; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0166341 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0166341
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr06:18716711..18718267
RNA-Seq ExpressionCmc06g0166341
SyntenyCmc06g0166341
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032332.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-24076.74Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        H+  VL VL++HELYAN+KKC FAQ+K+EYLGH+ISGEGV VDPEKIK+I  WP+ TN+KE RGFLGLTGYYRRFV+NYG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF+RLK AM SLPVLALP+FN+ FEIE DASGYGVGAVLIQ +RP+AY+SHTLALRDR RPVYEREL+A++LA+QRWRPYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS PVT+DL++IK+E+ QD K+++++ +L   E+ Q   YSLQ  +L YK
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
          LVI + SSL P IL+T+HN  VGGH GFLRTYKR++++LYW+GMK +IKKHCEECL CQRNK +ALSPAGLLVPLEIPQ IW++ISMDFVEGLPK+NG
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        +EVILVVVDRLSKYGHFLPLKHPFTAKVVA+LFV+E+VRLHGFP+SIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKPKEW+KWLPWT+Y
Subjt:  NEKPKEWVKWLPWTKY

KAA0039975.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.9e-24276.94Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        HM KVL+VL+ HEL+AN+KKC FAQQK+EYLGH+ISGEGV VDPEKIK+I+ WP+ TN+KE RGFLGLTGYYRRFV++YG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF RLK AM SLPVLALP+F++ FEIE DASGYGVGAVL+Q KRP+AYYSHTLALRDR+RPVYEREL+AV+LA+QRWRPYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS P+ +DLE++KKE+ QDPK++K++ ++ + E+ + + YSL+  +L +K
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
        + LVI K SSLIP ILDT+HN  +GGH GFLRTYKR++++LYW GMK DIKKHCEECL+CQR+K LALSPAGLLVPLEIPQAIW+DISMDFVEGLPK++G
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        +EVILVVVDRLSKYGHFLPLKHP+TAK+VA+LFV+E+VRLHGFPLSIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKP+EWV+WLPWT+Y
Subjt:  NEKPKEWVKWLPWTKY

KAA0048504.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]2.0e-28397.41Show/hide
Query:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWS
        MEHMTKVLSVL+EHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYR FVQNYGAIAAPLTQLLKKGGYKWS
Subjt:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWS

Query:  DEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSL
        DEAEDAFERLKKAMSSLPVLALP+FNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYEREL+AVILA+QRWRPYLLRGKFKVK DQKSL
Subjt:  DEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSL

Query:  KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLK
        KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVT+DLELIKKE+HQDPKFQKLMAELRELEDRQGSKYSLQNDVLK
Subjt:  KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLK

Query:  YKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKA
        YKDGLVITKTSSLIPTI+DTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKA
Subjt:  YKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKA

Query:  NGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRC
        NGFEVILV+VDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDK  LSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLR 
Subjt:  NGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRC

Query:  F
        F
Subjt:  F

TYK06640.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.9e-24276.94Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        HM KVL+VL+ HEL+AN+KKC FAQQK+EYLGH+ISGEGV VDPEKIK+I+ WP+ TN+KE RGFLGLTGYYRRFV++YG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF RLK AM SLPVLALP+F++ FEIE DASGYGVGAVL+Q KRP+AYYSHTLALRDR+RPVYEREL+AV+LA+QRWRPYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS P+ +DLE++KKE+ QDPK++K++ ++ + E+ + + YSL+  +L +K
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
        + LVI K SSLIP ILDT+HN  +GGH GFLRTYKR++++LYW GMK DIKKHCEECL+CQR+K LALSPAGLLVPLEIPQAIW+DISMDFVEGLPK++G
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        +EVILVVVDRLSKYGHFLPLKHP+TAK+VA+LFV+E+VRLHGFPLSIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKP+EWV+WLPWT+Y
Subjt:  NEKPKEWVKWLPWTKY

TYK18846.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]8.3e-24277.13Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        HM KVL+VL+ HEL+AN+KKC FAQQK+EYLGH+ISGEGV VDPEKIK+I+ WP+ TN+KE+RGFLGLTGYYRRFV+NYG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF RLK AM SLPVLALP+F++ FEIE DASGYGVGAVL+Q KRP+AYYSHTLALRDR+RPVYEREL+AV+LA+QRW PYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS P+ +DLE++KKE+ QDPK++K++ ++ + E+ + + YSL+  +L YK
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
        + LVI K SSLIP ILDT+HN  +GGH GFLRTYKR++++LYW GMK DIKK+CEECL+CQR+K LALSPAGLLVPLEIPQAIW+DISMDFVEGLPK++G
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        FEVILVVVDRLSKYGHFLPLKHP+TAK+VA+LFV+E+VRLHGFPLSIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKPKEWV+WL WT+Y
Subjt:  NEKPKEWVKWLPWTKY

TrEMBL top hitse value%identityAlignment
A0A5A7SMR6 Ty3/gypsy retrotransposon protein5.8e-24176.74Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        H+  VL VL++HELYAN+KKC FAQ+K+EYLGH+ISGEGV VDPEKIK+I  WP+ TN+KE RGFLGLTGYYRRFV+NYG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF+RLK AM SLPVLALP+FN+ FEIE DASGYGVGAVLIQ +RP+AY+SHTLALRDR RPVYEREL+A++LA+QRWRPYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS PVT+DL++IK+E+ QD K+++++ +L   E+ Q   YSLQ  +L YK
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
          LVI + SSL P IL+T+HN  VGGH GFLRTYKR++++LYW+GMK +IKKHCEECL CQRNK +ALSPAGLLVPLEIPQ IW++ISMDFVEGLPK+NG
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        +EVILVVVDRLSKYGHFLPLKHPFTAKVVA+LFV+E+VRLHGFP+SIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKPKEW+KWLPWT+Y
Subjt:  NEKPKEWVKWLPWTKY

A0A5A7TET8 Ty3/gypsy retrotransposon protein2.4e-24276.94Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        HM KVL+VL+ HEL+AN+KKC FAQQK+EYLGH+ISGEGV VDPEKIK+I+ WP+ TN+KE RGFLGLTGYYRRFV++YG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF RLK AM SLPVLALP+F++ FEIE DASGYGVGAVL+Q KRP+AYYSHTLALRDR+RPVYEREL+AV+LA+QRWRPYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS P+ +DLE++KKE+ QDPK++K++ ++ + E+ + + YSL+  +L +K
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
        + LVI K SSLIP ILDT+HN  +GGH GFLRTYKR++++LYW GMK DIKKHCEECL+CQR+K LALSPAGLLVPLEIPQAIW+DISMDFVEGLPK++G
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        +EVILVVVDRLSKYGHFLPLKHP+TAK+VA+LFV+E+VRLHGFPLSIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKP+EWV+WLPWT+Y
Subjt:  NEKPKEWVKWLPWTKY

A0A5A7TZP3 Transposon Tf2-1 polyprotein isoform X19.5e-28497.41Show/hide
Query:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWS
        MEHMTKVLSVL+EHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYR FVQNYGAIAAPLTQLLKKGGYKWS
Subjt:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWS

Query:  DEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSL
        DEAEDAFERLKKAMSSLPVLALP+FNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYEREL+AVILA+QRWRPYLLRGKFKVK DQKSL
Subjt:  DEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSL

Query:  KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLK
        KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVT+DLELIKKE+HQDPKFQKLMAELRELEDRQGSKYSLQNDVLK
Subjt:  KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLK

Query:  YKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKA
        YKDGLVITKTSSLIPTI+DTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKA
Subjt:  YKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKA

Query:  NGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRC
        NGFEVILV+VDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDK  LSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLR 
Subjt:  NGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRC

Query:  F
        F
Subjt:  F

A0A5D3D5P9 Ty3/gypsy retrotransposon protein4.0e-24277.13Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        HM KVL+VL+ HEL+AN+KKC FAQQK+EYLGH+ISGEGV VDPEKIK+I+ WP+ TN+KE+RGFLGLTGYYRRFV+NYG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF RLK AM SLPVLALP+F++ FEIE DASGYGVGAVL+Q KRP+AYYSHTLALRDR+RPVYEREL+AV+LA+QRW PYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS P+ +DLE++KKE+ QDPK++K++ ++ + E+ + + YSL+  +L YK
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
        + LVI K SSLIP ILDT+HN  +GGH GFLRTYKR++++LYW GMK DIKK+CEECL+CQR+K LALSPAGLLVPLEIPQAIW+DISMDFVEGLPK++G
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        FEVILVVVDRLSKYGHFLPLKHP+TAK+VA+LFV+E+VRLHGFPLSIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKPKEWV+WL WT+Y
Subjt:  NEKPKEWVKWLPWTKY

A0A5D3DLL9 Ty3/gypsy retrotransposon protein2.4e-24276.94Show/hide
Query:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE
        HM KVL+VL+ HEL+AN+KKC FAQQK+EYLGH+ISGEGV VDPEKIK+I+ WP+ TN+KE RGFLGLTGYYRRFV++YG IAAPLTQLLKKGG+ W++E
Subjt:  HMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDE

Query:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF
        A  AF RLK AM SLPVLALP+F++ FEIE DASGYGVGAVL+Q KRP+AYYSHTLALRDR+RPVYEREL+AV+LA+QRWRPYLL GKF+VKTDQK+LKF
Subjt:  AEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKF

Query:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK
        LL+QR+IQPQY+ WIAKLLGYSFEVVYKPG ENRAADALSR P EV+L GLS P+ +DLE++KKE+ QDPK++K++ ++ + E+ + + YSL+  +L +K
Subjt:  LLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYK

Query:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG
        + LVI K SSLIP ILDT+HN  +GGH GFLRTYKR++++LYW GMK DIKKHCEECL+CQR+K LALSPAGLLVPLEIPQAIW+DISMDFVEGLPK++G
Subjt:  DGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANG

Query:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC
        +EVILVVVDRLSKYGHFLPLKHP+TAK+VA+LFV+E+VRLHGFPLSIVSDRDK  LS FW ELFRLSGTKLNKSTAYHPQ+DGQTEVVNRGVETYLRCFC
Subjt:  FEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFC

Query:  NEKPKEWVKWLPWTKY
        NEKP+EWV+WLPWT+Y
Subjt:  NEKPKEWVKWLPWTKY

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.6e-7032.09Show/hide
Query:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKG-GYKW
        ++H+  VL  LK   L  N+ KC F Q +V+++G+ IS +G     E I  + +W +  N KE+R FLG   Y R+F+     +  PL  LLKK   +KW
Subjt:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKG-GYKW

Query:  SDEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAK-----RPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYL--LRGKFK
        +     A E +K+ + S PVL   +F++   +ETDAS   VGAVL Q        P+ YYS  ++       V ++E++A+I +++ WR YL      FK
Subjt:  SDEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAK-----RPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYL--LRGKFK

Query:  VKTDQKSL--KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLE------LIKKEMHQDPKFQ---------
        + TD ++L  +   E      +   W   L  ++FE+ Y+PG+ N  ADALSRI  E E      P+  D E      + +  +  D K Q         
Subjt:  VKTDQKSL--KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLE------LIKKEMHQDPKFQ---------

Query:  KLMAELRELEDRQGSKYSLQNDVL-KYKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAG
        KL+  L   + R      L++ +L   KD +++   + L  TI+  YH      H G       +     W+G++  I+++ + C  CQ NK     P G
Subjt:  KLMAELRELEDRQGSKYSLQNDVL-KYKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAG

Query:  LLVPLEIPQAIWNDISMDFVEGLPKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLN
         L P+   +  W  +SMDF+  LP+++G+  + VVVDR SK    +P     TA+  A++F + V+   G P  I++D D    S  W++        + 
Subjt:  LLVPLEIPQAIWNDISMDFVEGLPKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLN

Query:  KSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWV
         S  Y PQTDGQTE  N+ VE  LRC C+  P  WV
Subjt:  KSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWV

P0CT41 Transposon Tf2-12 polyprotein3.6e-7032.09Show/hide
Query:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKG-GYKW
        ++H+  VL  LK   L  N+ KC F Q +V+++G+ IS +G     E I  + +W +  N KE+R FLG   Y R+F+     +  PL  LLKK   +KW
Subjt:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKG-GYKW

Query:  SDEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAK-----RPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYL--LRGKFK
        +     A E +K+ + S PVL   +F++   +ETDAS   VGAVL Q        P+ YYS  ++       V ++E++A+I +++ WR YL      FK
Subjt:  SDEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAK-----RPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYL--LRGKFK

Query:  VKTDQKSL--KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLE------LIKKEMHQDPKFQ---------
        + TD ++L  +   E      +   W   L  ++FE+ Y+PG+ N  ADALSRI  E E      P+  D E      + +  +  D K Q         
Subjt:  VKTDQKSL--KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLE------LIKKEMHQDPKFQ---------

Query:  KLMAELRELEDRQGSKYSLQNDVL-KYKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAG
        KL+  L   + R      L++ +L   KD +++   + L  TI+  YH      H G       +     W+G++  I+++ + C  CQ NK     P G
Subjt:  KLMAELRELEDRQGSKYSLQNDVL-KYKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAG

Query:  LLVPLEIPQAIWNDISMDFVEGLPKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLN
         L P+   +  W  +SMDF+  LP+++G+  + VVVDR SK    +P     TA+  A++F + V+   G P  I++D D    S  W++        + 
Subjt:  LLVPLEIPQAIWNDISMDFVEGLPKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLN

Query:  KSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWV
         S  Y PQTDGQTE  N+ VE  LRC C+  P  WV
Subjt:  KSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein4.2e-7132.85Show/hide
Query:  EHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSD
        +H+  VL  LK   L   KKKC FA ++ E+LG+ I  + +     K  +I  +P    +K+ + FLG+  YYRRF+ N   IA P+ QL      +W++
Subjt:  EHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSD

Query:  EAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRP------IAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGK-FKVK
        + + A E+LK A+ + PVL   N    + + TDAS  G+GAVL +          + Y+S +L    +  P  E EL+ +I A+  +R Y+L GK F ++
Subjt:  EAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRP------IAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGK-FKVK

Query:  TDQKSLKFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELREL-------EDR
        TD  SL  L  +     + + W+  L  Y F + Y  G +N  ADA+SR    +  +  S P+  D E  K     DP    ++  ++EL       ED 
Subjt:  TDQKSLKFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELREL-------EDR

Query:  QG---------------SKYSLQNDVLKYKDGLVITKTSSLIPTILDTYHNFVV-GGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALS
                           YSL+++++ Y+D LV+         ++  YH+  + GGHFG   T  ++S   YW  ++  I ++   C+ CQ  K     
Subjt:  QG---------------SKYSLQNDVLKYKDGLVITKTSSLIPTILDTYHNFVV-GGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALS

Query:  PAGLLVPLEIPQAIWNDISMDFVEGL-PKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSG
          GLL PL I +  W DISMDFV GL P +N   +ILVVVDR SK  HF+  +    A  +  L  R +   HGFP +I SDRD ++ +  +QEL +  G
Subjt:  PAGLLVPLEIPQAIWNDISMDFVEGL-PKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSG

Query:  TKLNKSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWVKWLPWTKY
         K   S+A HPQTDGQ+E   + +   LR + +   + W  +LP  ++
Subjt:  TKLNKSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWVKWLPWTKY

Q99315 Transposon Ty3-G Gag-Pol polyprotein5.5e-7132.66Show/hide
Query:  EHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSD
        +H+  VL  LK   L   KKKC FA ++ E+LG+ I  + +     K  +I  +P    +K+ + FLG+  YYRRF+ N   IA P+ QL      +W++
Subjt:  EHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSD

Query:  EAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRP------IAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGK-FKVK
        + + A ++LK A+ + PVL   N    + + TDAS  G+GAVL +          + Y+S +L    +  P  E EL+ +I A+  +R Y+L GK F ++
Subjt:  EAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRP------IAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGK-FKVK

Query:  TDQKSLKFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELREL-------EDR
        TD  SL  L  +     + + W+  L  Y F + Y  G +N  ADA+SR    +  +  S P+  D E  K     DP    ++  ++EL       ED 
Subjt:  TDQKSLKFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELREL-------EDR

Query:  QG---------------SKYSLQNDVLKYKDGLVITKTSSLIPTILDTYHNFVV-GGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALS
                           YSL+++++ Y+D LV+         ++  YH+  + GGHFG   T  ++S   YW  ++  I ++   C+ CQ  K     
Subjt:  QG---------------SKYSLQNDVLKYKDGLVITKTSSLIPTILDTYHNFVV-GGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALS

Query:  PAGLLVPLEIPQAIWNDISMDFVEGL-PKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSG
          GLL PL I +  W DISMDFV GL P +N   +ILVVVDR SK  HF+  +    A  +  L  R +   HGFP +I SDRD ++ +  +QEL +  G
Subjt:  PAGLLVPLEIPQAIWNDISMDFVEGL-PKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSG

Query:  TKLNKSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWVKWLPWTKY
         K   S+A HPQTDGQ+E   + +   LR + +   + W  +LP  ++
Subjt:  TKLNKSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWVKWLPWTKY

Q9UR07 Transposon Tf2-11 polyprotein3.6e-7032.09Show/hide
Query:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKG-GYKW
        ++H+  VL  LK   L  N+ KC F Q +V+++G+ IS +G     E I  + +W +  N KE+R FLG   Y R+F+     +  PL  LLKK   +KW
Subjt:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKG-GYKW

Query:  SDEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAK-----RPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYL--LRGKFK
        +     A E +K+ + S PVL   +F++   +ETDAS   VGAVL Q        P+ YYS  ++       V ++E++A+I +++ WR YL      FK
Subjt:  SDEAEDAFERLKKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAK-----RPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYL--LRGKFK

Query:  VKTDQKSL--KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLE------LIKKEMHQDPKFQ---------
        + TD ++L  +   E      +   W   L  ++FE+ Y+PG+ N  ADALSRI  E E      P+  D E      + +  +  D K Q         
Subjt:  VKTDQKSL--KFLLEQRVIQPQYKNWIAKLLGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLE------LIKKEMHQDPKFQ---------

Query:  KLMAELRELEDRQGSKYSLQNDVL-KYKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAG
        KL+  L   + R      L++ +L   KD +++   + L  TI+  YH      H G       +     W+G++  I+++ + C  CQ NK     P G
Subjt:  KLMAELRELEDRQGSKYSLQNDVL-KYKDGLVITKTSSLIPTILDTYHNFVVGGHFGFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAG

Query:  LLVPLEIPQAIWNDISMDFVEGLPKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLN
         L P+   +  W  +SMDF+  LP+++G+  + VVVDR SK    +P     TA+  A++F + V+   G P  I++D D    S  W++        + 
Subjt:  LLVPLEIPQAIWNDISMDFVEGLPKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVVRLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLN

Query:  KSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWV
         S  Y PQTDGQTE  N+ VE  LRC C+  P  WV
Subjt:  KSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWV

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.7e-3855.73Show/hide
Query:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLG--HIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYK
        M H+  VL + ++H+ YAN+KKC+F Q ++ YLG  HIISGEGV  DP K++++  WP+  N  E+RGFLGLTGYYRRFV+NYG I  PLT+LLKK   K
Subjt:  MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLG--HIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYK

Query:  WSDEAEDAFERLKKAMSSLPVLALPNFNQPF
        W++ A  AF+ LK A+++LPVLALP+   PF
Subjt:  WSDEAEDAFERLKKAMSSLPVLALPNFNQPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACATATGACAAAAGTGTTGTCCGTACTAAAAGAACATGAGTTGTACGCAAACAAGAAGAAATGCAGTTTTGCTCAGCAAAAGGTGGAATATTTAGGCCATATTAT
ATCCGGAGAAGGGGTTGAAGTGGACCCGGAGAAGATCAAGTCAATTACTAAGTGGCCAAAACGTACGAACATCAAAGAAGTTAGAGGTTTTTTGGGGCTCACAGGATATT
ATCGACGTTTCGTACAGAACTATGGAGCTATTGCAGCACCATTGACTCAGTTGTTGAAAAAGGGGGGATATAAATGGTCTGATGAAGCTGAGGATGCATTTGAACGGCTA
AAAAAAGCAATGTCATCTCTTCCAGTGTTGGCACTACCAAACTTTAATCAGCCTTTTGAAATAGAAACCGATGCTTCAGGCTATGGTGTTGGAGCAGTGCTAATTCAGGC
GAAGAGACCAATTGCATACTATAGTCATACGTTAGCCTTGAGGGATAGAGCCCGGCCTGTGTACGAGAGGGAATTAGTGGCTGTGATATTAGCCATCCAACGCTGGAGAC
CCTACTTATTGAGAGGAAAATTCAAGGTGAAAACTGATCAGAAGTCGCTGAAGTTTTTATTGGAACAGAGGGTTATCCAACCTCAATACAAAAACTGGATAGCAAAACTT
TTGGGGTACTCCTTTGAAGTAGTGTACAAGCCAGGTGCTGAAAATCGGGCTGCAGATGCCCTTTCTCGAATACCAGCTGAGGTAGAATTAAAAGGCTTGTCTGCGCCGGT
GACAATGGATTTGGAACTGATCAAGAAAGAAATGCATCAGGATCCCAAATTCCAGAAGTTAATGGCAGAATTGAGAGAGTTGGAAGATCGGCAGGGCAGTAAATATTCAC
TCCAGAATGATGTTCTGAAGTATAAGGATGGGTTGGTGATCACCAAAACTTCCTCATTAATTCCCACAATTTTAGATACCTACCATAATTTTGTTGTTGGAGGGCACTTC
GGGTTTTTACGAACCTACAAGAGGGTATCTAGTGACTTATATTGGGAAGGAATGAAGGTAGATATTAAGAAGCATTGTGAGGAATGTTTGATATGCCAAAGAAACAAATT
GCTAGCTTTGTCCCCTGCTGGATTATTAGTACCCTTGGAGATTCCGCAAGCCATTTGGAATGATATATCTATGGACTTTGTGGAAGGCCTACCAAAGGCTAATGGGTTTG
AAGTCATTTTGGTAGTGGTGGATAGATTGAGCAAGTACGGTCATTTCCTGCCTCTTAAACACCCCTTTACCGCAAAAGTGGTGGCCAAATTGTTTGTAAGGGAAGTTGTG
AGGTTGCACGGGTTTCCCTTATCCATTGTATCAGATAGGGATAAAAAAATTTTGAGTCATTTTTGGCAGGAATTGTTTAGATTATCTGGAACCAAGTTAAACAAGAGTAC
AGCTTACCACCCTCAGACCGATGGGCAGACAGAGGTAGTCAACAGGGGAGTTGAAACCTATCTCAGGTGTTTTTGCAATGAAAAGCCAAAGGAGTGGGTAAAATGGCTTC
CTTGGACCAAGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACATATGACAAAAGTGTTGTCCGTACTAAAAGAACATGAGTTGTACGCAAACAAGAAGAAATGCAGTTTTGCTCAGCAAAAGGTGGAATATTTAGGCCATATTAT
ATCCGGAGAAGGGGTTGAAGTGGACCCGGAGAAGATCAAGTCAATTACTAAGTGGCCAAAACGTACGAACATCAAAGAAGTTAGAGGTTTTTTGGGGCTCACAGGATATT
ATCGACGTTTCGTACAGAACTATGGAGCTATTGCAGCACCATTGACTCAGTTGTTGAAAAAGGGGGGATATAAATGGTCTGATGAAGCTGAGGATGCATTTGAACGGCTA
AAAAAAGCAATGTCATCTCTTCCAGTGTTGGCACTACCAAACTTTAATCAGCCTTTTGAAATAGAAACCGATGCTTCAGGCTATGGTGTTGGAGCAGTGCTAATTCAGGC
GAAGAGACCAATTGCATACTATAGTCATACGTTAGCCTTGAGGGATAGAGCCCGGCCTGTGTACGAGAGGGAATTAGTGGCTGTGATATTAGCCATCCAACGCTGGAGAC
CCTACTTATTGAGAGGAAAATTCAAGGTGAAAACTGATCAGAAGTCGCTGAAGTTTTTATTGGAACAGAGGGTTATCCAACCTCAATACAAAAACTGGATAGCAAAACTT
TTGGGGTACTCCTTTGAAGTAGTGTACAAGCCAGGTGCTGAAAATCGGGCTGCAGATGCCCTTTCTCGAATACCAGCTGAGGTAGAATTAAAAGGCTTGTCTGCGCCGGT
GACAATGGATTTGGAACTGATCAAGAAAGAAATGCATCAGGATCCCAAATTCCAGAAGTTAATGGCAGAATTGAGAGAGTTGGAAGATCGGCAGGGCAGTAAATATTCAC
TCCAGAATGATGTTCTGAAGTATAAGGATGGGTTGGTGATCACCAAAACTTCCTCATTAATTCCCACAATTTTAGATACCTACCATAATTTTGTTGTTGGAGGGCACTTC
GGGTTTTTACGAACCTACAAGAGGGTATCTAGTGACTTATATTGGGAAGGAATGAAGGTAGATATTAAGAAGCATTGTGAGGAATGTTTGATATGCCAAAGAAACAAATT
GCTAGCTTTGTCCCCTGCTGGATTATTAGTACCCTTGGAGATTCCGCAAGCCATTTGGAATGATATATCTATGGACTTTGTGGAAGGCCTACCAAAGGCTAATGGGTTTG
AAGTCATTTTGGTAGTGGTGGATAGATTGAGCAAGTACGGTCATTTCCTGCCTCTTAAACACCCCTTTACCGCAAAAGTGGTGGCCAAATTGTTTGTAAGGGAAGTTGTG
AGGTTGCACGGGTTTCCCTTATCCATTGTATCAGATAGGGATAAAAAAATTTTGAGTCATTTTTGGCAGGAATTGTTTAGATTATCTGGAACCAAGTTAAACAAGAGTAC
AGCTTACCACCCTCAGACCGATGGGCAGACAGAGGTAGTCAACAGGGGAGTTGAAACCTATCTCAGGTGTTTTTGCAATGAAAAGCCAAAGGAGTGGGTAAAATGGCTTC
CTTGGACCAAGTACTAG
Protein sequenceShow/hide protein sequence
MEHMTKVLSVLKEHELYANKKKCSFAQQKVEYLGHIISGEGVEVDPEKIKSITKWPKRTNIKEVRGFLGLTGYYRRFVQNYGAIAAPLTQLLKKGGYKWSDEAEDAFERL
KKAMSSLPVLALPNFNQPFEIETDASGYGVGAVLIQAKRPIAYYSHTLALRDRARPVYERELVAVILAIQRWRPYLLRGKFKVKTDQKSLKFLLEQRVIQPQYKNWIAKL
LGYSFEVVYKPGAENRAADALSRIPAEVELKGLSAPVTMDLELIKKEMHQDPKFQKLMAELRELEDRQGSKYSLQNDVLKYKDGLVITKTSSLIPTILDTYHNFVVGGHF
GFLRTYKRVSSDLYWEGMKVDIKKHCEECLICQRNKLLALSPAGLLVPLEIPQAIWNDISMDFVEGLPKANGFEVILVVVDRLSKYGHFLPLKHPFTAKVVAKLFVREVV
RLHGFPLSIVSDRDKKILSHFWQELFRLSGTKLNKSTAYHPQTDGQTEVVNRGVETYLRCFCNEKPKEWVKWLPWTKY