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Cmc06g0167571 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0167571
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE2
Genome locationCMiso1.1chr06:20774177..20774434
RNA-Seq ExpressionCmc06g0167571
SyntenyCmc06g0167571
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045109.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.9e-3588.24Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL LR STNLS VGF D DWASDPDDRKS SGYCVYFGNNLVSWGSKKQS IFRSSTEAE
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

KAA0046194.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.8e-3283.53Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL L+ STNLS VGFVD DWASDPDD KS SGYCVYFGN LVSWGSKKQS I +SSTEAE
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

KAA0057506.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-3283.53Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL LR STNLS VGF + DWASDPDDRKSI GYCVYFGNNLVSWGSKKQS I RSST+ E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

XP_016902929.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]5.7e-3181.18Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKLT WQLVK ILRYLKG LSHGL L+HS NLS VGFVDVDWASD  DRKS SG+CVYF NNLVSWGSKKQS IFRSS   E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

XP_016903342.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.3e-3283.53Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL LR STNLS VGF + DWASDPDDRKSI GYCVYFGNNLVSWGSKKQS I RSST+ E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

TrEMBL top hitse value%identityAlignment
A0A1S4E543 uncharacterized mitochondrial protein AtMg00810-like1.1e-3283.53Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL LR STNLS VGF + DWASDPDDRKSI GYCVYFGNNLVSWGSKKQS I RSST+ E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

A0A5A7TT17 Putative mitochondrial protein8.6e-3383.53Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL L+ STNLS VGFVD DWASDPDD KS SGYCVYFGN LVSWGSKKQS I +SSTEAE
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

A0A5A7UTP6 Putative mitochondrial protein1.1e-3283.53Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL LR STNLS VGF + DWASDPDDRKSI GYCVYFGNNLVSWGSKKQS I RSST+ E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

A0A5A7VLX3 Putative mitochondrial protein2.8e-3181.18Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKLT WQLVK ILRYLKG LSHGL L+HS NLS VGFVDVDWASD  DRKS SG+CVYF NNLVSWGSKKQS IFRSS   E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

A0A5D3DK36 Putative mitochondrial protein1.4e-3588.24Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MHSPKL  WQLVKRILRYLKG+LSHGL LR STNLS VGF D DWASDPDDRKS SGYCVYFGNNLVSWGSKKQS IFRSSTEAE
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.8e-1247.56Show/hide
Query:  WQLVKRILRYLKGTLSHGLCLRHSTNLSF----VGFVDVDWASDPDDRKSISGYCV-YFGNNLVSWGSKKQSFIFRSSTEAE
        WQ +KR+LRYLKGT+   L  +   NL+F    +G+VD DWA    DRKS +GY    F  NL+ W +K+Q+ +  SSTEAE
Subjt:  WQLVKRILRYLKGTLSHGLCLRHSTNLSF----VGFVDVDWASDPDDRKSISGYCV-YFGNNLVSWGSKKQSFIFRSSTEAE

P0CV72 Secreted RxLR effector protein 1611.5e-1345.12Show/hide
Query:  PKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        P  T WQ +KR+LRYL+ T ++GL    +     VG+ D DWA D + R+S SGY        VSW SKKQ  +  SSTE E
Subjt:  PKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

P92519 Uncharacterized mitochondrial protein AtMg008109.8e-1844.71Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MH P L  + L+KR+LRY+KGT+ HGL +  ++ L+   F D DWA     R+S +G+C + G N++SW +K+Q  + RSSTE E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.6e-1851.76Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MH P     Q +KRILRYL GT +HG+ L+    LS   + D DWA D DD  S +GY VY G++ +SW SKKQ  + RSSTEAE
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.8e-1950.59Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MH P    W  +KR+LRYL GT  HG+ L+    LS   + D DWA D DD  S +GY VY G++ +SW SKKQ  + RSSTEAE
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.0e-1440.96Show/hide
Query:  SPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        +P+L   Q V +IL Y+KGT+  GL       +    F D  + S  D R+S +GYC++ G +L+SW SKKQ  + +SS EAE
Subjt:  SPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.3e-0840Show/hide
Query:  KLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYC
        +  + Q V ++L Y+KGT+  GL    +++L    F D DWAS PD R+S++G+C
Subjt:  KLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein7.0e-1944.71Show/hide
Query:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE
        MH P L  + L+KR+LRY+KGT+ HGL +  ++ L+   F D DWA     R+S +G+C + G N++SW +K+Q  + RSSTE E
Subjt:  MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCTCCTAAACTTACACGTTGGCAACTTGTAAAACGCATTTTGAGATATCTAAAAGGTACCTTATCTCATGGATTGTGTCTTAGACATTCTACCAATTTATCATT
TGTTGGTTTTGTTGATGTTGATTGGGCATCTGATCCTGATGATAGGAAGTCCATTTCTGGTTATTGTGTTTACTTTGGTAATAATTTAGTCTCTTGGGGATCAAAGAAAC
AATCCTTTATTTTTAGATCTAGTACTGAAGCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTCTCCTAAACTTACACGTTGGCAACTTGTAAAACGCATTTTGAGATATCTAAAAGGTACCTTATCTCATGGATTGTGTCTTAGACATTCTACCAATTTATCATT
TGTTGGTTTTGTTGATGTTGATTGGGCATCTGATCCTGATGATAGGAAGTCCATTTCTGGTTATTGTGTTTACTTTGGTAATAATTTAGTCTCTTGGGGATCAAAGAAAC
AATCCTTTATTTTTAGATCTAGTACTGAAGCAGAATAG
Protein sequenceShow/hide protein sequence
MHSPKLTRWQLVKRILRYLKGTLSHGLCLRHSTNLSFVGFVDVDWASDPDDRKSISGYCVYFGNNLVSWGSKKQSFIFRSSTEAE