; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0165301 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0165301
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Tf2-9 polyprotein
Genome locationCMiso1.1chr06:16864738..16865481
RNA-Seq ExpressionCmc06g0165301
SyntenyCmc06g0165301
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047643.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]3.4e-11697.2Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPP LLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQV+ELVLLK
Subjt:  RQVEFQVDELVLLK

KAA0060678.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]8.0e-11899.07Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSE PKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQVDELVLLK
Subjt:  RQVEFQVDELVLLK

TYK02195.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.3e-11798.13Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWI+WLPWAEYWYNTTYQKALG+SPFQVVYG KPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQVDELVLLK
Subjt:  RQVEFQVDELVLLK

TYK08301.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]3.4e-11697.2Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPP LLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQV+ELVLLK
Subjt:  RQVEFQVDELVLLK

TYK23779.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.0e-11697.2Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWI+WLPWAEYWYNTTYQKALG+SPFQVVYG KPPALLSYGERRTSNSSIDEQLKER+VALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQVD+LVLLK
Subjt:  RQVEFQVDELVLLK

TrEMBL top hitse value%identityAlignment
A0A5A7TVR3 Putative retroelement pol polyprotein1.6e-11697.2Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPP LLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQV+ELVLLK
Subjt:  RQVEFQVDELVLLK

A0A5A7UZJ7 Putative retroelement pol polyprotein3.9e-11899.07Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSE PKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQVDELVLLK
Subjt:  RQVEFQVDELVLLK

A0A5D3BSP2 Ty3/gypsy retrotransposon protein1.1e-11798.13Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWI+WLPWAEYWYNTTYQKALG+SPFQVVYG KPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQVDELVLLK
Subjt:  RQVEFQVDELVLLK

A0A5D3C8Y2 Putative retroelement pol polyprotein1.6e-11697.2Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPP LLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQV+ELVLLK
Subjt:  RQVEFQVDELVLLK

A0A5D3DKH5 Ty3/gypsy retrotransposon protein9.6e-11797.2Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFIDGLPKAKGW VILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        NRGLETYLRCFCSERPKEWI+WLPWAEYWYNTTYQKALG+SPFQVVYG KPPALLSYGERRTSNSSIDEQLKER+VALDALREHLLLAQQQMKLYADRKR
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQVEFQVDELVLLK
        RQVEFQVD+LVLLK
Subjt:  RQVEFQVDELVLLK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.9e-2932.03Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFI  LP++ G+  + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        N+ +E  LRC CS  P  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K 
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK
        +++ EFQ  +LV++K   T               P Y  +  G  NY  D+ D  K
Subjt:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK

P0CT35 Transposon Tf2-2 polyprotein1.9e-2932.03Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFI  LP++ G+  + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        N+ +E  LRC CS  P  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K 
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK
        +++ EFQ  +LV++K   T               P Y  +  G  NY  D+ D  K
Subjt:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK

P0CT36 Transposon Tf2-3 polyprotein1.9e-2932.03Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFI  LP++ G+  + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        N+ +E  LRC CS  P  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K 
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK
        +++ EFQ  +LV++K   T               P Y  +  G  NY  D+ D  K
Subjt:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK

P0CT41 Transposon Tf2-12 polyprotein1.9e-2932.03Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFI  LP++ G+  + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        N+ +E  LRC CS  P  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K 
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK
        +++ EFQ  +LV++K   T               P Y  +  G  NY  D+ D  K
Subjt:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK

Q9UR07 Transposon Tf2-11 polyprotein1.9e-2932.03Show/hide
Query:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV
        MDFI  LP++ G+  + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQTDGQTE  
Subjt:  MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVV

Query:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR
        N+ +E  LRC CS  P  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K 
Subjt:  NRGLETYLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKR

Query:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK
        +++ EFQ  +LV++K   T               P Y  +  G  NY  D+ D  K
Subjt:  RQV-EFQVDELVLLKYDHT-------------VKPLY--EAKGMKNYHHDILDPTK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCATTGATGGTCTACCTAAAGCAAAAGGATGGGCTGTAATACTTGTGGTAGTAGATCGGCTCAGCAAATACAGCCACTTCTTGGCCCTTAAACACCCTTACAC
AGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTACGACTGCACGGCTTCCCTACCTCCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCACTTCTGGAATG
AATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCCACAGACCGACGGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGC
TTTTGTAGTGAACGCCCAAAGGAATGGATCATGTGGCTACCTTGGGCCGAGTACTGGTACAACACTACTTATCAAAAGGCGCTGGGACAATCACCCTTCCAAGTGGTCTA
TGGCCGTAAACCGCCAGCCCTACTGTCTTATGGAGAACGAAGAACTTCAAATTCTTCAATAGACGAGCAGTTGAAAGAACGAGATGTGGCCTTAGACGCACTACGGGAGC
ACTTATTGCTAGCTCAACAACAAATGAAACTATATGCTGACCGAAAAAGAAGACAAGTGGAATTCCAGGTTGATGAATTAGTATTACTTAAATACGACCATACCGTCAAG
CCACTCTACGAAGCAAAAGGAATGAAAAACTATCATCACGATATTTTAGACCCTACAAAATTCTCGAAAGAATTGGTGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCATTGATGGTCTACCTAAAGCAAAAGGATGGGCTGTAATACTTGTGGTAGTAGATCGGCTCAGCAAATACAGCCACTTCTTGGCCCTTAAACACCCTTACAC
AGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTACGACTGCACGGCTTCCCTACCTCCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCACTTCTGGAATG
AATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCCACAGACCGACGGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGC
TTTTGTAGTGAACGCCCAAAGGAATGGATCATGTGGCTACCTTGGGCCGAGTACTGGTACAACACTACTTATCAAAAGGCGCTGGGACAATCACCCTTCCAAGTGGTCTA
TGGCCGTAAACCGCCAGCCCTACTGTCTTATGGAGAACGAAGAACTTCAAATTCTTCAATAGACGAGCAGTTGAAAGAACGAGATGTGGCCTTAGACGCACTACGGGAGC
ACTTATTGCTAGCTCAACAACAAATGAAACTATATGCTGACCGAAAAAGAAGACAAGTGGAATTCCAGGTTGATGAATTAGTATTACTTAAATACGACCATACCGTCAAG
CCACTCTACGAAGCAAAAGGAATGAAAAACTATCATCACGATATTTTAGACCCTACAAAATTCTCGAAAGAATTGGTGAGGTAG
Protein sequenceShow/hide protein sequence
MDFIDGLPKAKGWAVILVVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRC
FCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKYDHTVK
PLYEAKGMKNYHHDILDPTKFSKELVR