CuGenDBv2

Gene ID	Cmc06g0165771
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr06:17741870..17743393
RNA-Seq Expression	Cmc06g0165771
Synteny	Cmc06g0165771
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process) GO:0000502 - proteasome complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0036402 - proteasome-activating ATPase activity (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025848.1 pol protein [Cucumis melo var. makuwa]

5.6e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

KAA0031437.1 pol protein [Cucumis melo var. makuwa]

5.6e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

KAA0033825.1 pol protein [Cucumis melo var. makuwa]

5.6e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

TYK28368.1 pol protein [Cucumis melo var. makuwa]

5.6e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

TYK28422.1 pol protein [Cucumis melo var. makuwa]

5.6e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEQ2 Reverse transcriptase

2.7e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

A0A5A7TSL0 Reverse transcriptase

2.7e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

A0A5A7UBS1 Reverse transcriptase

2.7e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

A0A5D3CQB5 Reverse transcriptase

2.7e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

A0A5D3DY07 Reverse transcriptase

2.7e-291

99.21

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV  TEQGEGFSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWG
        SKWG
Subjt:  SKWG

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

8.3e-72

31.72

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +KR     +  +G  I+S      + ++ +P D+ + 
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL
          ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASK
        +K A  VP   + TA +
Subjt:  TKSAHFVPGKSTYTASK

P0CT35 Transposon Tf2-2 polyprotein

8.3e-72

31.72

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +KR     +  +G  I+S      + ++ +P D+ + 
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL
          ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASK
        +K A  VP   + TA +
Subjt:  TKSAHFVPGKSTYTASK

P0CT36 Transposon Tf2-3 polyprotein

8.3e-72

31.72

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +KR     +  +G  I+S      + ++ +P D+ + 
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL
          ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASK
        +K A  VP   + TA +
Subjt:  TKSAHFVPGKSTYTASK

P0CT37 Transposon Tf2-4 polyprotein

8.3e-72

31.72

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +KR     +  +G  I+S      + ++ +P D+ + 
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL
          ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASK
        +K A  VP   + TA +
Subjt:  TKSAHFVPGKSTYTASK

P0CT41 Transposon Tf2-12 polyprotein

8.3e-72

31.72

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +KR     +  +G  I+S      + ++ +P D+ + 
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYL------AEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVK

Query:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL
          ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR 
Subjt:  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRL

Query:  TKSAHFVPGKSTYTASK
        +K A  VP   + TA +
Subjt:  TKSAHFVPGKSTYTASK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

7.1e-26

43.2

Show/hide

Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACERSFQELKQKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACERSFQELKQKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACCGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCAT
TTACTCAAAAACTGAGGCGGAGCACGAGGAGCACCTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGA
AGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGA
AGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCC
AGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCGGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGA
AGGGACTGGGCTGTGTTCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCT
GTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACAT
GAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCAAATGTAGTGGCTGATGCGCTGAGTAGGAAAGTTGCACATT
CAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCGGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTAGCTCAGTTGACAGTTCAG
CCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTACTTGGCAGAGAAGCGTCGCGTGGCTATGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCTGA
CGGTGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTA
CGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCCAGG
CAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGT
GATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGCAGCTATATATGA

mRNA sequence

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Protein sequence

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MSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAA
VVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQ
PTLRQKIIAAQLNDPYLAEKRRVAMTEQGEGFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPR
QHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGSYI

Cmc06g0165771 (gene) of Melon (Charmono) v1.1 genome