; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0167731 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0167731
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:21049954..21051042
RNA-Seq ExpressionCmc06g0167731
SyntenyCmc06g0167731
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR021109 - Aspartic peptidase domain superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-19796.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-19796.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-19796.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-19796.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]1.6e-19997.5Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITEAEAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPK+IVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQKKKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase5.6e-19896.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

A0A5D3B7E7 Reverse transcriptase5.6e-19896.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

A0A5D3BRZ6 Reverse transcriptase5.6e-19896.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

A0A5D3C4R1 Reverse transcriptase5.6e-19896.39Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITE EAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENSGETVPK+I+RVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQ+KKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

A0A5D3C9P8 Reverse transcriptase7.8e-20097.5Show/hide
Query:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV
        MVDSGAT NFITEAEAK LNL WEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPM LAKCLVITGPTPSV
Subjt:  MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPK+IVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAP+LFQKKKDGSLRLCID RALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF
        GAFEF VMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQK F
Subjt:  GAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFF

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.4e-3434.13Show/hide
Query:  VLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLT
        + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    P++F  KK+G+LR+ +D + LNK  
Subjt:  VLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLT

Query:  VRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM
          N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+ VMP+G++ APA F   +N +  E  +  VV Y+DDI+++S + 
Subjt:  VRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM

Query:  EEHRDHLQ
         EH  H++
Subjt:  EEHRDHLQ

P0CT41 Transposon Tf2-12 polyprotein8.4e-3434.13Show/hide
Query:  VLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLT
        + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    P++F  KK+G+LR+ +D + LNK  
Subjt:  VLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLT

Query:  VRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM
          N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+ VMP+G++ APA F   +N +  E  +  VV Y+DDI+++S + 
Subjt:  VRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTM

Query:  EEHRDHLQ
         EH  H++
Subjt:  EEHRDHLQ

P31843 RNA-directed DNA polymerase homolog8.7e-4771.43Show/hide
Query:  SLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKF
        SLR+CID RAL K+T++NKYP+P + DLFDRL  A +F+KLDLRSGY+QVRIA+GDEPKTTCVTRYG+FEF VMPFGLTNA ATFC LMN V +EYLD F
Subjt:  SLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCTLMNQVFHEYLDKF

Query:  VVVYLDDIVV---YSTTMEEHRDHLQ
        VVVYLDD+VV   YS ++ EH  HL+
Subjt:  VVVYLDDIVV---YSTTMEEHRDHLQ

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.4e-4138.72Show/hide
Query:  TFMAIPLNSSENSG-ETVPKKIVRVLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP
        T  ++  N++++S  +T     V + +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y +      E+ K + +LL+  FI P+K+P
Subjt:  TFMAIPLNSSENSG-ETVPKKIVRVLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP

Query:  YGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCT
          +P++   KKDG+ RLC+D R LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF  
Subjt:  YGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCT

Query:  LMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
         M   F +   +FV VYLDDI+++S + EEH  HL
Subjt:  LMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.4e-4138.72Show/hide
Query:  TFMAIPLNSSENSG-ETVPKKIVRVLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP
        T  ++  N++++S  +T     V + +KYR+++ + LP       ++P    + H+IE+ PGA+ P    Y +      E+ K + +LL+  FI P+K+P
Subjt:  TFMAIPLNSSENSG-ETVPKKIVRVLEKYRDVMPDSLP------KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAP

Query:  YGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCT
          +P++   KKDG+ RLC+D R LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF  
Subjt:  YGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNAPATFCT

Query:  LMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
         M   F +   +FV VYLDDI+++S + EEH  HL
Subjt:  LMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACTCCGGTGCCACCCAAAATTTCATAACAGAAGCCGAAGCTAAACATCTGAATCTCTGCTGGGAGAAAGATGCAGGAAGAATGAAAGCTGTGAATTCT
GCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTAGGAGGATGGAGTGGCCTAGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTG
GTACTGGGAATGGAGTTCCTACTCGAACATCAGGTAATCCCAATGTCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTA
CGTCAGCCAGATGGGCTAAAAATGATCTCCGCCATGCAATTAAAGAAAGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCGTCAGAGAAC
TCAGGGGAGACAGTCCCTAAAAAGATCGTGCGCGTACTAGAGAAATACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTACCACCTCGGAGAATGATTGAT
CATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTG
AATGCAGGGTTCATTAGGCCTGCAAAAGCTCCGTATGGGGCCCCGATTCTCTTTCAGAAGAAGAAAGATGGGAGTTTACGATTATGCATTGATTGTCGTGCCCTG
AATAAACTCACGGTCCGCAACAAGTATCCTCTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAATATTTTTCAAAGTTAGACTTGCGGTCGGGG
TACTACCAAGTAAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCTTCGTAATGCCATTTGGTCTCACCAATGCC
CCTGCCACCTTCTGTACGTTGATGAACCAGGTGTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAG
GAACATAGAGACCACCTACAAAAGTTTTTCATAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACTCCGGTGCCACCCAAAATTTCATAACAGAAGCCGAAGCTAAACATCTGAATCTCTGCTGGGAGAAAGATGCAGGAAGAATGAAAGCTGTGAATTCT
GCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTAGGAGGATGGAGTGGCCTAGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTG
GTACTGGGAATGGAGTTCCTACTCGAACATCAGGTAATCCCAATGTCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTA
CGTCAGCCAGATGGGCTAAAAATGATCTCCGCCATGCAATTAAAGAAAGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCGTCAGAGAAC
TCAGGGGAGACAGTCCCTAAAAAGATCGTGCGCGTACTAGAGAAATACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTACCACCTCGGAGAATGATTGAT
CATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTG
AATGCAGGGTTCATTAGGCCTGCAAAAGCTCCGTATGGGGCCCCGATTCTCTTTCAGAAGAAGAAAGATGGGAGTTTACGATTATGCATTGATTGTCGTGCCCTG
AATAAACTCACGGTCCGCAACAAGTATCCTCTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAATATTTTTCAAAGTTAGACTTGCGGTCGGGG
TACTACCAAGTAAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCTTCGTAATGCCATTTGGTCTCACCAATGCC
CCTGCCACCTTCTGTACGTTGATGAACCAGGTGTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAG
GAACATAGAGACCACCTACAAAAGTTTTTCATAAATTAA
Protein sequenceShow/hide protein sequence
MVDSGATQNFITEAEAKHLNLCWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMSLAKCLVITGPTPSVVQTDL
RQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKKIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELL
NAGFIRPAKAPYGAPILFQKKKDGSLRLCIDCRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFFVMPFGLTNA
PATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKFFIN