| GenBank top hits | e value | %identity | Alignment |
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| RVW26456.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-74 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| RVW50867.1 Copia protein [Vitis vinifera] | 1.4e-74 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| RVW59049.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-74 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| RVW89885.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-74 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| RVX16158.1 Copia protein [Vitis vinifera] | 1.4e-74 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CTC8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-75 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| A0A438ET65 Copia protein | 7.0e-75 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| A0A438ETU3 Copia protein | 7.0e-75 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| A0A438HZK0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-75 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| A0A438K4P3 Copia protein | 7.0e-75 | 72.49 | Show/hide |
Query: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
W+R N+ +++IFA+ VA +II +ED EP++V++CR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQ
Subjt: WNRINVAVDDIFAYNVAHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQ
Query: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
GFSQRPGI YEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IY KIPE FK+ ++ N+ R + SIKLQRSLYGLK
Subjt: GFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.9e-25 | 39.31 | Show/hide |
Query: AHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSP
AH I ++ P S D+ + R D W+EAI ELN+ + + P+ V +WVF K NE RYKARLVA+GF+Q+ I YEET++P
Subjt: AHNIIHENEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSP
Query: VVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
V + R+++SL + NL +H MDV TA+L G+L+ EIY ++P + + NS +C KL +++YGLK
Subjt: VVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-25 | 39.16 | Show/hide |
Query: NEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITL
++D EP+S+ + + + + +A+Q E+ SL K + +V PKG +P+ KWVF K++ + ++ RYKARLV +GF Q+ GI ++E +SPVV ++
Subjt: NEDYEPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITL
Query: RYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
R ++SLA +L++ +DV TA+L+G LE EIY + PE F++ +C KL +SLYGLK
Subjt: RYLISLAVCENLDMHLMDVVTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-11 | 42.72 | Show/hide |
Query: EPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITLRYLI
EPKSV KD P W +A+Q EL++L++ + + +V P +G KWVF K + + + R KARLVA+GF Q GI + ETYSPVV T+R ++
Subjt: EPKSVDKCRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITLRYLI
Query: SLA
++A
Subjt: SLA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-21 | 35.37 | Show/hide |
Query: KWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
+W+ A+ +E+N+ + V P V VG +W+F K N + + RYKARLVA+G++QRPG+ Y ET+SPV+ + ++R ++ +AV + + +DV
Subjt: KWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
Query: VTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
A+L G+L +++Y P F R KL+++LYGLK
Subjt: VTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.3e-21 | 34.69 | Show/hide |
Query: KWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
+W++A+ +E+N+ + V P V VG +W+F K N + + RYKARLVA+G++QRPG+ Y ET+SPV+ + ++R ++ +AV + + +DV
Subjt: KWKEAIQAELNSLTKREVFGPVVYTPKGVKPVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIGYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
Query: VTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
A+L G+L +E+Y P F R +L++++YGLK
Subjt: VTAYLYGSLENEIYRKIPEEFKILESYNSNSRELCSIKLQRSLYGLK
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