; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0165121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0165121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:16485734..16487500
RNA-Seq ExpressionCmc06g0165121
SyntenyCmc06g0165121
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045479.1 pol protein [Cucumis melo var. makuwa]8.7e-29694.56Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCI+YRELNKVTVKNRY LP IDDLFDQLQGATVFS+IDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA A FM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLER EI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

KAA0048687.1 pol protein [Cucumis melo var. makuwa]2.7e-29795.1Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

KAA0057672.1 pol protein [Cucumis melo var. makuwa]1.1e-29594.74Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSG HQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSR ATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

KAA0062719.1 pol protein [Cucumis melo var. makuwa]1.0e-29694.92Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTR+ DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVL+QQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

TYK01613.1 pol protein [Cucumis melo var. makuwa]1.1e-29594.56Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQ  EFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

TrEMBL top hitse value%identityAlignment
A0A5A7TW75 Pol protein4.2e-29694.56Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCI+YRELNKVTVKNRY LP IDDLFDQLQGATVFS+IDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA A FM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLER EI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

A0A5A7U330 Reverse transcriptase1.3e-29795.1Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

A0A5A7UP94 Pol protein5.5e-29694.74Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSG HQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSR ATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

A0A5A7VAL8 Pol protein5.0e-29794.92Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTR+ DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVL+QQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQAVEFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

A0A5D3BPI1 Reverse transcriptase5.5e-29694.56Show/hide
Query:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS
        +RASKLLSQGTW ILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVS
Subjt:  MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVS

Query:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM
        PWG  VLFVKKKD SMRLCIDYRELNKVTVKNRY LP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIVMSFGLTNA AVFM
Subjt:  PWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFM

Query:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL
        DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFL
Subjt:  DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFL

Query:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT
        GLAGYYRRFVENFSRIATPLTQLTRKGAPF WSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNY T
Subjt:  GLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIF DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP K NVVADALSRKVSHSAALITRQAPLHRDLERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEI

Query:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI
        AVSVGAV+MQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLA+AGQ  EFS+
Subjt:  AVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFSI

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.65.5e-8338.93Show/hide
Query:  YRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDES-----MRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRI
        Y    A  +E++ Q+Q++L++G IR+S SP+ + +  V KK ++      R+ IDYR+LN++TV +R+ +P +D++  +L     F+ IDL  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDES-----MRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRI

Query:  KDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG
            VSKTAF +++GHYE++ M FGL NA A F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  KCEF  ++ +FLG
Subjt:  KDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG

Query:  HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDS-FQNLKQKLVTAPVLTVPDGSRSFVIY
        HV++  G+  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VPD ++ F + 
Subjt:  HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDS-FQNLKQKLVTAPVLTVPDGSRSFVIY

Query:  SDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPD
        +DAS   L  VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I  DH+ L + +  K+ N +  RW   + ++D +I Y   
Subjt:  SDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPD

Query:  KVNVVADALSR
        K N VADALSR
Subjt:  KVNVVADALSR

P0CT34 Transposon Tf2-1 polyprotein2.9e-7633.46Show/hide
Query:  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +     V+FV KK+ ++R+ +DY+ LNK    N Y LP+I+ L
Subjt:  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ A A F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKY
        +KQ LV+ PVL   D S+  ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L  
Subjt:  LKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVSMQ---LAQLTVQLTLRQKIIDAQSN
          T +    N R  RW   ++D++ EI Y P   N +ADALSR       ++    P+ +D E   I   V  +S+      Q+  + T   K+++  +N
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVSMQ---LAQLTVQLTLRQKIIDAQSN

Query:  DPYLVEKRGLAKAG
        +   VE+    K G
Subjt:  DPYLVEKRGLAKAG

P0CT41 Transposon Tf2-12 polyprotein2.9e-7633.46Show/hide
Query:  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +     V+FV KK+ ++R+ +DY+ LNK    N Y LP+I+ L
Subjt:  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDESMRLCIDYRELNKVTVKNRYLLPMIDDL

Query:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ A A F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQN
        L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Subjt:  LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKY
        +KQ LV+ PVL   D S+  ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH++L  
Subjt:  LKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVSMQ---LAQLTVQLTLRQKIIDAQSN
          T +    N R  RW   ++D++ EI Y P   N +ADALSR       ++    P+ +D E   I   V  +S+      Q+  + T   K+++  +N
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVSMQ---LAQLTVQLTLRQKIIDAQSN

Query:  DPYLVEKRGLAKAG
        +   VE+    K G
Subjt:  DPYLVEKRGLAKAG

P20825 Retrovirus-related Pol polyprotein from transposon 2974.2e-8338.37Show/hide
Query:  PISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDES-----MRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSG
        PI    Y +A     E++ Q+QE+L++G IR S SP+ +    V KK ++      R+ IDYR+LN++T+ +RY +P +D++  +L     F+ IDL  G
Subjt:  PISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKKDES-----MRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSG

Query:  YHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLK
        +HQ+ + +  +SKTAF ++ GHYE++ M FGL NA A F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KCEF  K
Subjt:  YHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLK

Query:  QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSK-ACEDSFQNLKQKLVTAPVLTVPDGS
        + +FLGH+V+  G+  +P K++A+ S+  P+   E+R+FLGL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Subjt:  QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFWSK-ACEDSFQNLKQKLVTAPVLTVPDGS

Query:  RSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
        + FV+ +DAS   L  VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I  DH+ L++    KE   +  RW   + +Y  +
Subjt:  RSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCE

Query:  ILYHPDKVNVVADALSR
        I Y   K N VADALSR
Subjt:  ILYHPDKVNVVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus7.6e-7734.41Show/hide
Query:  DYPDVFPEELPGLPPHREIEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKK-----DESMRLCIDYRELNK
        ++P +F   L G+     +E A++ E  T    PI    Y        E++ Q+ ELL  G IR S SP+ + +  V KK     ++  R+ +D++ LN 
Subjt:  DYPDVFPEELPGLPPHREIEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVKKK-----DESMRLCIDYRELNK

Query:  VTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSK
        VT+ + Y +P I+     L  A  F+ +DL SG+HQ+ +K+ D+ KTAF +  G YEF+ + FGL NA A+F  +++ + RE +     V+IDDI+++S+
Subjt:  VTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFIDDILIYSK

Query:  TEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR--
            H K+LR+VL +L    L     K  F   QV FLG++V+  G+  DP K+ A++    P++V E++ FLG+  YYR+F+++++++A PLT LTR  
Subjt:  TEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR--

Query:  ---------KGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQ----QGKVVAYASRQLKSHEQNYLTHDLELAAVVFAL
                    P    +    SF +LK  L ++ +L  P  ++ F + +DAS   +  VL Q    + + +AY SR L   E+NY T + E+ A++++L
Subjt:  ---------KGAPFFWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQ----QGKVVAYASRQLKSHEQNYLTHDLELAAVVFAL

Query:  KIWRHYLYGE-KIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSR
           R YLYG   I+++ DH+ L +    +  N + +RW   +++Y+CE++Y P K NVVADALSR
Subjt:  KIWRHYLYGE-KIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein3.3e-2741.89Show/hide
Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+  W  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFFW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQ
        ++    +F+ LK  + T PVL +PD    FV  +   K   SC + ++
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGGGAGGTTGATGTATCACTGTCATCGGAACCAGTGGTAAGGGACTA
TCCGGATGTTTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCATACAGAA
TGGCCCCAGCAGAGTTGAAAGAACTGAAAGTGCAGTTACAGGAATTGCTCGATAAGGGATTCATTCGATCGAGTGTGTCACCTTGGGGTACGTCAGTTTTATTTGTTAAG
AAGAAGGATGAATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCTCTTGCCCATGATCGACGATCTGTTTGACCAGTTACA
GGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTATCGAAGACAGCATTTCGTTCCAGATACGGCCACTATG
AGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCAGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGAT
GATATCTTGATATATTCCAAGACAGAGGCCGAGCATGAGAAGCATTTACGTATGGTTCTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTT
TTGGCTAAAGCAGGTGTCCTTTCTAGGACATGTGGTGTCTAAGGCTGGAGTTTCTGTGGACCCAGCTAAGATAGAGGCCGTCACCAGTTGGACCCGACCTTCCACAGTCA
GTGAGGTTCGTAGCTTTTTGGGTTTAGCAGGTTATTATCGGCGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAAGGAGCTCCTTTT
TTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCTAGGAGTTTTGTGATTTATAGTGA
TGCTTCCAAGAAGGGTTTGAGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCTTACACATGATTTAG
AGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCATGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAG
GAACTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGTAAATGTGGTAGCTGATGCTCTTAGTAGAAA
GGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCTCTATGCAGTTAGCCCAGT
TGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAAAGGCAGGGCAAGCTGTTGAGTTCTCC
ATATGTCACACCCCCTCCCGGACTACCTACTACCTTAGACCGAAAGATGGCGTGAAGCCAACAAACAACGCTTTTCTGTACCTGTATCTGTCGACTCTACTTAAAACTTT
CATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGGGAGGTTGATGTATCACTGTCATCGGAACCAGTGGTAAGGGACTA
TCCGGATGTTTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCATACAGAA
TGGCCCCAGCAGAGTTGAAAGAACTGAAAGTGCAGTTACAGGAATTGCTCGATAAGGGATTCATTCGATCGAGTGTGTCACCTTGGGGTACGTCAGTTTTATTTGTTAAG
AAGAAGGATGAATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCTCTTGCCCATGATCGACGATCTGTTTGACCAGTTACA
GGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTATCGAAGACAGCATTTCGTTCCAGATACGGCCACTATG
AGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCAGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGAT
GATATCTTGATATATTCCAAGACAGAGGCCGAGCATGAGAAGCATTTACGTATGGTTCTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTT
TTGGCTAAAGCAGGTGTCCTTTCTAGGACATGTGGTGTCTAAGGCTGGAGTTTCTGTGGACCCAGCTAAGATAGAGGCCGTCACCAGTTGGACCCGACCTTCCACAGTCA
GTGAGGTTCGTAGCTTTTTGGGTTTAGCAGGTTATTATCGGCGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAAGGAGCTCCTTTT
TTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCTAGGAGTTTTGTGATTTATAGTGA
TGCTTCCAAGAAGGGTTTGAGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCTTACACATGATTTAG
AGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCATGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAG
GAACTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGTAAATGTGGTAGCTGATGCTCTTAGTAGAAA
GGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCTCTATGCAGTTAGCCCAGT
TGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAAAGGCAGGGCAAGCTGTTGAGTTCTCC
ATATGTCACACCCCCTCCCGGACTACCTACTACCTTAGACCGAAAGATGGCGTGAAGCCAACAAACAACGCTTTTCTGTACCTGTATCTGTCGACTCTACTTAAAACTTT
CATGTGA
Protein sequenceShow/hide protein sequence
MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGTSVLFVK
KKDESMRLCIDYRELNKVTVKNRYLLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVSKTAFRSRYGHYEFIVMSFGLTNAQAVFMDLMNRVFREFLDTFVIVFID
DILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF
FWSKACEDSFQNLKQKLVTAPVLTVPDGSRSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYFFTQK
ELNMRQRRWLELVKDYDCEILYHPDKVNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVSMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAKAGQAVEFS
ICHTPSRTTYYLRPKDGVKPTNNAFLYLYLSTLLKTFM