CuGenDBv2

Gene ID	Cmc06g0168101
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Genome location	CMiso1.1chr06:21692197..21693907
RNA-Seq Expression	Cmc06g0168101
Synteny	Cmc06g0168101
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0010158 - abaxial cell fate specification (biological process) GO:0015074 - DNA integration (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ96663.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.6e-261

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.6e-261

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

TYK27058.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.6e-261

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

TYK27963.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.6e-261

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

TYK28944.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

1.6e-261

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BBH7 Ty3/gypsy retrotransposon protein

7.9e-262

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

A0A5D3DU86 Ty3/gypsy retrotransposon protein

7.9e-262

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

A0A5D3DWA9 Ty3/gypsy retrotransposon protein

7.9e-262

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

A0A5D3DZK6 Ty3/gypsy retrotransposon protein

7.9e-262

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

A0A5D3E325 Ty3/gypsy retrotransposon protein

7.9e-262

81.2

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM
        MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VM
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVM

Query:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------
        PFGLTNAPATFQSLMNQ+FKPFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK                                  
Subjt:  PFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK----------------------------------

Query:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ
                   + LTGYYRRFVKGYG+IAAPLTKLLQKN+FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Subjt:  -----------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ

Query:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS
        KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+
Subjt:  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTS

Query:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE
        GIVDME+VTKEVEKDEELQ L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYKRMSGEL+WKGMK DIK YVE
Subjt:  GIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVE

Query:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF
        QCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYF+T+KH F
Subjt:  QCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.4e-74

31.57

Show/hide

Query:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP
        L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP
Subjt:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP

Query:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------
        +G++ APA FQ  +N I        V+ +  DILI+S   +EH KH+  V   L++  L  N+ K                                   
Subjt:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------

Query:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI
                  +    Y R+F+     +  PL  LL+K+  +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Subjt:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI

Query:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS
         ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E      +  +W   L  ++FEI Y+PG  N  ADALSR+ + 
Subjt:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS

Query:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR
         E             +N +S +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L  +++  +H+     H     
Subjt:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR

Query:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI
            +     WKG++  I+ YV+ C  CQ NK    KP G LQP+P  ER  E  +MDFI  LP++ G N + VVVDR SK A  +
Subjt:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI

P0CT35 Transposon Tf2-2 polyprotein

2.4e-74

31.57

Show/hide

Query:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP
        L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP
Subjt:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP

Query:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------
        +G++ APA FQ  +N I        V+ +  DILI+S   +EH KH+  V   L++  L  N+ K                                   
Subjt:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------

Query:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI
                  +    Y R+F+     +  PL  LL+K+  +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Subjt:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI

Query:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS
         ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E      +  +W   L  ++FEI Y+PG  N  ADALSR+ + 
Subjt:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS

Query:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR
         E             +N +S +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L  +++  +H+     H     
Subjt:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR

Query:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI
            +     WKG++  I+ YV+ C  CQ NK    KP G LQP+P  ER  E  +MDFI  LP++ G N + VVVDR SK A  +
Subjt:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI

P0CT36 Transposon Tf2-3 polyprotein

2.4e-74

31.57

Show/hide

Query:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP
        L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP
Subjt:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP

Query:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------
        +G++ APA FQ  +N I        V+ +  DILI+S   +EH KH+  V   L++  L  N+ K                                   
Subjt:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------

Query:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI
                  +    Y R+F+     +  PL  LL+K+  +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Subjt:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI

Query:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS
         ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E      +  +W   L  ++FEI Y+PG  N  ADALSR+ + 
Subjt:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS

Query:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR
         E             +N +S +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L  +++  +H+     H     
Subjt:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR

Query:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI
            +     WKG++  I+ YV+ C  CQ NK    KP G LQP+P  ER  E  +MDFI  LP++ G N + VVVDR SK A  +
Subjt:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI

P0CT37 Transposon Tf2-4 polyprotein

2.4e-74

31.57

Show/hide

Query:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP
        L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP
Subjt:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP

Query:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------
        +G++ APA FQ  +N I        V+ +  DILI+S   +EH KH+  V   L++  L  N+ K                                   
Subjt:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------

Query:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI
                  +    Y R+F+     +  PL  LL+K+  +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Subjt:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI

Query:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS
         ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E      +  +W   L  ++FEI Y+PG  N  ADALSR+ + 
Subjt:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS

Query:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR
         E             +N +S +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L  +++  +H+     H     
Subjt:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR

Query:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI
            +     WKG++  I+ YV+ C  CQ NK    KP G LQP+P  ER  E  +MDFI  LP++ G N + VVVDR SK A  +
Subjt:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI

P0CT41 Transposon Tf2-12 polyprotein

2.4e-74

31.57

Show/hide

Query:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP
        L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP
Subjt:  LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMP

Query:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------
        +G++ APA FQ  +N I        V+ +  DILI+S   +EH KH+  V   L++  L  N+ K                                   
Subjt:  FGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-----------------------------------

Query:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI
                  +    Y R+F+     +  PL  LL+K+  +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Subjt:  ----------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-SFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI

Query:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS
         ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E      +  +W   L  ++FEI Y+PG  N  ADALSR+ + 
Subjt:  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENS

Query:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR
         E             +N +S +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L  +++  +H+     H     
Subjt:  PE-------------LNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLR

Query:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI
            +     WKG++  I+ YV+ C  CQ NK    KP G LQP+P  ER  E  +MDFI  LP++ G N + VVVDR SK A  +
Subjt:  TYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFI

Arabidopsis top hits

e value

%identity

Alignment

ATMG00850.1 DNA/RNA polymerases superfamily protein

2.9e-06

78.57

Show/hide

Query:  MLQTRIIRPSHSPFSSPVLLVKKKDGGW
        ML+ RII+PS SP+SSPVLLV+KKDGGW
Subjt:  MLQTRIIRPSHSPFSSPVLLVKKKDGGW

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.8e-17

40.77

Show/hide

Query:  HLGMVFAVLRDNQLYANRKK-----------------------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWD
        HLGMV  +   +Q YANRKK                                               + LTGYYRRFVK YG I  PLT+LL+KNS KW 
Subjt:  HLGMVFAVLRDNQLYANRKK-----------------------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWD

Query:  EEATLAFENLKLAMTTIPVPALPNWSLPFM
        E A LAF+ LK A+TT+PV ALP+  LPF+
Subjt:  EEATLAFENLKLAMTTIPVPALPNWSLPFM

Sequences

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CDS sequence

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ATGCTCCAGACAAGGATAATCAGACCCAGCCATAGCCCTTTCTCAAGTCCCGTGCTGCTGGTAAAGAAGAAAGATGGTGGATGGAGGTTTTGTGTGGATTACCGAAAATT
GAACAAAATCACAATAGCGGATAAATTCCCCATACCAGTGATTGAAGAATTACTAGATGAACTAAATCGGGCCACTGTTTTTTCAAAATTGGACCTAAAATCTGGTTATC
ACCTTATCAGAATGAAAGAAGAGAATATTGAGAAGATTGCGTTTCGAACACACGAGGGCCACTATGAATTCCTGGTCATGCCATTTGGACTGACGAATGCCCCGGCCACT
TTCCAGTCTCTCATGAACCAGATATTTAAACCCTTCCTCAGACGCTGTGTACTGGTTTTTTTTTATGATATACTCATTTACAGTTCAGACATAACTGAGCATGAGAAGCA
CTTAGGAATGGTGTTTGCAGTATTGAGGGATAACCAGTTGTATGCTAATAGAAAAAAAATGTGGCTGACTGGGTATTATAGACGTTTTGTCAAAGGTTATGGAGATATCG
CAGCCCCCTTGACCAAATTGTTGCAGAAAAACTCTTTTAAATGGGATGAAGAAGCCACTCTTGCTTTTGAGAATTTGAAACTGGCTATGACCACAATACCTGTGCCAGCA
CTTCCCAATTGGTCCCTGCCCTTCATGGTAGAAACTGATGCGTCAGGCAGCGGATTAGGAGCAGTACTATCACAGAACGGCCACCCCATCGCGTTCTTTAGCCAAAAGCT
ATCGCCAAGGGCCCAATCCAAATCGATCTACGAAAGAGAATTGATGGCAGTAGTGTTGTCAGTACAGAAATGGCGACATTATCTTTTGGGAAGAAAGTTCACCATGATGT
CGGATCAAAAAGCTTTGAAGTTTCTGCTGGAACAGAGAGAGGTTCAACCACAGTTCCAAAAATGGTTAACCAAGCTTTTGGGGTATGATTTTGAGATTATGTACCAACCC
GGACTCCAAAATAAGGCAGCCGATGCACTTTCAAGGGTGGAGAACTCACCGGAGCTGAATACAATGTCAACATCTGGCATTGTGGATATGGAAATAGTTACCAAAGAAGT
TGAGAAAGATGAAGAACTCCAACAACTAACGCTGCAACTTCAATCTGACCACCCACCTGAAGGAAAGTACTCATTGGTCAACAGCAAGCTACTGTACAAGGGACGAGTAG
TGTTATCTAAATCATCATCTCTCATACCGAGCCTTTTGCACACATTCCATGACTCTATTTTTAGAGGCCATTCAAGTTTCCTAAGAACCTACAAACGAATGAGTGGTGAG
CTTTATTGGAAGGGAATGAAGGCAGACATTAAGAGCTATGTAGAGCAATGCGAGATATGTCAAAGAAATAAGTATGAAGCTACCAAGCCAGCAGGGGTTCTTCAGCCGCT
ACCCATACCGGAAAGAATTTTGGAAGACTGGACTATGGACTTCATAGAAGGACTTCCTAAAGCAGGGGGCATGAATGTAATTATGGTAGTGGTAGATCGATTAAGCAAAT
ATGCTTATTTCATCACCTTGAAACACTCATTTTAA

mRNA sequence

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Protein sequence

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MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPAT
FQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKKMWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPA
LPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQP
GLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGE
LYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

Cmc06g0168101 (gene) of Melon (Charmono) v1.1 genome