| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 7.9e-68 | 87.33 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MLK IRILLSI T YNYEIWQMDVKTAFLNGNLEESIYM+Q EGFI QEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
V+FLILY+DDILLIGNDV +LTD+KKWL TQFQMKDLG AQY+LGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-69 | 88.67 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+K IRILLSI T Y+YEIWQMDVKTAFLNGNLEESIYM+Q EGFIQ GQEQKVCKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYKRIINS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
TV+FL+LY+DDILLIGN+V HLTDIK+WL TQFQMKDLG+AQYVLGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| KAA0061927.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-65 | 82.67 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MLK IRILLSI T Y+YEIWQMDVKTAFLNGNLE S+YM Q +GFI+NGQEQKVCKLQKSIY LKQASRSWNI+FDT IK+YGFEQNV+EPCVYK+++NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
V+FL+LY+DDILLIGNDVG+LTDI+KWLATQFQMK LG+AQYVLGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-66 | 86 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+K IRILLSI T Y+YEIWQMDVKT FLN NLEESIYM+Q E FIQ GQEQK+CKLQKSIYGLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
TV+FL+LY+DDILLIGNDVGHL DIKKWLA QFQMKDLGNAQYVLG+QIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-67 | 84.67 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MLK IRILLSI T Y+YEIWQ+DVKTAFLNGNLEESIYM Q EGFI+ GQEQK+CK QKSIYGLKQASRSWNIRFDTAIKSYGFEQNVD+PCVYK+++NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
V+FL+LY+DDILL+GNDVG+LTDIKKWLATQFQMKD G+AQYVLGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 1.6e-69 | 88.67 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+K IRILLSI T Y+YEIWQMDVKTAFLNGNLEESIYM+Q EGFIQ GQEQKVCKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYKRIINS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
TV+FL+LY+DDILLIGN+V HLTDIK+WL TQFQMKDLG+AQYVLGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| A0A5A7V4T1 Gag/pol protein | 4.0e-65 | 82.67 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MLK IRILLSI T Y+YEIWQMDVKTAFLNGNLE S+YM Q +GFI+NGQEQKVCKLQKSIY LKQASRSWNI+FDT IK+YGFEQNV+EPCVYK+++NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
V+FL+LY+DDILLIGNDVG+LTDI+KWLATQFQMK LG+AQYVLGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| A0A5D3BX45 Gag/pol protein | 7.2e-67 | 86 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
M+K IRILLSI T Y+YEIWQMDVKT FLN NLEESIYM+Q E FIQ GQEQK+CKLQKSIYGLKQASRS NIRFDTAIKSYG EQNVDEPCVYKRI+NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
TV+FL+LY+DDILLIGNDVGHL DIKKWLA QFQMKDLGNAQYVLG+QIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| A0A5D3CDT9 Gag/pol protein | 1.1e-67 | 84.67 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MLK IRILLSI T Y+YEIWQ+DVKTAFLNGNLEESIYM Q EGFI+ GQEQK+CK QKSIYGLKQASRSWNIRFDTAIKSYGFEQNVD+PCVYK+++NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
V+FL+LY+DDILL+GNDVG+LTDIKKWLATQFQMKD G+AQYVLGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| E2GK51 Gag/pol protein (Fragment) | 3.8e-68 | 87.33 | Show/hide |
Query: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
MLK IRILLSI T YNYEIWQMDVKTAFLNGNLEESIYM+Q EGFI QEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYK+I+NS
Subjt: MLKLIRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINS
Query: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
V+FLILY+DDILLIGNDV +LTD+KKWL TQFQMKDLG AQY+LGIQIV
Subjt: TVSFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.3e-24 | 40.82 | Show/hide |
Query: RILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRIINSTV
R +LS+ YN ++ QMDVKTAFLNG L+E IYM +G N VCKL K+IYGLKQA+R W F+ A+K F + + C+Y K IN +
Subjt: RILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY---KRIINSTV
Query: SFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQI
+++LY+DD+++ D+ + + K++L +F+M DL ++ +GI+I
Subjt: SFLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-33 | 48.98 | Show/hide |
Query: IRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY-KRIINSTVS
IR +LS+ + E+ Q+DVKTAFL+G+LEE IYM Q EGF G++ VCKL KS+YGLKQA R W ++FD+ +KS + + +PCVY KR +
Subjt: IRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVY-KRIINSTVS
Query: FLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
L+LY+DD+L++G D G + +K L+ F MKDLG AQ +LG++IV
Subjt: FLILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIV
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.4e-14 | 34.38 | Show/hide |
Query: MDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVSFLILYLDDILLIGNDVGH
MDV TAFLN ++E IY+ Q GF+ V +L +YGLKQA WN + +K GF ++ E +Y R + ++ +Y+DD+L+
Subjt: MDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVSFLILYLDDILLIGNDVGH
Query: LTDIKKWLATQFQMKDLGNAQYVLGIQI
+K+ L + MKDLG LG+ I
Subjt: LTDIKKWLATQFQMKDLGNAQYVLGIQI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.4e-21 | 36.11 | Show/hide |
Query: IRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVSF
IRI+L + ++ I Q+DV AFL G L + +YM Q GFI + VCKL+K++YGLKQA R+W + + + GF +V + ++ ++ +
Subjt: IRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVSF
Query: LILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQ
+++Y+DDIL+ GND L + L+ +F +KD Y LGI+
Subjt: LILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.4e-21 | 34.72 | Show/hide |
Query: IRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVSF
IRI+L + ++ I Q+DV AFL G L + +YM Q GF+ + VC+L+K+IYGLKQA R+W + T + + GF ++ + ++ ++ +
Subjt: IRILLSITTLYNYEIWQMDVKTAFLNGNLEESIYMIQQEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKRIINSTVSF
Query: LILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQ
+++Y+DDIL+ GND L L+ +F +K+ + Y LGI+
Subjt: LILYLDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQ
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