; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0165071 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0165071
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:16364615..16366279
RNA-Seq ExpressionCmc06g0165071
SyntenyCmc06g0165071
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032541.1 pol protein [Cucumis melo var. makuwa]1.6e-28688.69Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHYLYSEKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQ NDPYL +KRR+VETGQGEDFSIS+DDGL FEG LCV +D+AVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVK+PRQ PAGL+Q LSV GWKWESVSMDFI GLP+TLKGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

KAA0040942.1 pol protein [Cucumis melo var. makuwa]1.6e-28688.87Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VV ALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSISSDDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+TLKG+TVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVG FEILERIGP+AYRLALPPS   VHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

KAA0045309.1 pol protein [Cucumis melo var. makuwa]1.8e-28789.05Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV D+LS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSISSDDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+TLKGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLAL TRLDFST FHPQTDGQTERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKV PMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

KAA0060745.1 pol protein [Cucumis melo var. makuwa]9.1e-28789.23Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSIS DDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSS FTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+TLKGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQ ERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

KAA0063098.1 pol protein [Cucumis melo var. makuwa]3.5e-28688.69Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK+HEQNYPTHDLEL  VVFALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EI VSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSISSDDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+T KGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLR  VLEFS SWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTN AIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KK 
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

TrEMBL top hitse value%identityAlignment
A0A5A7SSL3 Reverse transcriptase7.5e-28788.69Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHYLYSEKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQ NDPYL +KRR+VETGQGEDFSIS+DDGL FEG LCV +D+AVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVK+PRQ PAGL+Q LSV GWKWESVSMDFI GLP+TLKGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

A0A5A7TBV4 Pol protein7.5e-28788.87Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VV ALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSISSDDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+TLKG+TVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVG FEILERIGP+AYRLALPPS   VHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

A0A5A7TVN9 Reverse transcriptase8.9e-28889.05Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV D+LS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSISSDDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+TLKGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLAL TRLDFST FHPQTDGQTERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKV PMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

A0A5A7V4E4 Reverse transcriptase4.4e-28789.23Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EIAVSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSIS DDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSS FTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+TLKGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQ ERLNQILEDMLR  VLEFSGSWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTNAAIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KKG
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

A0A5A7V646 Reverse transcriptase1.7e-28688.69Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK
        MQQGKVVAYASRQLK+HEQNYPTHDLEL  VVFALKIWRHYLY EKIQI+T HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVV DALS+K
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKK

Query:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM
        VAHSAALI+KQ PLLRDF+R EI VSV EVT+QLAQLSVQPT+RQ+II AQLNDPYL +KRR+VETGQGEDFSISSDDGL FEG LCV +DSAVKTELL 
Subjt:  VAHSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLM

Query:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH
        EAHSSPFTM+PGSTKMYQDLR VYWWR MK+EVADF+SRCLVCQQVKAPRQ PAGLLQPLSV GWKWESVSMDFI GLP+T KGYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAH

Query:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF
        F+PGKSTYTASKWGQLY+TEIV+LHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLR  VLEFS SWDSH HLMEF
Subjt:  FIPGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEF

Query:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG
        AYNNSYQATI MAPFEALYGKCCRSP+CW EVGEQRMLG ELVQTTN AIQKIRARMLTAQSR KSY DVRR DLEFEVGDMVFLKVAPMKGVLRF KK 
Subjt:  AYNNSYQATIDMAPFEALYGKCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP
         LSP FVGPFEILERIGP+AYRLALPPS  AVHDVFH+SMLR+YVADP
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSLFAVHDVFHVSMLRRYVADP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.7e-6529.17Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA
        V Y S ++   + NY   D E++ ++ +LK WRHYL S  E  +I T H++L    T +    N R  RW   ++D++ EI Y P  AN + DALS+   
Subjt:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA

Query:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA
            ++ +  P+ +D        S +   + + Q+S+    + +++    ND  L+      +    E+  +     +  +  + +  D+ +   ++ + 
Subjt:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA

Query:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI
        H     ++PG   +   +   + W+ ++K++ +++  C  CQ  K+   +P G LQP+      WES+SMDFI  LP +  GY  ++VVVDR +K A  +
Subjt:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI

Query:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY
        P   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H  L++ +Y
Subjt:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY

Query:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG
        NN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++  ++ EF+ GD+V +K     G L   K  
Subjt:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY
         L+P F GPF +L++ GP  Y L LP S+       FHVS L +Y
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY

P0CT35 Transposon Tf2-2 polyprotein3.7e-6529.17Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA
        V Y S ++   + NY   D E++ ++ +LK WRHYL S  E  +I T H++L    T +    N R  RW   ++D++ EI Y P  AN + DALS+   
Subjt:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA

Query:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA
            ++ +  P+ +D        S +   + + Q+S+    + +++    ND  L+      +    E+  +     +  +  + +  D+ +   ++ + 
Subjt:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA

Query:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI
        H     ++PG   +   +   + W+ ++K++ +++  C  CQ  K+   +P G LQP+      WES+SMDFI  LP +  GY  ++VVVDR +K A  +
Subjt:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI

Query:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY
        P   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H  L++ +Y
Subjt:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY

Query:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG
        NN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++  ++ EF+ GD+V +K     G L   K  
Subjt:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY
         L+P F GPF +L++ GP  Y L LP S+       FHVS L +Y
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY

P0CT36 Transposon Tf2-3 polyprotein3.7e-6529.17Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA
        V Y S ++   + NY   D E++ ++ +LK WRHYL S  E  +I T H++L    T +    N R  RW   ++D++ EI Y P  AN + DALS+   
Subjt:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA

Query:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA
            ++ +  P+ +D        S +   + + Q+S+    + +++    ND  L+      +    E+  +     +  +  + +  D+ +   ++ + 
Subjt:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA

Query:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI
        H     ++PG   +   +   + W+ ++K++ +++  C  CQ  K+   +P G LQP+      WES+SMDFI  LP +  GY  ++VVVDR +K A  +
Subjt:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI

Query:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY
        P   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H  L++ +Y
Subjt:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY

Query:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG
        NN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++  ++ EF+ GD+V +K     G L   K  
Subjt:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY
         L+P F GPF +L++ GP  Y L LP S+       FHVS L +Y
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY

P0CT41 Transposon Tf2-12 polyprotein3.7e-6529.17Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA
        V Y S ++   + NY   D E++ ++ +LK WRHYL S  E  +I T H++L    T +    N R  RW   ++D++ EI Y P  AN + DALS+   
Subjt:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA

Query:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA
            ++ +  P+ +D        S +   + + Q+S+    + +++    ND  L+      +    E+  +     +  +  + +  D+ +   ++ + 
Subjt:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA

Query:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI
        H     ++PG   +   +   + W+ ++K++ +++  C  CQ  K+   +P G LQP+      WES+SMDFI  LP +  GY  ++VVVDR +K A  +
Subjt:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI

Query:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY
        P   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H  L++ +Y
Subjt:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY

Query:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG
        NN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++  ++ EF+ GD+V +K     G L   K  
Subjt:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY
         L+P F GPF +L++ GP  Y L LP S+       FHVS L +Y
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY

Q9UR07 Transposon Tf2-11 polyprotein3.7e-6529.17Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA
        V Y S ++   + NY   D E++ ++ +LK WRHYL S  E  +I T H++L    T +    N R  RW   ++D++ EI Y P  AN + DALS+   
Subjt:  VAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYS--EKIQIFTHHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVA

Query:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA
            ++ +  P+ +D        S +   + + Q+S+    + +++    ND  L+      +    E+  +     +  +  + +  D+ +   ++ + 
Subjt:  HSAALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEA

Query:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI
        H     ++PG   +   +   + W+ ++K++ +++  C  CQ  K+   +P G LQP+      WES+SMDFI  LP +  GY  ++VVVDR +K A  +
Subjt:  HSSPFTMYPGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFI

Query:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY
        P   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H  L++ +Y
Subjt:  PGKSTYTASKWGQLYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAY

Query:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG
        NN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++  ++ EF+ GD+V +K     G L   K  
Subjt:  NNSYQATIDMAPFEALYG-KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDL-EFEVGDMVFLKVAPMKGVLRFEKKG

Query:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY
         L+P F GPF +L++ GP  Y L LP S+       FHVS L +Y
Subjt:  MLSPHFVGPFEILERIGPIAYRLALPPSL-FAVHDVFHVSMLRRY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGTAGGAGTGGTTTTTGCACTA
AAGATATGGAGGCACTACCTGTACAGTGAGAAGATACAGATTTTCACTCACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGCTGAACATGAGGCAAAGG
AGGTGGCTTGAGTTAGTGAAAGACTACGACTGCGAGATTCTGTATCACCCAAGTAAGGCAAATGTAGTACCTGACGCGCTGAGCAAGAAGGTTGCTCATTCAGCA
GCGCTTATCAGCAAGCAAGCTCCCTTACTCAGAGACTTTAAGAGAGTCGAGATTGCAGTCTCAGTAGAAGAGGTCACCTCACAGTTGGCTCAGTTGTCAGTACAG
CCGACCATGAGACAGAGGATTATTGTTGCTCAACTAAATGATCCTTATTTGGTCAAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGCGAGGATTTCTCCATATCC
TCTGACGATGGCCTTACATTTGAGGGACACTTGTGTGTATTGAAAGACAGTGCAGTCAAGACAGAGCTTTTGATGGAGGCTCACAGTTCTCCATTTACTATGTAC
CCTGGAAGTACGAAGATGTACCAGGATTTGAGGTGTGTCTATTGGTGGAGGAACATGAAGAAAGAAGTGGCAGATTTTATCAGTAGATGTTTGGTATGCCAGCAG
GTGAAGGCACCTAGACAACGGCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCTAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTAGAGGACTGCCCAGG
ACTCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCAGCCCATTTTATTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAG
CTATATATCACGGAGATAGTGAAACTGCATGGAGTACCTGTATCCATCATTTCGGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAGCTTGCA
TTGGGCACGAGGTTAGACTTCAGCACAACTTTTCATCCTCAGACCGATGGTCAAACAGAGAGGTTGAACCAAATTTTGGAGGACATGCTGCGAGTCTGGGTGCTA
GAGTTTTCAGGGAGTTGGGACTCCCATTTTCATTTGATGGAGTTCGCCTATAATAACAGCTACCAGGCTACTATCGACATGGCACCATTTGAGGCTCTGTATGGT
AAGTGTTGTAGATCTCCCATATGCTGGGTGGAGGTTGGTGAGCAGAGGATGCTAGGCCATGAGTTAGTTCAGACCACCAACGCAGCCATACAGAAAATCCGAGCT
CGTATGTTGACGGCACAAAGCAGACATAAGAGTTATGTTGATGTGCGGCGTATGGATCTCGAGTTCGAGGTGGGAGACATGGTCTTTCTGAAGGTAGCACCTATG
AAGGGTGTTCTGAGGTTTGAGAAGAAGGGGATGCTAAGTCCACATTTTGTAGGGCCGTTTGAGATACTGGAGCGGATTGGCCCTATAGCTTATCGCTTGGCGTTG
CCCCCATCTCTTTTTGCAGTGCACGATGTATTCCATGTCTCCATGCTGAGGAGGTATGTCGCAGACCCCGACGCATGTAGTGGACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGTAGGAGTGGTTTTTGCACTA
AAGATATGGAGGCACTACCTGTACAGTGAGAAGATACAGATTTTCACTCACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGCTGAACATGAGGCAAAGG
AGGTGGCTTGAGTTAGTGAAAGACTACGACTGCGAGATTCTGTATCACCCAAGTAAGGCAAATGTAGTACCTGACGCGCTGAGCAAGAAGGTTGCTCATTCAGCA
GCGCTTATCAGCAAGCAAGCTCCCTTACTCAGAGACTTTAAGAGAGTCGAGATTGCAGTCTCAGTAGAAGAGGTCACCTCACAGTTGGCTCAGTTGTCAGTACAG
CCGACCATGAGACAGAGGATTATTGTTGCTCAACTAAATGATCCTTATTTGGTCAAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGCGAGGATTTCTCCATATCC
TCTGACGATGGCCTTACATTTGAGGGACACTTGTGTGTATTGAAAGACAGTGCAGTCAAGACAGAGCTTTTGATGGAGGCTCACAGTTCTCCATTTACTATGTAC
CCTGGAAGTACGAAGATGTACCAGGATTTGAGGTGTGTCTATTGGTGGAGGAACATGAAGAAAGAAGTGGCAGATTTTATCAGTAGATGTTTGGTATGCCAGCAG
GTGAAGGCACCTAGACAACGGCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCTAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTAGAGGACTGCCCAGG
ACTCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCAGCCCATTTTATTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAG
CTATATATCACGGAGATAGTGAAACTGCATGGAGTACCTGTATCCATCATTTCGGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAGCTTGCA
TTGGGCACGAGGTTAGACTTCAGCACAACTTTTCATCCTCAGACCGATGGTCAAACAGAGAGGTTGAACCAAATTTTGGAGGACATGCTGCGAGTCTGGGTGCTA
GAGTTTTCAGGGAGTTGGGACTCCCATTTTCATTTGATGGAGTTCGCCTATAATAACAGCTACCAGGCTACTATCGACATGGCACCATTTGAGGCTCTGTATGGT
AAGTGTTGTAGATCTCCCATATGCTGGGTGGAGGTTGGTGAGCAGAGGATGCTAGGCCATGAGTTAGTTCAGACCACCAACGCAGCCATACAGAAAATCCGAGCT
CGTATGTTGACGGCACAAAGCAGACATAAGAGTTATGTTGATGTGCGGCGTATGGATCTCGAGTTCGAGGTGGGAGACATGGTCTTTCTGAAGGTAGCACCTATG
AAGGGTGTTCTGAGGTTTGAGAAGAAGGGGATGCTAAGTCCACATTTTGTAGGGCCGTTTGAGATACTGGAGCGGATTGGCCCTATAGCTTATCGCTTGGCGTTG
CCCCCATCTCTTTTTGCAGTGCACGATGTATTCCATGTCTCCATGCTGAGGAGGTATGTCGCAGACCCCGACGCATGTAGTGGACTTTGA
Protein sequenceShow/hide protein sequence
MQQGKVVAYASRQLKSHEQNYPTHDLELVGVVFALKIWRHYLYSEKIQIFTHHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVPDALSKKVAHSA
ALISKQAPLLRDFKRVEIAVSVEEVTSQLAQLSVQPTMRQRIIVAQLNDPYLVKKRRLVETGQGEDFSISSDDGLTFEGHLCVLKDSAVKTELLMEAHSSPFTMY
PGSTKMYQDLRCVYWWRNMKKEVADFISRCLVCQQVKAPRQRPAGLLQPLSVLGWKWESVSMDFIRGLPRTLKGYTVIWVVVDRLTKSAHFIPGKSTYTASKWGQ
LYITEIVKLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRVWVLEFSGSWDSHFHLMEFAYNNSYQATIDMAPFEALYG
KCCRSPICWVEVGEQRMLGHELVQTTNAAIQKIRARMLTAQSRHKSYVDVRRMDLEFEVGDMVFLKVAPMKGVLRFEKKGMLSPHFVGPFEILERIGPIAYRLAL
PPSLFAVHDVFHVSMLRRYVADPDACSGL