| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033349.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.4e-51 | 83.85 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+Q Y+KFNDTITSFGFKENIVDRCIYLKISGSKFI+LVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LAT D L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| KAA0052755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-53 | 86.15 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+QWY+KFNDTITSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LATND L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| RYE20331.1 hypothetical protein EOP45_11235, partial [Sphingobacteriaceae bacterium] | 3.9e-52 | 82.54 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MA+VAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGF+V+GKEHMVCKLK+SIYGLKQAS+QWY+KFNDT+TSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATNDLVCYVKLKNFFIKTLK
VDDI+LATNDL + K F K +
Subjt: VDDIMLATNDLVCYVKLKNFFIKTLK
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| TYK00088.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.8e-52 | 83.85 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAF+NGNLDE++FMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+QWY+KFNDTITSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LATND L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| TYK04201.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.6e-53 | 86.15 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+QWY+KFNDTITSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LATND L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A4V1T029 Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) | 1.9e-52 | 82.54 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MA+VAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGF+V+GKEHMVCKLK+SIYGLKQAS+QWY+KFNDT+TSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATNDLVCYVKLKNFFIKTLK
VDDI+LATNDL + K F K +
Subjt: VDDIMLATNDLVCYVKLKNFFIKTLK
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| A0A5A7SVZ5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.6e-51 | 83.85 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+Q Y+KFNDTITSFGFKENIVDRCIYLKISGSKFI+LVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LAT D L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| A0A5A7UG95 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.7e-54 | 86.15 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+QWY+KFNDTITSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LATND L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| A0A5D3BLU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.5e-53 | 83.85 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAF+NGNLDE++FMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+QWY+KFNDTITSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LATND L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| A0A5D3BWW5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.7e-54 | 86.15 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
MALVAHY+LELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS+QWY+KFNDTITSFGFKENIVDRCIYLKISGSKFIILVL+
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLH
Query: VDDIMLATND--LVCYVK---LKNFFIKTL
VDDI+LATND L+C K KNF +K +
Subjt: VDDIMLATND--LVCYVK---LKNFFIKTL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-21 | 41.41 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISG--SKFIILV
++LV YNL++HQMDVKTAFLNG L EE++M P+G + VCKL ++IYGLKQA++ W+ F + F + VDRCIY+ G ++ I ++
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISG--SKFIILV
Query: LHVDDIMLATNDLVCYVKLKNFFIKTLK
L+VDD+++AT D+ K + ++ +
Subjt: LHVDDIMLATNDLVCYVKLKNFFIKTLK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-28 | 49.6 | Show/hide |
Query: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLK-ISGSKFIILVL
++L A +LE+ Q+DVKTAFL+G+L+EE++M+QPEGF V GK+HMVCKL +S+YGLKQA +QWY+KF+ + S + + D C+Y K S + FIIL+L
Subjt: MALVAHYNLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLK-ISGSKFIILVL
Query: HVDDIMLATNDLVCYVKLKNFFIKT
+VDD+++ D KLK K+
Subjt: HVDDIMLATNDLVCYVKLKNFFIKT
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| P25600 Putative transposon Ty5-1 protein YCL074W | 7.8e-11 | 33.64 | Show/hide |
Query: MDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLHVDDIMLATNDLVC
MDV TAFLN +DE +++ QP GF+ E V +L +YGLKQA W N+T+ GF + + +Y + + I + ++VDD+++A
Subjt: MDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLHVDDIMLATNDLVC
Query: YVKLKNFFIK
Y ++K K
Subjt: YVKLKNFFIK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.6e-18 | 36 | Show/hide |
Query: LHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLHVDDIMLATND
+ Q+DV AFL G L ++V+M QP GF+ + + + VCKL++++YGLKQA + WY++ + + + GF ++ D +++ G + ++++VDDI++ ND
Subjt: LHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLHVDDIMLATND
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-17 | 39.22 | Show/hide |
Query: LHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLHVDDIMLATND
+ Q+DV AFL G L +EV+M QP GF+ + + VC+L+++IYGLKQA + WY++ + + GF +I D +++ G I ++++VDDI++ ND
Subjt: LHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASKQWYIKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLHVDDIMLATND
Query: LV
V
Subjt: LV
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