| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025466.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| TYK26360.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SI12 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| A0A5D3DT06 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-88 | 89.73 | Show/hide |
Query: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
GQ IGTGRKVGRLFELLSLQV PS SI A VTDS+TYQW LRLGHASP+KLRHLISINNLNS+TKF+PFNC NCKLAKQPALSFSTSTSICDKPFDLIHS
Subjt: GQMIGTGRKVGRLFELLSLQVPPSSSIFASVTDSNTYQWRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHS
Query: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
+IWGPAPTS VHGYRYYVLFIDDFSRFTWIYFLKH ELSRTYIEFANMI TQ S PIKTLR DNALEYKDSTLLSFLSQQGTLV
Subjt: NIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQGTLV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.6e-07 | 25.32 | Show/hide |
Query: SNTYQWRLRLGHASPKKL-----RHLIS----INNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFIDDF
+N W R GH S KL +++ S +NNL ++ I C N K A+ P T I +P ++HS++ GP + Y+V+F+D F
Subjt: SNTYQWRLRLGHASPKKL-----RHLIS----INNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFIDDF
Query: SRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
+ + Y +K+ ++ + +F + + L DN EY + + F ++G
Subjt: SRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-14 | 30.56 | Show/hide |
Query: WRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYE
W R+GH S K L+ L + ++ C C KQ +SF TS+ DL++S++ GP ++ G +Y+V FIDD SR W+Y LK +
Subjt: WRLRLGHASPKKLRHLISINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFIDDFSRFTWIYFLKHHYE
Query: LSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
+ + + +F ++ + +K LR+DN EY + S G
Subjt: LSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
|
|
| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 4.2e-05 | 23.72 | Show/hide |
Query: LGHASPKKLRHLISINNLNSVTKF----------IPFNCFNCKLAKQPALSFSTSTSI----CDKPFDLIHSNIWGPAPTSAVHGYRYYVLFIDDFSRFT
L HA+ + +R+ S+ N N++T F I + C +C + K + + +PF +H++I+GP Y++ F D+ ++F
Subjt: LGHASPKKLRHLISINNLNSVTKF----------IPFNCFNCKLAKQPALSFSTSTSI----CDKPFDLIHSNIWGPAPTSAVHGYRYYVLFIDDFSRFT
Query: WIYFLKHHYE--LSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
W+Y L E + + I Q + ++ D EY + TL FL + G
Subjt: WIYFLKHHYE--LSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.9e-20 | 35.4 | Show/hide |
Query: SIFASVTDSNTY-QWRLRLGHASPKKLRHLI---SINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFI
S+FAS + T+ W RLGH +P L +I S++ LN KF+ +C +C + K + FS ST +P + I+S++W +P + YRYYV+F+
Subjt: SIFASVTDSNTY-QWRLRLGHASPKKLRHLI---SINNLNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFI
Query: DDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
D F+R+TW+Y LK ++ T+I F N++ + I T +DN E+ L + SQ G
Subjt: DDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.1e-19 | 36.02 | Show/hide |
Query: SIFASVTDSNTY-QWRLRLGHASPKKLRHLISINN---LNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFI
S+FAS T+ W RLGH S L +IS ++ LN K + +C +C + K + FS ST KP + I+S++W +P ++ YRYYV+F+
Subjt: SIFASVTDSNTY-QWRLRLGHASPKKLRHLISINN---LNSVTKFIPFNCFNCKLAKQPALSFSTSTSICDKPFDLIHSNIWGPAPTSAVHGYRYYVLFI
Query: DDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
D F+R+TW+Y LK ++ T+I F +++ + I TL +DN E+ L +LSQ G
Subjt: DDFSRFTWIYFLKHHYELSRTYIEFANMIHTQISYPIKTLRADNALEYKDSTLLSFLSQQG
|
|
