| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 3.1e-82 | 85.47 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQAGKVQTFKARL+AKGYTQKEG++YEETFSPVA++KSIRILL IATFY+YEIWQMDVKT FLN NLEESIYMVQP+GFI + QEQKVCKLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS V FL+LYVDDILLIGNDV +LTD+KKWL TQFQMKDL A
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| KAA0043610.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-79 | 84.92 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQAGKVQTFKARL+ KGY +KEG+NY+ETFSPV ++KSIRILL I TFYDYEI QMDVKT FLN NLEESIYMVQP+GFIQKGQEQKV KLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDTAIKSYGFE NVDEPCVYKRII STV FLVL VD+ILLIGND+ HLT+IKKWL TQFQMKDLENA
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-84 | 88.27 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQ KVQTF+ARL+AKGYTQKEGI+YEETFSP+A+IKSIRILL IATFYDYEIWQMDVKT FLN NLEESIYMVQP+GFIQKGQEQKVCKLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDT IKSYGFEQNVDEPCVYKRIINSTV FLVLYVDDILLIGN+V HLTDIK+WL TQFQMKDL +A
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 7.6e-81 | 87.71 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQAGKVQTFKARL+AKGYTQKEGI+YEE FS A+IKSIRILL IATFYDYEIWQMDVKTTFLN NLEESIYMVQP+ FIQKGQEQK+CKLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NSTV FLVLYVDDILLIGNDV HL DIKKWL QFQMKDL NA
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-77 | 81.01 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRD AGKVQTFKARL+AKGYTQ+EG++YEETFSPVA++KSIRILL IATFYDYEIWQMDVKT FLN NLEESI+M QP+GFI +GQEQKVCKL +SIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I V FLVLYVDDILLIGNDV +LTD+K WL QFQMKDL A
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TK28 Gag/pol protein | 5.3e-80 | 84.92 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQAGKVQTFKARL+ KGY +KEG+NY+ETFSPV ++KSIRILL I TFYDYEI QMDVKT FLN NLEESIYMVQP+GFIQKGQEQKV KLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDTAIKSYGFE NVDEPCVYKRII STV FLVL VD+ILLIGND+ HLT+IKKWL TQFQMKDLENA
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| A0A5A7TTA2 Gag/pol protein | 1.6e-84 | 88.27 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQ KVQTF+ARL+AKGYTQKEGI+YEETFSP+A+IKSIRILL IATFYDYEIWQMDVKT FLN NLEESIYMVQP+GFIQKGQEQKVCKLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDT IKSYGFEQNVDEPCVYKRIINSTV FLVLYVDDILLIGN+V HLTDIK+WL TQFQMKDL +A
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| A0A5A7TZD0 Gag/pol protein | 8.4e-78 | 81.01 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRD AGKVQTFKARL+AKGYTQ+EG++YEETFSPVA++KSIRILL IATFYDYEIWQMDVKT FLN NLEESI+M QP+GFI +GQEQKVCKL +SIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYK+I V FLVLYVDDILLIGNDV +LTD+K WL QFQMKDL A
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| A0A5D3BX45 Gag/pol protein | 3.7e-81 | 87.71 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQAGKVQTFKARL+AKGYTQKEGI+YEE FS A+IKSIRILL IATFYDYEIWQMDVKTTFLN NLEESIYMVQP+ FIQKGQEQK+CKLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NSTV FLVLYVDDILLIGNDV HL DIKKWL QFQMKDL NA
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| E2GK51 Gag/pol protein (Fragment) | 1.5e-82 | 85.47 | Show/hide |
Query: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
+ KRDQAGKVQTFKARL+AKGYTQKEG++YEETFSPVA++KSIRILL IATFY+YEIWQMDVKT FLN NLEESIYMVQP+GFI + QEQKVCKLQKSIY
Subjt: QEKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIY
Query: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS V FL+LYVDDILLIGNDV +LTD+KKWL TQFQMKDL A
Subjt: GLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLENA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.0e-33 | 42.94 | Show/hide |
Query: KRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYGL
K ++ G +KARL+A+G+TQK I+YEETF+PVA I S R +L + Y+ ++ QMDVKT FLN L+E IYM P+G VCKL K+IYGL
Subjt: KRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYGL
Query: KQASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDL
KQA+R W F+ A+K F + + C+Y K IN + +++LYVDD+++ D++ + + K++L+ +F+M DL
Subjt: KQASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-39 | 47.43 | Show/hide |
Query: KRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYGL
K+D K+ +KARL+ KG+ QK+GI+++E FSPV + SIR +L +A D E+ Q+DVKT FL+ +LEE IYM QP+GF G++ VCKL KS+YGL
Subjt: KRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYGL
Query: KQASRSWNIRFDTAIKSYGFEQNVDEPCVY-KRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDL
KQA R W ++FD+ +KS + + +PCVY KR + L+LYVDD+L++G D + +K L F MKDL
Subjt: KQASRSWNIRFDTAIKSYGFEQNVDEPCVY-KRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.4e-13 | 35.04 | Show/hide |
Query: MDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSH
MDV T FLN ++E IY+ QP GF+ + V +L +YGLKQA WN + +K GF ++ E +Y R + ++ +YVDD+L+
Subjt: MDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSH
Query: LTDIKKWLVTQFQMKDL
+K+ L + MKDL
Subjt: LTDIKKWLVTQFQMKDL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.0e-32 | 40.34 | Show/hide |
Query: EKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYG
+K + G + +KARL+AKGY Q+ G++Y ETFSPV SIRI+L +A + I Q+DV FL L + +YM QP GFI K + VCKL+K++YG
Subjt: EKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYG
Query: LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLE
LKQA R+W + + + GF +V + ++ ++ ++++YVDDIL+ GND + L + L +F +KD E
Subjt: LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-31 | 38.98 | Show/hide |
Query: EKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYG
+K + G + +KARL+AKGY Q+ G++Y ETFSPV SIRI+L +A + I Q+DV FL L + +YM QP GF+ K + VC+L+K+IYG
Subjt: EKRDQAGKVQTFKARLMAKGYTQKEGINYEETFSPVAIIKSIRILLPIATFYDYEIWQMDVKTTFLNCNLEESIYMVQPKGFIQKGQEQKVCKLQKSIYG
Query: LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLEN
LKQA R+W + T + + GF ++ + ++ ++ ++++YVDDIL+ GND L L +F +K+ E+
Subjt: LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVTFLVLYVDDILLIGNDVSHLTDIKKWLVTQFQMKDLEN
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