; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0165991 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0165991
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:18083926..18085129
RNA-Seq ExpressionCmc06g0165991
SyntenyCmc06g0165991
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000502 - proteasome complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR041588 - Integrase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR012337 - Ribonuclease H-like superfamily
IPR001584 - Integrase, catalytic core


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025848.1 pol protein [Cucumis melo var. makuwa]1.6e-21396.82Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

KAA0031437.1 pol protein [Cucumis melo var. makuwa]1.6e-21396.82Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

KAA0033825.1 pol protein [Cucumis melo var. makuwa]1.6e-21396.82Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

KAA0048442.1 pol protein [Cucumis melo var. makuwa]4.5e-21698.14Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

TYK20443.1 pol protein [Cucumis melo var. makuwa]1.6e-21396.55Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

TrEMBL top hitse value%identityAlignment
A0A5A7TEQ2 Reverse transcriptase7.7e-21496.82Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

A0A5A7TSL0 Reverse transcriptase7.7e-21496.82Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

A0A5A7TY28 Reverse transcriptase2.2e-21698.14Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

A0A5A7UBS1 Reverse transcriptase7.7e-21496.82Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

A0A5D3CQB5 Reverse transcriptase7.7e-21496.82Show/hide
Query:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMT+IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS
        RQKSYADVRRKDLEFEVGDMV LKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAA   ++  S
Subjt:  RQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTS

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.5e-5232.44Show/hide
Query:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV

Query:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++  +++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTE
Subjt:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE

Query:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V++K     G L   K  KL+P F GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

P0CT35 Transposon Tf2-2 polyprotein1.5e-5232.44Show/hide
Query:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV

Query:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++  +++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTE
Subjt:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE

Query:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V++K     G L   K  KL+P F GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

P0CT36 Transposon Tf2-3 polyprotein1.5e-5232.44Show/hide
Query:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV

Query:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++  +++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTE
Subjt:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE

Query:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V++K     G L   K  KL+P F GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

P0CT41 Transposon Tf2-12 polyprotein1.5e-5232.44Show/hide
Query:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV

Query:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++  +++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTE
Subjt:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE

Query:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V++K     G L   K  KL+P F GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

Q9UR07 Transposon Tf2-11 polyprotein1.5e-5232.44Show/hide
Query:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV
        +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+
Subjt:  SISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESV

Query:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE
        SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++  +++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTE
Subjt:  SMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTE

Query:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD
        R NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D
Subjt:  RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYAD

Query:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH
        ++ +++ EF+ GD+V++K     G L   K  KL+P F GPF +L++ GP  Y L LP S    +HM+ ++ H
Subjt:  VRRKDL-EFEVGDMVLLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTT
GACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGTATGAAGAGGGATGTGGCAGACT
TTGTCAGTAGGTGCTTGGTGTGCCAGCAGGTAAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTTTCGATG
GATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAGTCCACTTACAC
TGCCAGTAAGTGGGGGCAGTTATACATGACAAAGATTGTGAGACTACACGGAGTACCCGTATCCATCATTTCAGACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAGG
GACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCCCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATATGCTGCGGGCC
TGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTA
TGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTC
GTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCCTTCTGAAGGTTGCACCCATGAAGGGT
GTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCTTT
TGCTGCAACCCAACACATGTGGTGGACTTCGAGCCACTGCAGATTAGCGAGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTT
GACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGTATGAAGAGGGATGTGGCAGACT
TTGTCAGTAGGTGCTTGGTGTGCCAGCAGGTAAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTTTCGATG
GATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAGTCCACTTACAC
TGCCAGTAAGTGGGGGCAGTTATACATGACAAAGATTGTGAGACTACACGGAGTACCCGTATCCATCATTTCAGACAGAGACGCTCGTTTCACATCGAAGTTCTGGAAGG
GACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCCCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGATATGCTGCGGGCC
TGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTA
TGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTC
GTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCCTTCTGAAGGTTGCACCCATGAAGGGT
GTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCTTT
TGCTGCAACCCAACACATGTGGTGGACTTCGAGCCACTGCAGATTAGCGAGAACTTGA
Protein sequenceShow/hide protein sequence
MVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSM
DFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRA
CVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVLLKVAPMKG
VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAATQHMWWTSSHCRLART