CuGenDBv2

Gene ID	Cmc06g0165361
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr06:17027634..17030108
RNA-Seq Expression	Cmc06g0165361
Synteny	Cmc06g0165361
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025917.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.16

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT                         QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLRR V
Subjt:  SMLRRSV

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

A0A5A7TP01 Reverse transcriptase

0.0e+00

96.16

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT                         QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLRR V
Subjt:  SMLRRSV

A0A5A7V2A0 Reverse transcriptase

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

A0A5D3BTN0 Reverse transcriptase

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

A0A5D3C6W3 Reverse transcriptase

0.0e+00

93.8

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        IVFIDDILIYSKTEAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW
        IASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLT                         QGKVVAYASRQLK HE+NYPTHDLELAAVVFALKIW
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLT-------------------------QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT
        RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRD ERAEIAVSVGEV AQLAQLT
Subjt:  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLT

Query:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS
        VQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSIS+DDGLM EGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVS
Subjt:  VQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVS

Query:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
        FTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML
Subjt:  FTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRML

Query:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV
        GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+
Subjt:  GPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHV

Query:  SMLRRSV
        SMLR+ V
Subjt:  SMLRRSV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.2e-124

32.52

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL                    G V            V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
            + Q+++    + +++    ND  L      E +RV E       +I   DGL++  +  + +P D+ +   ++ + H     +HPG   +   +  
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV
         + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++
Subjt:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K
           G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++   
Subjt:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K

Query:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA
           SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  
Subjt:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA

Query:  YRLALPPSLSAV-HDVFHVSMLRR
        Y L LP S+  +    FHVS L +
Subjt:  YRLALPPSLSAV-HDVFHVSMLRR

P0CT35 Transposon Tf2-2 polyprotein

2.2e-124

32.52

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL                    G V            V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
            + Q+++    + +++    ND  L      E +RV E       +I   DGL++  +  + +P D+ +   ++ + H     +HPG   +   +  
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV
         + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++
Subjt:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K
           G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++   
Subjt:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K

Query:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA
           SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  
Subjt:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA

Query:  YRLALPPSLSAV-HDVFHVSMLRR
        Y L LP S+  +    FHVS L +
Subjt:  YRLALPPSLSAV-HDVFHVSMLRR

P0CT36 Transposon Tf2-3 polyprotein

2.2e-124

32.52

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL                    G V            V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
            + Q+++    + +++    ND  L      E +RV E       +I   DGL++  +  + +P D+ +   ++ + H     +HPG   +   +  
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV
         + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++
Subjt:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K
           G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++   
Subjt:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K

Query:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA
           SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  
Subjt:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA

Query:  YRLALPPSLSAV-HDVFHVSMLRR
        Y L LP S+  +    FHVS L +
Subjt:  YRLALPPSLSAV-HDVFHVSMLRR

P0CT37 Transposon Tf2-4 polyprotein

2.2e-124

32.52

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL                    G V            V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
            + Q+++    + +++    ND  L      E +RV E       +I   DGL++  +  + +P D+ +   ++ + H     +HPG   +   +  
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV
         + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++
Subjt:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K
           G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++   
Subjt:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K

Query:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA
           SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  
Subjt:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA

Query:  YRLALPPSLSAV-HDVFHVSMLRR
        Y L LP S+  +    FHVS L +
Subjt:  YRLALPPSLSAV-HDVFHVSMLRR

P0CT41 Transposon Tf2-12 polyprotein

2.2e-124

32.52

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
        +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV

Query:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
        + ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR

Query:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF
        +  PL  L +K   + W+P    + + +KQ LV+ PVL                    G V            V Y S ++   + NY   D E+ A++ 
Subjt:  IASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTQ------------------GKV------------VAYASRQLKNHERNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGE

Query:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS
            + Q+++    + +++    ND  L      E +RV E       +I   DGL++  +  + +P D+ +   ++ + H     +HPG   +   +  
Subjt:  VAAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQGEGFSISADDGLMVEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRS

Query:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV
         + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++
Subjt:  VYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K
           G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++   
Subjt:  RLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-K

Query:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA
           SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  
Subjt:  CCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVA

Query:  YRLALPPSLSAV-HDVFHVSMLRR
        Y L LP S+  +    FHVS L +
Subjt:  YRLALPPSLSAV-HDVFHVSMLRR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.2e-25

44.63

Show/hide

Query:  HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    H+ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACESSFQELKQKLVTAPVL
        +     +F+ LK  + T PVL
Subjt:  SPACESSFQELKQKLVTAPVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCCTACCCAGAATCGAGGACCTGTTCGACCAGTTACAGGGGGCCACC
GTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTC
ATAGTGATGTCCTTCGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGAC
GATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGT
GAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTTACCAACTGGCCTCGACCG
TCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGG
AAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACACAAGGTAAGGTAGTTGCG
TATGCCTCACGCCAGTTGAAGAATCATGAGCGGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTAC
GGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGAC
TACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACGAAGCAGACCCCC
TTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTGCCGCACAGTTGGCTCAGTTGACGGTTCAGCCAACCTTGAGGCAAAAGATCATT
GCTGCTCAGCTGAATGATCCTTATCTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCGCTGACGATGGCCTTATGGTTGAG
GGACGCTTGTGTGTACCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACCGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGAAGTACGAAGATGTACCAG
GACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCGGAGTTCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCA
GCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGACTTTATCACGGGACTGCCCAAGACCTTGAAGGGCTACACGGTGATC
TGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACACTGCCAGCAAGTGGGGGCAGTTATACATGACGGAAATAGTAAGA
CTGCACGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGCTTCACTTCGAAATTTTGGCAAGGGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGC
ACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCCTGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCC
CACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCCACCATTGGTATGGCTCCGTTTGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGC
TGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACCGCACAGAGCAGA
CAGAAGAGTTACGCTGATGTACGGCGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTTTGAAGGTAGCACCGATGAAGGGCGTTCTGAGGTTCGAGAAG
AAGGGGAAGTTGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGATTGGCCCTGTGGCTTATCGTTTGGCCTTGCCCCCATCCCTCTCAGCAGTGCAT
GACGTATTCCATGTCTCCATGTTGAGGAGGTCAGTGAGAACTTGA

mRNA sequence

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Protein sequence

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MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFID
DILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR
KGTPFVWSPACESSFQELKQKLVTAPVLTQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
YDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISADDGLMVE
GRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVI
WVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDS
HLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEK
KGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSVRT

Cmc06g0165361 (gene) of Melon (Charmono) v1.1 genome