CuGenDBv2

Gene ID	Cmc06g0166211
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr06:18504822..18507005
RNA-Seq Expression	Cmc06g0166211
Synteny	Cmc06g0166211
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031931.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.32

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA PLTQLTRKG  FVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT QLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPG+TKMYQDLKRVYWWRN+KREVAEFVS+CLVC+QVKAPRQKPA LLQ LSIPEWKWEN+SMDFITG PRTLRGF VIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YTASKWAQLYMSEIVRLHGV VSIV DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGM PFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

KAA0037291.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.32

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KI+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGV FVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRK+SHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPS SAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWR++KR+VAEFVS+CLVC+QVKAPRQKPA LLQ LSIPEWKWENVSMDFITG PRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YTASKWAQLYMSEIVRLHGV VSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGMAPFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

KAA0048479.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

99.86

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPG+TKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGMAPFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.87

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG  FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPG+TKMY+D+KRVYWWRN+KREVAEFVSRCLVC+QVKAPRQKPA LLQ LSIPEWKWENVSMDFITG PRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YTASKWAQLYMSEIVRLHGV VSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEF YNNSYQATIGMAPFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.46

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKG  FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPG+TKMYQDLKR+YWWRN+KREVAEFVS+CLVC+QVKAPRQKPA LLQ LSIPEWKWENVSMDFI G PRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YT SKWAQLYMSEIVRLHGV VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGMAPFEALY KCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQU8 Reverse transcriptase

0.0e+00

95.32

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA PLTQLTRKG  FVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT QLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPG+TKMYQDLKRVYWWRN+KREVAEFVS+CLVC+QVKAPRQKPA LLQ LSIPEWKWEN+SMDFITG PRTLRGF VIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YTASKWAQLYMSEIVRLHGV VSIV DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGM PFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

A0A5A7T6R9 Reverse transcriptase

0.0e+00

95.32

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KI+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGV FVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRK+SHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPS SAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWR++KR+VAEFVS+CLVC+QVKAPRQKPA LLQ LSIPEWKWENVSMDFITG PRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YTASKWAQLYMSEIVRLHGV VSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGMAPFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

A0A5A7U330 Reverse transcriptase

0.0e+00

95.87

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG  FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPG+TKMY+D+KRVYWWRN+KREVAEFVSRCLVC+QVKAPRQKPA LLQ LSIPEWKWENVSMDFITG PRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YTASKWAQLYMSEIVRLHGV VSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEF YNNSYQATIGMAPFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

A0A5A7U4W0 Pol protein

0.0e+00

99.86

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPG+TKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGMAPFEALYGKCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

A0A5A7UP94 Pol protein

0.0e+00

95.46

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
        T FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI+DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKG  FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF  HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPG+TKMYQDLKR+YWWRN+KREVAEFVS+CLVC+QVKAPRQKPA LLQ LSIPEWKWENVSMDFI G PRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLT

Query:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH
        KS HFVP KS YT SKWAQLYMSEIVRLHGV VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACAL+FPGSWDSHLH
Subjt:  KSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCC
        LMEFAYNNSYQATIGMAPFEALY KCC
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCC

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

8.2e-121

32.97

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
          FR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I   H++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ I++++ E+V  C  C+  K+   KP   LQ +   E  WE++SMDFIT  P +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF

Query:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K    VP     TA + A+++   ++   G    I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT35 Transposon Tf2-2 polyprotein

8.2e-121

32.97

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
          FR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I   H++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ I++++ E+V  C  C+  K+   KP   LQ +   E  WE++SMDFIT  P +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF

Query:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K    VP     TA + A+++   ++   G    I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT36 Transposon Tf2-3 polyprotein

8.2e-121

32.97

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
          FR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I   H++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ I++++ E+V  C  C+  K+   KP   LQ +   E  WE++SMDFIT  P +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF

Query:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K    VP     TA + A+++   ++   G    I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT37 Transposon Tf2-4 polyprotein

8.2e-121

32.97

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
          FR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I   H++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ I++++ E+V  C  C+  K+   KP   LQ +   E  WE++SMDFIT  P +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF

Query:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K    VP     TA + A+++   ++   G    I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT41 Transposon Tf2-12 polyprotein

8.2e-121

32.97

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++Q +T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG
          FR   G +E++VM +G++ APA F   +N +  E  ++ V+ +++DILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAG

Query:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K V + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I   H++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFIGHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ I++++ E+V  C  C+  K+   KP   LQ +   E  WE++SMDFIT  P +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQVKAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGF

Query:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K    VP     TA + A+++   ++   G    I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  KFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

4.1e-27

45.8

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL--RHVVSKAGVSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVW
        HL MVLQ    ++ YA   KC F   Q+++L  RH++S  GVS DP K+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K  S  W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL--RHVVSKAGVSVDPTKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTACAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTAC
AGGAAGCTACAGTGTTCTCTAAGATTGATCTTCGATCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAACATTTCGTTCCAGATACGGACACTAT
GAGTTCATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATTAA
TGATATCTTGATATACTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTAGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGT
TTTGGCTGAAGCAGGTGTCCTTCCTACGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAACTAAAATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGGCGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGTTTCTTT
TGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAATCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTG
ATGCTTCCAAGAAAGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTAGCTTATGCTTCGCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTA
GAGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTGTATGGTGAGAAGATACAGATCTTCATAGGTCATAAGAGCTTGAAATACTTCTTCACCCAGAA
GGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATCATCCAGGTAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAA
AGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCTCAG
TTGACAGTACAGCTGACGTTGAGGCAAAGGATCATTGATGCTCAGCGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTC
CATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGC
ACCCAGGTAATACGAAGATGTATCAGGACTTGAAGCGGGTTTATTGGTGGCGTAACATAAAGAGGGAGGTAGCAGAATTTGTCAGTAGATGCTTGGTGTGTCGGCAGGTT
AAGGCACCAAGGCAGAAACCAGCGAGTTTATTACAACTTTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACCGCCGAGAACTCTGAG
GGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGTGCACTTCGTTCCGAGTAAATCCATCTATACTGCTAGTAAGTGGGCACAACTGTACATGTCTG
AGATAGTGAGATTGCATGGAGTGCTAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGAC
TTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGAAATTTCCAGGTAGCTGGGACTC
CCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFINDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLRHVVSKAGVSVDPTKIEAVTGWTRPSTV
SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVSFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDL
ELAAVVFALKIWRHYLYGEKIQIFIGHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ
LTVQLTLRQRIIDAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGNTKMYQDLKRVYWWRNIKREVAEFVSRCLVCRQV
KAPRQKPASLLQLLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLTKSVHFVPSKSIYTASKWAQLYMSEIVRLHGVLVSIVSDRDARFTSKFWKGLQTAMGTRLD
FSTAFHPQTDGQTERLNQVLEDMLRACALKFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCC

Cmc06g0166211 (gene) of Melon (Charmono) v1.1 genome