| GenBank top hits | e value | %identity | Alignment |
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| KAA0046134.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.1e-65 | 82.69 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDY+ELNKVTVKN+YPL RIDDLFDQLQGATVFSKI+L+ GY QL+IKD D+PKTTFR RYGHYEFIVMSFGLTNA AVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKT+ KHEEHLRMVL+TLR NKLY KFSKCEF LKQVSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| KAA0048696.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.8e-65 | 82.69 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDYKELNKVTVKNKYPL RIDDLFDQLQGATVFSKI+LR GY QL+IKDSD+PKT FR RYG+YEFIVMSFGLTN LAVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKT+ +HE+HLRMVL+TLRANKLY KFSKCEF LKQVSF+ HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| KAA0062719.1 pol protein [Cucumis melo var. makuwa] | 3.1e-65 | 82.69 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDY+ELNKVTVKN+YPL RIDDLFDQLQGATVFSKI+LR GY QL+IKD D+PKT FR RYGHYEFIVMSFGLTNALAVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKT+ +HEEHLRMVL+TLR NKLY KFSKCEF LKQVSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| KAA0065337.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-65 | 83.33 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDY+ELNKVTVKNKYP RIDDLFDQLQGATVFSKI+LRLGY QL+IKD D+PKT F RYGHYEFIVMSFGLTNA AVFMDLMNRVF++FL+TFM
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKTK +HEEHLRMVL+TLR NKLY KFSKCEF LKQVSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| KAA0067467.1 pol protein [Cucumis melo var. makuwa] | 1.1e-65 | 83.97 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
M L I+YKELNKVTVKNKYPL RIDDLFDQLQGATVFSKI+LR GY QL+IKDSD+PKTTFR RYGHYEFIV+SFGLTNA AVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKTK +HEEHLRMVLETLRANKLY KFSKCEF LK+VSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TSV6 Ty3-gypsy retrotransposon protein | 1.5e-65 | 82.69 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDY+ELNKVTVKN+YPL RIDDLFDQLQGATVFSKI+L+ GY QL+IKD D+PKTTFR RYGHYEFIVMSFGLTNA AVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKT+ KHEEHLRMVL+TLR NKLY KFSKCEF LKQVSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| A0A5A7U386 Reverse transcriptase | 8.8e-66 | 82.69 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDYKELNKVTVKNKYPL RIDDLFDQLQGATVFSKI+LR GY QL+IKDSD+PKT FR RYG+YEFIVMSFGLTN LAVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKT+ +HE+HLRMVL+TLRANKLY KFSKCEF LKQVSF+ HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| A0A5A7VAL8 Pol protein | 1.5e-65 | 82.69 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDY+ELNKVTVKN+YPL RIDDLFDQLQGATVFSKI+LR GY QL+IKD D+PKT FR RYGHYEFIVMSFGLTNALAVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKT+ +HEEHLRMVL+TLR NKLY KFSKCEF LKQVSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| A0A5A7VE21 Ty3-gypsy retrotransposon protein | 1.1e-65 | 83.33 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
MRL IDY+ELNKVTVKNKYP RIDDLFDQLQGATVFSKI+LRLGY QL+IKD D+PKT F RYGHYEFIVMSFGLTNA AVFMDLMNRVF++FL+TFM
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKTK +HEEHLRMVL+TLR NKLY KFSKCEF LKQVSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| A0A5A7VJV1 Pol protein | 5.1e-66 | 83.97 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
M L I+YKELNKVTVKNKYPL RIDDLFDQLQGATVFSKI+LR GY QL+IKDSD+PKTTFR RYGHYEFIV+SFGLTNA AVFMDLMNRVF++FL+TF+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
IVFIDDIL+YSKTK +HEEHLRMVLETLRANKLY KFSKCEF LK+VSFL HV K
Subjt: IVFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHVFLK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.9e-25 | 36.18 | Show/hide |
Query: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
R+ IDY++LN++TV +++P+ +D++ +L F+ I+L G+ Q+++ + KT F ++GHYE++ M FGL NA A F MN + + LN +
Subjt: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
Query: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHV
V++DDI+V+S + +H + L +V E L L ++ KCEF ++ +FL HV
Subjt: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHV
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.0e-26 | 35.53 | Show/hide |
Query: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
R+ IDY++LN++T+ ++YP+ +D++ +L F+ I+L G+ Q+++ + I KT F + GHYE++ M FGL NA A F MN + + LN +
Subjt: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
Query: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHV
V++DDI+++S + T+H +++V L L ++ KCEF K+ +FL H+
Subjt: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFLCHV
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| P31843 RNA-directed DNA polymerase homolog | 2.7e-32 | 53.08 | Show/hide |
Query: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
+R+ IDY+ L KVT+KNKYP+ R+DDLFD+L AT F+K++LR GY Q++I D PKTT RYG +EF VM FGLTNALA F +LMN V ++L+ F+
Subjt: MRLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFM
Query: IVFIDDILV---YSKTKTKHEEHLRMVLET
+V++DD++V YS + +H +HLR+V E+
Subjt: IVFIDDILV---YSKTKTKHEEHLRMVLET
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.2e-24 | 40.27 | Show/hide |
Query: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
RL +DY+ LNK T+ + +PL RID+L ++ A +F+ ++L GY Q+ ++ D KT F G YE+ VM FGL NA + F M F+D F+
Subjt: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
Query: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFL
V++DDIL++S++ +H +HL VLE L+ L VK KC+F ++ FL
Subjt: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.2e-24 | 40.27 | Show/hide |
Query: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
RL +DY+ LNK T+ + +PL RID+L ++ A +F+ ++L GY Q+ ++ D KT F G YE+ VM FGL NA + F M F+D F+
Subjt: RLGIDYKELNKVTVKNKYPLSRIDDLFDQLQGATVFSKINLRLGYLQLKIKDSDIPKTTFRLRYGHYEFIVMSFGLTNALAVFMDLMNRVFKDFLNTFMI
Query: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFL
V++DDIL++S++ +H +HL VLE L+ L VK KC+F ++ FL
Subjt: VFIDDILVYSKTKTKHEEHLRMVLETLRANKLYVKFSKCEFQLKQVSFL
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