; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0165131 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0165131
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPol protein
Genome locationCMiso1.1chr06:16490215..16490847
RNA-Seq ExpressionCmc06g0165131
SyntenyCmc06g0165131
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO45752.1 pol protein [Cucumis melo subsp. melo]6.2e-11194.26Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPM+GVLRFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

KAA0040689.1 pol protein [Cucumis melo var. makuwa]9.6e-11295.22Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYGKCCRSPVCWGEVGEQRLMGPELV+STNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGVLRFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

KAA0060848.1 pol protein [Cucumis melo var. makuwa]3.6e-11195.22Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGVLRFEKRGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

KAA0062245.1 pol protein [Cucumis melo var. makuwa]3.6e-11194.26Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYGKCC+SPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGVLRFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        P+AYRLALP
Subjt:  PVAYRLALP

KAA0066456.1 pol protein [Cucumis melo var. makuwa]6.2e-11194.26Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGV+RFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

TrEMBL top hitse value%identityAlignment
A0A5A7THE6 Reverse transcriptase4.6e-11295.22Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYGKCCRSPVCWGEVGEQRLMGPELV+STNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGVLRFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

A0A5A7UZZ4 Pol protein1.8e-11195.22Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGVLRFEKRGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

A0A5A7V8L8 Pol protein1.8e-11194.26Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYGKCC+SPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGVLRFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        P+AYRLALP
Subjt:  PVAYRLALP

A0A5A7VJE2 Reverse transcriptase3.0e-11194.26Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPMRGV+RFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

Q84KB0 Pol protein3.0e-11194.26Show/hide
Query:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA
        M EIVRLHGVPVSIVSDRDARFTSKFW+GLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS++ATIGMAPFEA
Subjt:  MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEA

Query:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG
        LYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMH AQSRQKSYAD+RRKDLEF+VGDKVFLKVAPM+GVLRFE+RGKLSPRFVGP EILERIG
Subjt:  LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIG

Query:  PVAYRLALP
        PVAYRLALP
Subjt:  PVAYRLALP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein4.6e-2432.21Show/hide
Query:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG
        ++   G P  I++D D  FTS+ W+         + FS  + PQT+GQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG

Query:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP
             SP+   E+        E  Q T +  Q ++  ++    + K Y D++ +++ EF  GD V +K     G L   K  KL+P F GP  +L++ GP
Subjt:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP

Query:  VAYRLALP
          Y L LP
Subjt:  VAYRLALP

P0CT35 Transposon Tf2-2 polyprotein4.6e-2432.21Show/hide
Query:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG
        ++   G P  I++D D  FTS+ W+         + FS  + PQT+GQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG

Query:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP
             SP+   E+        E  Q T +  Q ++  ++    + K Y D++ +++ EF  GD V +K     G L   K  KL+P F GP  +L++ GP
Subjt:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP

Query:  VAYRLALP
          Y L LP
Subjt:  VAYRLALP

P0CT36 Transposon Tf2-3 polyprotein4.6e-2432.21Show/hide
Query:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG
        ++   G P  I++D D  FTS+ W+         + FS  + PQT+GQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG

Query:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP
             SP+   E+        E  Q T +  Q ++  ++    + K Y D++ +++ EF  GD V +K     G L   K  KL+P F GP  +L++ GP
Subjt:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP

Query:  VAYRLALP
          Y L LP
Subjt:  VAYRLALP

P0CT41 Transposon Tf2-12 polyprotein4.6e-2432.21Show/hide
Query:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG
        ++   G P  I++D D  FTS+ W+         + FS  + PQT+GQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG

Query:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP
             SP+   E+        E  Q T +  Q ++  ++    + K Y D++ +++ EF  GD V +K     G L   K  KL+P F GP  +L++ GP
Subjt:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP

Query:  VAYRLALP
          Y L LP
Subjt:  VAYRLALP

Q9UR07 Transposon Tf2-11 polyprotein4.6e-2432.21Show/hide
Query:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG
        ++   G P  I++D D  FTS+ W+         + FS  + PQT+GQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYG

Query:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP
             SP+   E+        E  Q T +  Q ++  ++    + K Y D++ +++ EF  GD V +K     G L   K  KL+P F GP  +L++ GP
Subjt:  -KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDL-EFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGP

Query:  VAYRLALP
          Y L LP
Subjt:  VAYRLALP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAGGGGTTTGCAGACTGCTATGGGCACGAG
GTTAGACTTTAGTACAGCTTTCCATCCACAGACTAACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAAGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCT
GGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTTTAAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAGTGTTGTAGATCCCCTGTT
TGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAAATTAGATCACGTATGCATGCCGCACAGAGTAGGCA
GAAGAGTTATGCGGATTTGAGACGGAAGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAGAAGAGAGGAA
AGCTGAGTCCCCGCTTTGTTGGGCCGATTGAGATCCTGGAGCGGATTGGCCCTGTAGCGTATCGTTTGGCGTTGCCACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAGGGGTTTGCAGACTGCTATGGGCACGAG
GTTAGACTTTAGTACAGCTTTCCATCCACAGACTAACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAAGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCT
GGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTTTAAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAGTGTTGTAGATCCCCTGTT
TGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAAATTAGATCACGTATGCATGCCGCACAGAGTAGGCA
GAAGAGTTATGCGGATTTGAGACGGAAGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAGAAGAGAGGAA
AGCTGAGTCCCCGCTTTGTTGGGCCGATTGAGATCCTGGAGCGGATTGGCCCTGTAGCGTATCGTTTGGCGTTGCCACTGTAA
Protein sequenceShow/hide protein sequence
MFEIVRLHGVPVSIVSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTNGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFKATIGMAPFEALYGKCCRSPV
CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHAAQSRQKSYADLRRKDLEFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPIEILERIGPVAYRLALPL