; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0165461 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0165461
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr06:17322043..17322981
RNA-Seq ExpressionCmc06g0165461
SyntenyCmc06g0165461
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035613.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.4e-9790.91Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
        MKAYRLYDIERKTIF+SRDVTFL+QHF FHSISTNDHSELENAFHDLVLP+PILDTHITTQTIA+PIIENPNTDSSPEIQAEQDATNA+  PN ANTEHT
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT

Query:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTN
        TVP +LPMP KSTRQHKP NFLKDYHCHLL HGSP KDTTSYHPLNKSLSYEKLN THRTFLCNVSTEYEPSFFHQAVKSQSWRN MDAEIA MERTN
Subjt:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTN

KAA0038341.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.1e-6647.37Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTD--SSPEIQAEQDATNADSTPNTANTE
        +K Y+LYDI R+  FISRDV F ++ FPFHSI   D     N     V+  P+ D       +   +I NP TD  S  E   E      D  P T+N++
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTD--SSPEIQAEQDATNADSTPNTANTE

Query:  HTTVPYSLP---MPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIME
         T      P   M  KS+  H PP++LKD+  +L +  S      +  PLN+  SY   +  HR +L NV++ YEP+++HQAVK Q+WR  M  EI   +
Subjt:  HTTVPYSLP---MPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIME

Query:  RTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYM
        R N W+IV LP  HH +G KWVYKVK   DGT+D++KARLV KGY QQE IDF DTFSPVAKI TVK+ L+LTA++ WS+ QMD+NNAFLN DLFEEV++
Subjt:  RTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYM

Query:  TFPM
        T P+
Subjt:  TFPM

KAA0057703.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.9e-12685.88Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
        MKAYRLYDIERKTIF+SRDVTFL+QHF  HSISTNDHSELENAFH+LVLP+PIL+THITTQTI + IIENPNTDSSPEIQ EQDATN D  PNT NTEHT
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT

Query:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW
        TVP +L MP KSTRQHKPPN LKDYHCHLL HGSP KDTTSYHPLNKSLSYEKLN THRTFLCNVSTEYE SFFHQAVKSQSWRN MD EIA MERTN  
Subjt:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW

Query:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVK
        SIVPLP+GHH +GCKWVYKVKYHADGT+DKHKA LV KGY QQE IDFLDTFSPVAKIVTVK
Subjt:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVK

KAA0063422.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.1e-17597.44Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
        MKAYRLYDIERKTIFISRDVTFL+QHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQT ADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT

Query:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW
        TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLN THRTFLCNVSTEYEP FFHQAVKSQSWRN MDAEIAIMERTN W
Subjt:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW

Query:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMD
        SIVPLPHGHHALGCKWVYKVKYHADGTVDK+KARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMT PMD
Subjt:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMD

Query:  YYSKEQQASSTS
        YYSKEQQASSTS
Subjt:  YYSKEQQASSTS

XP_008463248.1 PREDICTED: uncharacterized protein LOC103501452 [Cucumis melo]1.7e-10981.05Show/hide
Query:  IENPNTDSSPEIQAE---QDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCN
        +E P  +S  E + +    DATN D  PNT NTEHTTVP +L MP KSTRQHKPPN LKDYHCHLL HGSP KDTTSYHPLNKSLSYEKLN THRTFLCN
Subjt:  IENPNTDSSPEIQAE---QDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCN

Query:  VSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVL
        VSTEYE SFFHQAVKSQSWRN MD EIA MERTN  SIVPLP+GHH +GCKWVYKVKYHADGT+DKHKA LV KGY QQE IDFLDTFSPVAKIVTVKVL
Subjt:  VSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVL

Query:  LSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQQASSTS
        LSLT SFGWSLCQMDVNN FLN DLFEEVYMT PM YYSKEQQASST+
Subjt:  LSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQQASSTS

TrEMBL top hitse value%identityAlignment
A0A1S3CJ63 uncharacterized protein LOC1035014528.4e-11081.05Show/hide
Query:  IENPNTDSSPEIQAE---QDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCN
        +E P  +S  E + +    DATN D  PNT NTEHTTVP +L MP KSTRQHKPPN LKDYHCHLL HGSP KDTTSYHPLNKSLSYEKLN THRTFLCN
Subjt:  IENPNTDSSPEIQAE---QDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCN

Query:  VSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVL
        VSTEYE SFFHQAVKSQSWRN MD EIA MERTN  SIVPLP+GHH +GCKWVYKVKYHADGT+DKHKA LV KGY QQE IDFLDTFSPVAKIVTVKVL
Subjt:  VSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVL

Query:  LSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQQASSTS
        LSLT SFGWSLCQMDVNN FLN DLFEEVYMT PM YYSKEQQASST+
Subjt:  LSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQQASSTS

A0A5A7V587 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-17597.44Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
        MKAYRLYDIERKTIFISRDVTFL+QHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQT ADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT

Query:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW
        TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLN THRTFLCNVSTEYEP FFHQAVKSQSWRN MDAEIAIMERTN W
Subjt:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW

Query:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMD
        SIVPLPHGHHALGCKWVYKVKYHADGTVDK+KARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMT PMD
Subjt:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMD

Query:  YYSKEQQASSTS
        YYSKEQQASSTS
Subjt:  YYSKEQQASSTS

A0A5D3BDH6 Retrovirus-related Pol polyprotein from transposon TNT 1-945.2e-6747.37Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTD--SSPEIQAEQDATNADSTPNTANTE
        +K Y+LYDI R+  FISRDV F ++ FPFHSI   D     N     V+  P+ D       +   +I NP TD  S  E   E      D  P T+N++
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTD--SSPEIQAEQDATNADSTPNTANTE

Query:  HTTVPYSLP---MPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIME
         T      P   M  KS+  H PP++LKD+  +L +  S      +  PLN+  SY   +  HR +L NV++ YEP+++HQAVK Q+WR  M  EI   +
Subjt:  HTTVPYSLP---MPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIME

Query:  RTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYM
        R N W+IV LP  HH +G KWVYKVK   DGT+D++KARLV KGY QQE IDF DTFSPVAKI TVK+ L+LTA++ WS+ QMD+NNAFLN DLFEEV++
Subjt:  RTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYM

Query:  TFPM
        T P+
Subjt:  TFPM

A0A5D3DVP4 Putative mitochondrial protein2.9e-12685.88Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
        MKAYRLYDIERKTIF+SRDVTFL+QHF  HSISTNDHSELENAFH+LVLP+PIL+THITTQTI + IIENPNTDSSPEIQ EQDATN D  PNT NTEHT
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT

Query:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW
        TVP +L MP KSTRQHKPPN LKDYHCHLL HGSP KDTTSYHPLNKSLSYEKLN THRTFLCNVSTEYE SFFHQAVKSQSWRN MD EIA MERTN  
Subjt:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIW

Query:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVK
        SIVPLP+GHH +GCKWVYKVKYHADGT+DKHKA LV KGY QQE IDFLDTFSPVAKIVTVK
Subjt:  SIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVK

A0A5D3E4Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-9790.91Show/hide
Query:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT
        MKAYRLYDIERKTIF+SRDVTFL+QHF FHSISTNDHSELENAFHDLVLP+PILDTHITTQTIA+PIIENPNTDSSPEIQAEQDATNA+  PN ANTEHT
Subjt:  MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHT

Query:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTN
        TVP +LPMP KSTRQHKP NFLKDYHCHLL HGSP KDTTSYHPLNKSLSYEKLN THRTFLCNVSTEYEPSFFHQAVKSQSWRN MDAEIA MERTN
Subjt:  TVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTN

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.8e-2033.33Show/hide
Query:  KDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLV
        K   SY+  + SL+   LN+   T   +V   ++   +       SW   ++ E+   +  N W+I   P   + +  +WV+ VKY+  G   ++KARLV
Subjt:  KDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLV

Query:  TKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFP
         +G+ Q+  ID+ +TF+PVA+I + + +LSL   +   + QMDV  AFLN  L EE+YM  P
Subjt:  TKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFP

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.0e-2137.96Show/hide
Query:  VSTEYEPSFFHQAVKSQSWRNVMDA---EIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTV
        +S + EP    + +       +M A   E+  +++   + +V LP G   L CKWV+K+K   D  + ++KARLV KG+ Q++ IDF + FSPV K+ ++
Subjt:  VSTEYEPSFFHQAVKSQSWRNVMDA---EIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTV

Query:  KVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFP
        + +LSL AS    + Q+DV  AFL+ DL EE+YM  P
Subjt:  KVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFP

P92520 Uncharacterized mitochondrial protein AtMg008203.9e-1939.13Show/hide
Query:  KLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTF
        KLN  + +     + + EP     A+K   W   M  E+  + R   W +VP P   + LGCKWV+K K H+DGT+D+ KARLV KG+ Q+E I F++T+
Subjt:  KLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTF

Query:  SPVAKIVTVKVLLSL
        SPV +  T++ +L++
Subjt:  SPVAKIVTVKVLLSL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.5e-2630.13Show/hide
Query:  ENPNTDSSPEIQAEQDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTE
        +N  T+ SP   A+  +T A S+ ++ +   +    S      S   H PP         ++ + +     T            K N  + +   +++ E
Subjt:  ENPNTDSSPEIQAEQDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTE

Query:  YEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHAL-GCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSL
         EP    QA+K + WRN M +EI      + W +VP P  H  + GC+W++  KY++DG+++++KARLV KGY Q+  +D+ +TFSPV K  +++++L +
Subjt:  YEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHAL-GCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSL

Query:  TASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQ
             W + Q+DVNNAFL   L ++VYM+ P  +  K++
Subjt:  TASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQ

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.6e-2628.03Show/hide
Query:  HFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIAD-PIIENPNTDSSPEIQAEQDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKD
        + P  SIS+   SE     H+   P P    H T  + ++ PI+ NPN +S       Q++    S  ++ +    +   S P    S+    PP     
Subjt:  HFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIAD-PIIENPNTDSSPEIQAEQDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKD

Query:  YHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHR------TFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHAL-GCKWV
             +    P+    +  P+N      +     R      ++  +++   EP    QA+K   WR  M +EI      + W +VP P     + GC+W+
Subjt:  YHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHR------TFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHAL-GCKWV

Query:  YKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQ
        +  K+++DG+++++KARLV KGY Q+  +D+ +TFSPV K  +++++L +     W + Q+DVNNAFL   L +EVYM+ P  +  K++
Subjt:  YKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQ

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-4539.56Show/hide
Query:  AEQDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKS
        ++ DA+ + S+ +   + +       P    S R+ + P +L+DY+CH +A       + + H +++ LSYEK++  + +FL  ++   EPS +++A + 
Subjt:  AEQDATNADSTPNTANTEHTTVPYSLPMPCKSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKS

Query:  QSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDV
          W   MD EI  ME T+ W I  LP     +GCKWVYK+KY++DGT++++KARLV KGY QQE IDF++TFSPV K+ +VK++L+++A + ++L Q+D+
Subjt:  QSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDV

Query:  NNAFLNSDLFEEVYMTFPMDYYSKE
        +NAFLN DL EE+YM  P  Y +++
Subjt:  NNAFLNSDLFEEVYMTFPMDYYSKE

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.7e-2039.13Show/hide
Query:  KLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTF
        KLN  + +     + + EP     A+K   W   M  E+  + R   W +VP P   + LGCKWV+K K H+DGT+D+ KARLV KG+ Q+E I F++T+
Subjt:  KLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKVKYHADGTVDKHKARLVTKGYGQQEDIDFLDTF

Query:  SPVAKIVTVKVLLSL
        SPV +  T++ +L++
Subjt:  SPVAKIVTVKVLLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCATACCGCTTATACGATATTGAAAGAAAAACCATCTTTATATCACGAGATGTGACATTCCTTGACCAACACTTCCCCTTTCATTCAATATCCACCAATGACCA
CTCAGAACTTGAAAATGCTTTCCATGATCTTGTCTTACCTATGCCAATACTTGACACCCACATCACCACCCAAACCATTGCTGATCCTATCATTGAAAACCCAAATACTG
ACAGTTCACCTGAAATCCAAGCTGAACAGGATGCTACAAATGCAGACAGCACACCAAATACAGCCAATACAGAACATACCACCGTGCCTTATAGCCTACCCATGCCTTGT
AAATCCACAAGGCAACATAAACCTCCCAACTTCCTAAAAGACTACCACTGCCACCTACTAGCTCATGGTTCCCCTCTAAAAGACACTACCTCATATCACCCTTTAAATAA
ATCCCTATCCTACGAAAAACTGAATTCAACGCACCGTACCTTCTTATGCAATGTGTCTACAGAATATGAACCATCCTTCTTTCACCAAGCAGTAAAGTCACAATCATGGA
GAAATGTTATGGATGCAGAAATAGCTATCATGGAAAGAACAAATATCTGGAGCATTGTTCCCCTTCCCCATGGGCATCATGCTCTTGGATGCAAATGGGTCTATAAAGTT
AAATACCATGCTGATGGCACTGTTGATAAGCATAAAGCCCGACTAGTTACAAAAGGTTATGGTCAACAAGAAGACATTGACTTCCTTGACACCTTTTCCCCTGTGGCTAA
AATTGTCACTGTCAAAGTACTTCTATCGCTAACGGCCTCCTTTGGTTGGTCCCTATGTCAAATGGATGTGAATAATGCATTCCTTAATAGCGACTTATTTGAAGAAGTAT
ACATGACATTTCCAATGGACTATTATTCCAAAGAGCAACAAGCTTCTTCCACCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCATACCGCTTATACGATATTGAAAGAAAAACCATCTTTATATCACGAGATGTGACATTCCTTGACCAACACTTCCCCTTTCATTCAATATCCACCAATGACCA
CTCAGAACTTGAAAATGCTTTCCATGATCTTGTCTTACCTATGCCAATACTTGACACCCACATCACCACCCAAACCATTGCTGATCCTATCATTGAAAACCCAAATACTG
ACAGTTCACCTGAAATCCAAGCTGAACAGGATGCTACAAATGCAGACAGCACACCAAATACAGCCAATACAGAACATACCACCGTGCCTTATAGCCTACCCATGCCTTGT
AAATCCACAAGGCAACATAAACCTCCCAACTTCCTAAAAGACTACCACTGCCACCTACTAGCTCATGGTTCCCCTCTAAAAGACACTACCTCATATCACCCTTTAAATAA
ATCCCTATCCTACGAAAAACTGAATTCAACGCACCGTACCTTCTTATGCAATGTGTCTACAGAATATGAACCATCCTTCTTTCACCAAGCAGTAAAGTCACAATCATGGA
GAAATGTTATGGATGCAGAAATAGCTATCATGGAAAGAACAAATATCTGGAGCATTGTTCCCCTTCCCCATGGGCATCATGCTCTTGGATGCAAATGGGTCTATAAAGTT
AAATACCATGCTGATGGCACTGTTGATAAGCATAAAGCCCGACTAGTTACAAAAGGTTATGGTCAACAAGAAGACATTGACTTCCTTGACACCTTTTCCCCTGTGGCTAA
AATTGTCACTGTCAAAGTACTTCTATCGCTAACGGCCTCCTTTGGTTGGTCCCTATGTCAAATGGATGTGAATAATGCATTCCTTAATAGCGACTTATTTGAAGAAGTAT
ACATGACATTTCCAATGGACTATTATTCCAAAGAGCAACAAGCTTCTTCCACCTCATAG
Protein sequenceShow/hide protein sequence
MKAYRLYDIERKTIFISRDVTFLDQHFPFHSISTNDHSELENAFHDLVLPMPILDTHITTQTIADPIIENPNTDSSPEIQAEQDATNADSTPNTANTEHTTVPYSLPMPC
KSTRQHKPPNFLKDYHCHLLAHGSPLKDTTSYHPLNKSLSYEKLNSTHRTFLCNVSTEYEPSFFHQAVKSQSWRNVMDAEIAIMERTNIWSIVPLPHGHHALGCKWVYKV
KYHADGTVDKHKARLVTKGYGQQEDIDFLDTFSPVAKIVTVKVLLSLTASFGWSLCQMDVNNAFLNSDLFEEVYMTFPMDYYSKEQQASSTS