| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-88 | 89.78 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNNNTYLWHLRLGHINL+RIGRLVKN L N+L+D SLPPCESCLEGKMTKRPFT KGYRAKEPL LIH +L G MNVK R GFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 4.7e-86 | 87.63 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNNNTYLWHLRLGHINL+RIGRLVK+ L N+L+D SLPPCESCLEGKMTKRPFT KGYRAKEPL LIH +L G MNVK R FEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKI +SDRGGEYMDL FQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-86 | 88.17 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRIS NNNTYLWHLRLGHINL+RIGRLVKN L N+LED SLPPCESCLEGKMTKRPFT KGYRAKEPL LIH +L G MNVK GFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYS YGYLYL+EHKSEALEKFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| KAA0065386.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-86 | 87.63 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNN TYLWHLRLGHINL++IGRLVKN L N+LED SLPPCES LEGKMTKRPF KGYRAKEPL LIH +L G MNVK REGFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHKSEALEK KEY+ EVENLLS+KIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSALGTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| KAA0067938.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-86 | 88.17 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNNNTYLWHLRL HINL+RIGRLVKN L N+L+D SLPPCESCLEGKMTKRPFT K YRAKEPL LIH +L G MNVK R GFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHK EALEKFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7T2V9 Gag/pol protein | 2.3e-86 | 87.63 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNNNTYLWHLRLGHINL+RIGRLVK+ L N+L+D SLPPCESCLEGKMTKRPFT KGYRAKEPL LIH +L G MNVK R FEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKI +SDRGGEYMDL FQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| A0A5A7TZD0 Gag/pol protein | 4.9e-89 | 89.78 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNNNTYLWHLRLGHINL+RIGRLVKN L N+L+D SLPPCESCLEGKMTKRPFT KGYRAKEPL LIH +L G MNVK R GFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHKSEALEKFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| A0A5A7VGC7 Gag/pol protein | 1.7e-86 | 87.63 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNN TYLWHLRLGHINL++IGRLVKN L N+LED SLPPCES LEGKMTKRPF KGYRAKEPL LIH +L G MNVK REGFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHKSEALEK KEY+ EVENLLS+KIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSALGTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| A0A5A7VJG3 Gag/pol protein | 6.0e-87 | 88.17 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRISPNNNTYLWHLRL HINL+RIGRLVKN L N+L+D SLPPCESCLEGKMTKRPFT K YRAKEPL LIH +L G MNVK R GFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYSRYGYLYLMEHK EALEKFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| A0A5D3BNE1 Gag/pol protein | 1.0e-86 | 88.17 | Show/hide |
Query: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
MF+TANTQNKRQRIS NNNTYLWHLRLGHINL+RIGRLVKN L N+LED SLPPCESCLEGKMTKRPFT KGYRAKEPL LIH +L G MNVK GFEY
Subjt: MFKTANTQNKRQRISPNNNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEY
Query: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
FISFIDDYS YGYLYL+EHKSEALEKFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERR
Subjt: FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.5e-21 | 32.58 | Show/hide |
Query: NNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSL--------PPCESCLEGKMTKRPF--TRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDD
NN LWH R GHI+ G+L++ + N D SL CE CL GK + PF + K PL ++H ++ G + + YF+ F+D
Subjt: NNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSL--------PPCESCLEGKMTKRPF--TRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDD
Query: YSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSER
++ Y YL+++KS+ F+++ A+ E + K+ L D G EY+ + + ++ GI + L+ TPQ NGVSER
Subjt: YSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSER
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-26 | 35.98 | Show/hide |
Query: LWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDDYSRYGYLYLMEHKS
LWH R+GH++ + L K L + + ++ PC+ CL GK + F R L L++ ++ G M ++ G +YF++FIDD SR ++Y+++ K
Subjt: LWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSER
+ + F+++ A VE +K+K L+SD GGEY F++Y HGI+ + + GTPQ NGV+ER
Subjt: EALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSER
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 1.6e-04 | 33.33 | Show/hide |
Query: NNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNV
+ T LWH RL H++ + LVK + + SL CE C+ GK + F+ + K PL +H +L G +V
Subjt: NNTYLWHLRLGHINLNRIGRLVKNELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.7e-18 | 31.52 | Show/hide |
Query: WHLRLGHINLNRIGRLVKNELPNELE-DHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDDYSRYGYLYLMEHKS
WH RLGH + + ++ N + L H C CL K K PF++ + PL I+ ++ + + + Y++ F+D ++RY +LY ++ KS
Subjt: WHLRLGHINLNRIGRLVKNELPNELE-DHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
+ E F +K +EN +I SD GGE++ L +Y +HGI S TP+ NG+SER+
Subjt: EALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.2e-21 | 34.55 | Show/hide |
Query: WHLRLGHINLNRIGRLVKN-ELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDDYSRYGYLYLMEHKS
WH RLGH +L + ++ N LP H L C C K K PF+ + +PL I+ ++ + + + + Y++ F+D ++RY +LY ++ KS
Subjt: WHLRLGHINLNRIGRLVKN-ELPNELEDHSLPPCESCLEGKMTKRPFTRKGYRAKEPLGLIHPNLSGMMNVKVREGFEYFISFIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
+ + F +K+ VEN +I L SD GGE++ LR DY+ +HGI S TP+ NG+SER+
Subjt: EALEKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIEHGIQFQLSALGTPQQNGVSERR
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