CuGenDBv2

Gene ID	Cmc06g0167351
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	CMiso1.1chr06:20552351..20552623
RNA-Seq Expression	Cmc06g0167351
Synteny	Cmc06g0167351
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0048038 - quinone binding (molecular function) GO:0050136 - NADH dehydrogenase (quinone) activity (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR001135 - NADH-quinone oxidoreductase, subunit D IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK19320.1 NADH dehydrogenase subunit 7 [Cucumis melo var. makuwa]

1.1e-37

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

YP_004841841.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. melo]

1.1e-37

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

YP_009326046.1 NADH dehydrogenase subunit 7 [Citrullus lanatus]

1.3e-36

84.44

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVD YECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDR RSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

YP_009420851.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis]

1.3e-36

84.44

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVD YECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDR RSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

YP_009752038.1 NADH dehydrogenase subunit H [Cionosicys macranthus]

7.4e-37

84.44

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVD YECYDEFDWEVQWQKE +SLA YLVRL +MTES+K+IQQALEGI GG YENLEIRSFDR RSPKWNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU61 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.5e-38

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

A0A1X9Q1R4 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.5e-38

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

A0A218KGA7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.5e-38

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

A0A249RZD9 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.5e-38

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

G3ETV5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.5e-38

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

SwissProt top hits

e value

%identity

Alignment

A0ZZ91 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.7e-36

76.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S I WDLRKVD YECYDEFDWE+QWQKE +SLA YLVR+ +MTES+K+IQQALEGI GG YENLEIR FDR R P+WNDF+YRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

A6MMH1 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.7e-36

77.78

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S I WDLRKVD YECYDEFDWEVQWQKE +SLA YLVR+ +MTES+K+IQQALEGI GG YENLE+R FDRAR  +WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.0e-36

77.78

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S I WDLRKVD YECYDEFDWEVQWQKE +SLA YLVR+ +MTES+K+IQQALEGI GG YENLEIR FDR + P+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.9e-37

78.89

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S I WDLRKVD YECYDEFDWEVQWQKE +SLA YLVR+ +MTES+K+IQQALEGI GG YENLEIR FDR R+P+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.5e-40

86.67

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRKVDRYECYDEFDWEVQWQKE +SLA YLVRL +MTESVK+IQQALEGI GG YENLEIRSFDRARSP+WNDFDYRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

1.3e-36

73.33

Show/hide

Query:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN
        MLR S IPWDLRK+DRYE YDEF+WE+QWQK+ +SLA YLVRL +MTES+K+IQQALEG+ GG YENLE R FDR R+P+WNDF+YRFI+
Subjt:  MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGCGAGTTTCTAGAATACCATGGGATCTTCGTAAAGTTGATCGTTATGAGTGTTATGACGAATTTGATTGGGAAGTTCAGTGGCAAAAAGAATGCAATTCATTAGC
TTGTTATTTAGTCAGACTTCCTAAGATGACGGAATCCGTAAAAATGATTCAACAAGCTTTGGAAGGAATTCTAGGGGGAACTTATGAAAATTTAGAAATACGATCTTTTG
ATCGAGCAAGGTCTCCGAAATGGAATGACTTTGACTATCGATTCATTAATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLRVSRIPWDLRKVDRYECYDEFDWEVQWQKECNSLACYLVRLPKMTESVKMIQQALEGILGGTYENLEIRSFDRARSPKWNDFDYRFIN

Cmc06g0167351 (gene) of Melon (Charmono) v1.1 genome