| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036106.1 gag/pol protein [Cucumis melo var. makuwa] | 9.2e-62 | 96 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
MTKRSFTAKGLRAKTPLELVHSDLCGPMN KARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTI TFQSDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLSVPSTPQ+NGVLERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| KAA0038017.1 gag/pol protein [Cucumis melo var. makuwa] | 4.4e-56 | 89.6 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
M KRSFT K L+AKTPLELVHSDLCGPMNVKAR GYEYFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+VENESGKTI TF+SDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLS PSTPQ+NGVLERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| KAA0054875.1 gag/pol protein [Cucumis melo var. makuwa] | 6.8e-57 | 89.6 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
+TKRSFT KGL AKT LELVHSDLCGPMNVKARGGYEYFISFIDDY+RYGHVYLI NKSDSFEKFKEYKA+VENESGKTI TF+SDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEHEIQSQLS PSTPQ+NGV ERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| KAA0067819.1 gag/pol protein [Cucumis melo var. makuwa] | 3.1e-57 | 89.6 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
MTKRSFT KGLRAKTPLELVHSDLC PMNVKARGGYEYFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+VENESGKT+ TF+SD+GGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLS PSTPQ+NGV ERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| TYK27613.1 gag/pol protein [Cucumis melo var. makuwa] | 4.6e-61 | 95.2 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
MTKRSFTAKGLRAKTPLELVH DLCGPMN KARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTI TFQSDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLSVPSTPQ+NGVLERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T1K6 Gag/pol protein | 4.5e-62 | 96 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
MTKRSFTAKGLRAKTPLELVHSDLCGPMN KARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTI TFQSDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLSVPSTPQ+NGVLERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| A0A5A7UMM9 Gag/pol protein | 3.3e-57 | 89.6 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
+TKRSFT KGL AKT LELVHSDLCGPMNVKARGGYEYFISFIDDY+RYGHVYLI NKSDSFEKFKEYKA+VENESGKTI TF+SDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEHEIQSQLS PSTPQ+NGV ERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| A0A5A7VRN6 Gag/pol protein | 1.5e-57 | 89.6 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
MTKRSFT KGLRAKTPLELVHSDLC PMNVKARGGYEYFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+VENESGKT+ TF+SD+GGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLS PSTPQ+NGV ERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| A0A5D3BTT1 Gag/pol protein | 2.1e-56 | 89.6 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
M KRSFT K L+AKTPLELVHSDLCGPMNVKAR GYEYFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+VENESGKTI TF+SDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLS PSTPQ+NGVLERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| A0A5D3DV96 Gag/pol protein | 2.2e-61 | 95.2 | Show/hide |
Query: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
MTKRSFTAKGLRAKTPLELVH DLCGPMN KARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTI TFQSDRGGEY+DLRFQDYL
Subjt: MTKRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYL
Query: IEHEIQSQLSVPSTPQRNGVLERRN
IEH IQSQLSVPSTPQ+NGVLERRN
Subjt: IEHEIQSQLSVPSTPQRNGVLERRN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.0e-14 | 37.27 | Show/hide |
Query: KTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIEHEIQSQLSVPS
K PL +VHSD+CGP+ YF+ F+D ++ Y YLI KSD F F+++ A+ E + D G EY+ + + ++ I L+VP
Subjt: KTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIEHEIQSQLSVPS
Query: TPQRNGVLER
TPQ NGV ER
Subjt: TPQRNGVLER
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-24 | 43.8 | Show/hide |
Query: SFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIEHE
SF R L+LV+SD+CGPM +++ GG +YF++FIDD SR VY++ K F+ F+++ A VE E+G+ + +SD GGEY F++Y H
Subjt: SFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIEHE
Query: IQSQLSVPSTPQRNGVLERRN
I+ + +VP TPQ NGV ER N
Subjt: IQSQLSVPSTPQRNGVLERRN
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 1.4e-07 | 27.42 | Show/hide |
Query: KGLRAK-----TPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDS--FEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLI
KG R K P + +H+D+ GP++ + YFISF D+ +++ VY +H++ + + F A ++N+ ++ Q DRG EY + +L
Subjt: KGLRAK-----TPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDS--FEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLI
Query: EHEIQSQLSVPSTPQRNGVLERRN
++ I + + + +GV ER N
Subjt: EHEIQSQLSVPSTPQRNGVLERRN
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.2e-13 | 34.15 | Show/hide |
Query: KRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIE
K F+ + + PLE ++SD+ + + Y Y++ F+D ++RY +Y + KS E F +K +EN I TF SD GGE+V L +Y +
Subjt: KRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIE
Query: HEIQSQLSVPSTPQRNGVLERRN
H I S P TP+ NG+ ER++
Subjt: HEIQSQLSVPSTPQRNGVLERRN
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.2e-13 | 35.77 | Show/hide |
Query: KRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIE
K F+ + + PLE ++SD+ + + Y Y++ F+D ++RY +Y + KS + F +K+ VEN I T SD GGE+V LR DYL +
Subjt: KRSFTAKGLRAKTPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTINTFQSDRGGEYVDLRFQDYLIE
Query: HEIQSQLSVPSTPQRNGVLERRN
H I S P TP+ NG+ ER++
Subjt: HEIQSQLSVPSTPQRNGVLERRN
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