGCTTCA
AGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATCGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAG
CTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAA
AAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCATTTGCATTA
AGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGA
AGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCTGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAA
GGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGTGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAA
GCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATAT
GTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGGCTAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTTGAAATGGCAGCATATTACT
ATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGATTAAAATG
ACATCTATGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAATGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCT
AAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTA
GAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAACAATAACTATCAGTCTAGTATCGGT
ATGGCACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGAGAAAATCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCTDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRT
RYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIILQTLREKQLYAKFSKSKGVSADPQKVEAVFNWERPISATEVRSF
LGLAGYCRRFVEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALLVTGKDYVIYYDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLE
LAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAFALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSG
SLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEY
VDRCLICQQVKPVRQRLGGFLNPLPVPELKWQHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSMLDQLARLYVDKIVSQYGVPMSIVSDRDPRFTS
KFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVEKI

Cmc06g0165061 (gene) of Melon (Charmono) v1.1 genome