| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042206.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.4e-238 | 68.64 | Show/hide |
Query: CVVTDKNNQV----FMSGKREADNCYHWNSNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKE
C +T +NN V + + ++ C N+ T W KL +ISLRSLDKVI NEAVVGIPSLDINGKFFCGDC+VGKQTKTSHRRLKE
Subjt: CVVTDKNNQV----FMSGKREADNCYHWNSNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKE
Query: CYTIRVLKLLHLDLVGLMQTESLRGKKYVLVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFA
CY IRVL+LLHLDL+G MQTESLRGKKYVLV+ IIK+RSDHGKEFDNEDLNNFCQT+GIHHEF
Subjt: CYTIRVLKLLHLDLVGLMQTESLRGKKYVLVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFA
Query: APITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIK
APIT QQNGVVERKNRTLQEMARVMIHA NLPLNF AEAVNT CHI + TI T Y L YHRKWDVKSDQGIFLGYS NSRAYRVFNIK
Subjt: APITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIK
Query: SRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD---------------------------------------
S TVME INV+VNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQ D AKT+SNITD
Subjt: SRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD---------------------------------------
Query: --------------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKL
ELLQFK NN+WTLVPKPD ANIIGTKWIFKNKTDES SVIRN+ARLVAQGYAQV+GVD ++TFA VAR EAI LL SI+CFRKFKL
Subjt: --------------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKL
Query: FQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPK
FQMDVKSAFLNGYLNEEVYVAQ + FVD EFPQYVYK NKALYGLKQAPRAWY+ LTMYL ERGYSRGE DKTLFINRTST LIVAQIYVDDIIFGGFPK
Subjt: FQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPK
Query: TLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTV
TLV I++ KSEFEMSLVGELSCFL LQIKQR+EGIFISQEKY KNLVKKFGLD SQHKR THAKI KDTV
Subjt: TLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTV
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| KAA0042877.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0e+00 | 95.89 | Show/hide |
Query: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
MTNNRSFFTELEECA GRVTFGDRAKGK+IAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Subjt: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Query: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSH+RLKECYTIRVLKLLHLDLVGLMQTE +
Subjt: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
Query: LVIIIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKG
IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTL
Subjt: LVIIIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKG
Query: RKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITDELLQF
YHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITDE F
Subjt: RKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITDELLQF
Query: KCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVY
KCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVY
Subjt: KCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVY
Query: VAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSEFEMSLVG
VAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSEFEMSLVG
Subjt: VAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSEFEMSLVG
Query: ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVGV
ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVGV
Subjt: ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVGV
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| KAA0054435.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.1e-244 | 67.14 | Show/hide |
Query: TNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNS
T+ + LE+ +TFGD A GK+IAKGNIDK +TDKNNQV MSG+RE+DNCYHW+S
Subjt: TNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNS
Query: NGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYVL
NGSNICHLTK QTWLWHRKLG+ISLRSLDKVI NEAVVGIPSLDIN KFFCGDC+VGKQTK+SH +LKECYTIRVL+LLHLDL+G MQTESL GKKYVL
Subjt: NGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYVL
Query: VI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKN
V+ II+IRSDH KEFDNEDLNNFCQ EGIHHE AAPITPQQNGVVERKNRTLQEMARVMIHAKN
Subjt: VI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKN
Query: LPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETH
LPLNFWAEAVNTACHIHNRVTTRS T VTLYELWKGRKPN +R YRVFNIKS TVMETINV+VNDFE N+NQFNIEDDETH
Subjt: LPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETH
Query: VTPEVTSTPLDEMPKG--DSQLDHAKTD----SNITDELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETF
VTPEVTSTPLDEMPK + +++A D + + +ELLQFK NNVWTLVPKP+ AN VEGVD DETF
Subjt: VTPEVTSTPLDEMPKG--DSQLDHAKTD----SNITDELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETF
Query: ASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFIN
A VAR EAI LL SI+CFRKFKLFQM VKSAFLNGYLNEEVYV QP+ FVD EFPQYVYKLNKALY LKQAP+AWY+ LTMYLGER YSRGETDKTLFIN
Subjt: ASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFIN
Query: RTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
RTST+LIVAQIYVDDIIFGGFPKTLV I++ KSEFEMSLVGELSCFLGLQIKQRSEG+FISQEKYAKNLVKKFGLDQSQHKRT THAKITKD VG
Subjt: RTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
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| KAA0059174.1 F5J5.1 [Cucumis melo var. makuwa] | 3.4e-214 | 56.9 | Show/hide |
Query: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
MT+NRSFFTELEECASG V F D AKGK+IAKGNIDKSNLPCL++VRYVDGLK NLIS SQLCDQGYSVNFNNTGCVVT+KNNQVF+SG READNCYHW+
Subjt: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Query: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
SNGSNICHLTK QTWLWHRKLG+ISLRSLDKVI NEA++GIPSLDINGKFFCGDC+VGKQTKTSHRRL ECYTI L+LLHLDL+ LMQ ESL GKKYV
Subjt: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
Query: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
V+ II+IRSDHGK+FDNE+LNNFCQTEGIHHEFAAPITPQQN VVERKNRTLQEMAR
Subjt: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
Query: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDET
N+RAYRVFNIKS TVMETINV+VNDFESNVNQFNIEDDET
Subjt: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDET
Query: HVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD--------------------------------------------------------------------
HVTP+VTSTPLDEMPKGDSQ D+AKTDS ITD
Subjt: HVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD--------------------------------------------------------------------
Query: -------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKS
ELLQFK NNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQ DV S
Subjt: -------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKS
Query: AFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISL
FLNGYLNEEVYVAQP+ FVD+EFPQY+YKLNKALYGLKQAP R TDLIVAQIYVDDIIFGGFPKTL
Subjt: AFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISL
Query: TTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
IKQRSE +FISQEKY KNLVKKFGLD SQ+KRT THAKITKDTVG
Subjt: TTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
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| TYK26041.1 gag/pol polyprotein [Cucumis melo var. makuwa] | 1.1e-238 | 62.38 | Show/hide |
Query: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
MT NRSFFTELEECASG VTFGD AKGK+IAKGN+DKSNLP ++EVRYVDGLK NLISVSQLCDQGYSVNFNNT CV TDKNNQVF+SG+REA+NC HW+
Subjt: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Query: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
SNGSNICHLTK QTWLWHRKLG+ISLRSLDKVI N+AVVGIPSLDINGKFFCGDC+VGKQTK SHRRLKECYTIRVL+LLHLDL+G M+TESL KKYV
Subjt: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
Query: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
LV+ II+IRSDHGKEFDNEDLNNFCQTEGIHHEF APITPQQNGVVERKNRT
Subjt: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
Query: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPN------------------YHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVM
VTTRS T + LYELWKGRKPN YHRKWDVKSDQ IFLGYSQNSR YRVFNIKS TVMETINV+
Subjt: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPN------------------YHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVM
Query: VNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD----------------------------------------------ELLQ
VNDF+SNVNQFNIEDDETHVTPEVTS+PLDEMPKGDSQ D AKT+SNI D ELLQ
Subjt: VNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD----------------------------------------------ELLQ
Query: FKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEV
FK NNVWTLVPKPD AN+IGTKWIFKNKTDESG++ + A C ++ ++ F+ +K
Subjt: FKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEV
Query: YVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMS
YVYKLNKALYGLKQAP AWY+ LTMYLGERGYSRGETDKT+F+NRT+ DLIVAQIYVDDIIFGGFPKTLV I++ KSEFEMS
Subjt: YVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMS
Query: LVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQ
LVGELSC LGLQIKQRSEG+FISQEKYA NLVKKFGLD+
Subjt: LVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UVR7 F5J5.1 | 1.6e-214 | 56.9 | Show/hide |
Query: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
MT+NRSFFTELEECASG V F D AKGK+IAKGNIDKSNLPCL++VRYVDGLK NLIS SQLCDQGYSVNFNNTGCVVT+KNNQVF+SG READNCYHW+
Subjt: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Query: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
SNGSNICHLTK QTWLWHRKLG+ISLRSLDKVI NEA++GIPSLDINGKFFCGDC+VGKQTKTSHRRL ECYTI L+LLHLDL+ LMQ ESL GKKYV
Subjt: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
Query: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
V+ II+IRSDHGK+FDNE+LNNFCQTEGIHHEFAAPITPQQN VVERKNRTLQEMAR
Subjt: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
Query: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDET
N+RAYRVFNIKS TVMETINV+VNDFESNVNQFNIEDDET
Subjt: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDET
Query: HVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD--------------------------------------------------------------------
HVTP+VTSTPLDEMPKGDSQ D+AKTDS ITD
Subjt: HVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD--------------------------------------------------------------------
Query: -------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKS
ELLQFK NNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQ DV S
Subjt: -------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKS
Query: AFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISL
FLNGYLNEEVYVAQP+ FVD+EFPQY+YKLNKALYGLKQAP R TDLIVAQIYVDDIIFGGFPKTL
Subjt: AFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISL
Query: TTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
IKQRSE +FISQEKY KNLVKKFGLD SQ+KRT THAKITKDTVG
Subjt: TTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
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| A0A5D3C1P5 Gag-pol polyprotein | 0.0e+00 | 95.89 | Show/hide |
Query: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
MTNNRSFFTELEECA GRVTFGDRAKGK+IAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Subjt: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Query: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSH+RLKECYTIRVLKLLHLDLVGLMQTE +
Subjt: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
Query: LVIIIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKG
IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTL
Subjt: LVIIIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKG
Query: RKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITDELLQF
YHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITDE F
Subjt: RKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITDELLQF
Query: KCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVY
KCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVY
Subjt: KCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVY
Query: VAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSEFEMSLVG
VAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSEFEMSLVG
Subjt: VAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSEFEMSLVG
Query: ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVGV
ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVGV
Subjt: ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVGV
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| A0A5D3CS19 Gag-pol polyprotein | 5.2e-245 | 67.14 | Show/hide |
Query: TNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNS
T+ + LE+ +TFGD A GK+IAKGNIDK +TDKNNQV MSG+RE+DNCYHW+S
Subjt: TNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNS
Query: NGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYVL
NGSNICHLTK QTWLWHRKLG+ISLRSLDKVI NEAVVGIPSLDIN KFFCGDC+VGKQTK+SH +LKECYTIRVL+LLHLDL+G MQTESL GKKYVL
Subjt: NGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYVL
Query: VI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKN
V+ II+IRSDH KEFDNEDLNNFCQ EGIHHE AAPITPQQNGVVERKNRTLQEMARVMIHAKN
Subjt: VI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKN
Query: LPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETH
LPLNFWAEAVNTACHIHNRVTTRS T VTLYELWKGRKPN +R YRVFNIKS TVMETINV+VNDFE N+NQFNIEDDETH
Subjt: LPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVNDFESNVNQFNIEDDETH
Query: VTPEVTSTPLDEMPKG--DSQLDHAKTD----SNITDELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETF
VTPEVTSTPLDEMPK + +++A D + + +ELLQFK NNVWTLVPKP+ AN VEGVD DETF
Subjt: VTPEVTSTPLDEMPKG--DSQLDHAKTD----SNITDELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETF
Query: ASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFIN
A VAR EAI LL SI+CFRKFKLFQM VKSAFLNGYLNEEVYV QP+ FVD EFPQYVYKLNKALY LKQAP+AWY+ LTMYLGER YSRGETDKTLFIN
Subjt: ASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFIN
Query: RTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
RTST+LIVAQIYVDDIIFGGFPKTLV I++ KSEFEMSLVGELSCFLGLQIKQRSEG+FISQEKYAKNLVKKFGLDQSQHKRT THAKITKD VG
Subjt: RTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTVG
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| A0A5D3DQT9 Gag/pol polyprotein | 5.6e-239 | 62.38 | Show/hide |
Query: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
MT NRSFFTELEECASG VTFGD AKGK+IAKGN+DKSNLP ++EVRYVDGLK NLISVSQLCDQGYSVNFNNT CV TDKNNQVF+SG+REA+NC HW+
Subjt: MTNNRSFFTELEECASGRVTFGDRAKGKLIAKGNIDKSNLPCLDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWN
Query: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
SNGSNICHLTK QTWLWHRKLG+ISLRSLDKVI N+AVVGIPSLDINGKFFCGDC+VGKQTK SHRRLKECYTIRVL+LLHLDL+G M+TESL KKYV
Subjt: SNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYV
Query: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
LV+ II+IRSDHGKEFDNEDLNNFCQTEGIHHEF APITPQQNGVVERKNRT
Subjt: LVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAK
Query: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPN------------------YHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVM
VTTRS T + LYELWKGRKPN YHRKWDVKSDQ IFLGYSQNSR YRVFNIKS TVMETINV+
Subjt: NLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPN------------------YHRKWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVM
Query: VNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD----------------------------------------------ELLQ
VNDF+SNVNQFNIEDDETHVTPEVTS+PLDEMPKGDSQ D AKT+SNI D ELLQ
Subjt: VNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD----------------------------------------------ELLQ
Query: FKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEV
FK NNVWTLVPKPD AN+IGTKWIFKNKTDESG++ + A C ++ ++ F+ +K
Subjt: FKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEV
Query: YVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMS
YVYKLNKALYGLKQAP AWY+ LTMYLGERGYSRGETDKT+F+NRT+ DLIVAQIYVDDIIFGGFPKTLV I++ KSEFEMS
Subjt: YVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLV--IISLTTKSEFEMS
Query: LVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQ
LVGELSC LGLQIKQRSEG+FISQEKYA NLVKKFGLD+
Subjt: LVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQ
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| A0A5D3DSN1 Gag-pol polyprotein | 2.1e-238 | 68.64 | Show/hide |
Query: CVVTDKNNQV----FMSGKREADNCYHWNSNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKE
C +T +NN V + + ++ C N+ T W KL +ISLRSLDKVI NEAVVGIPSLDINGKFFCGDC+VGKQTKTSHRRLKE
Subjt: CVVTDKNNQV----FMSGKREADNCYHWNSNGSNICHLTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKE
Query: CYTIRVLKLLHLDLVGLMQTESLRGKKYVLVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFA
CY IRVL+LLHLDL+G MQTESLRGKKYVLV+ IIK+RSDHGKEFDNEDLNNFCQT+GIHHEF
Subjt: CYTIRVLKLLHLDLVGLMQTESLRGKKYVLVI-------------------------------------IIKIRSDHGKEFDNEDLNNFCQTEGIHHEFA
Query: APITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIK
APIT QQNGVVERKNRTLQEMARVMIHA NLPLNF AEAVNT CHI + TI T Y L YHRKWDVKSDQGIFLGYS NSRAYRVFNIK
Subjt: APITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNYHRKWDVKSDQGIFLGYSQNSRAYRVFNIK
Query: SRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD---------------------------------------
S TVME INV+VNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQ D AKT+SNITD
Subjt: SRTVMETINVMVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGDSQLDHAKTDSNITD---------------------------------------
Query: --------------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKL
ELLQFK NN+WTLVPKPD ANIIGTKWIFKNKTDES SVIRN+ARLVAQGYAQV+GVD ++TFA VAR EAI LL SI+CFRKFKL
Subjt: --------------ELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKL
Query: FQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPK
FQMDVKSAFLNGYLNEEVYVAQ + FVD EFPQYVYK NKALYGLKQAPRAWY+ LTMYL ERGYSRGE DKTLFINRTST LIVAQIYVDDIIFGGFPK
Subjt: FQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPK
Query: TLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTV
TLV I++ KSEFEMSLVGELSCFL LQIKQR+EGIFISQEKY KNLVKKFGLD SQHKR THAKI KDTV
Subjt: TLV--IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITKDTV
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.4e-53 | 24.66 | Show/hide |
Query: LDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICHLTKGYQTWLWHRKLGYIS----LRSLDKVIINEA
L++V + NL+SV +L + G S+ F+ +G V KN + + +N N +I K LWH + G+IS L K + ++
Subjt: LDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICHLTKGYQTWLWHRKLGYIS----LRSLDKVIINEA
Query: VVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKE-CYTIRVLKLLHLDLVGLMQTESLRGKKYVLVII-----------IKIRS-----------------
+ + +L+++ + C C GKQ + ++LK+ + R L ++H D+ G + +L K Y ++ + IK +S
Subjt: VVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKE-CYTIRVLKLLHLDLVGLMQTESLRGKKYVLVII-----------IKIRS-----------------
Query: ---------DHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRS--DTIVTLYELW
D+G+E+ + ++ FC +GI + P TPQ NGV ER RT+ E AR M+ L +FW EAV TA ++ NR+ +R+ D+ T YE+W
Subjt: ---------DHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRS--DTIVTLYELW
Query: KGRKP-----------------NYHRKWDVKSDQGIFLGYSQ---------------------------NSRAYRV------------------------
+KP N K+D KS + IF+GY NSRA +
Subjt: KGRKP-----------------NYHRKWDVKSDQGIFLGYSQ---------------------------NSRAYRV------------------------
Query: ---------------------------FNIKSRTVMET-----------INVMVNDFESN----------------------------------------
F SR +++T I + + ESN
Subjt: ---------------------------FNIKSRTVMET-----------INVMVNDFESN----------------------------------------
Query: -------------VNQ------------FNIEDDETHVTPEVTSTPLDEMPKGDSQL----DHAKTDSNITDELLQFKCNNVWTLVPKPDEANIIGTKWI
+N+ +N ED+ + T +++P ++ D + + I EL K NN WT+ +P+ NI+ ++W+
Subjt: -------------VNQ------------FNIEDDETHVTPEVTSTPLDEMPKGDSQL----DHAKTDSNITDELLQFKCNNVWTLVPKPDEANIIGTKWI
Query: FKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKAL
F K +E G+ IR KARLVA+G+ Q +D +ETFA VAR + + S+ K+ QMDVK+AFLNG L EE+Y+ P+ V KLNKA+
Subjt: FKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKAL
Query: YGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFI--NRTSTDLIVAQIYVDDIIFG-GFPKTLVIISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFIS
YGLKQA R W++ L E + D+ ++I + I +YVDD++ G + +F M+ + E+ F+G++I+ + + I++S
Subjt: YGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFI--NRTSTDLIVAQIYVDDIIFG-GFPKTLVIISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFIS
Query: QEKYAKNLVKKFGLD
Q Y K ++ KF ++
Subjt: QEKYAKNLVKKFGLD
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-63 | 26.82 | Show/hide |
Query: GRVTFGDRAKGKLIAKGNI-DKSNLPC---LDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICH----
G V G+ + K+ G+I K+N+ C L +VR+V L+ NLIS L GY F N +T K + V G Y N + IC
Subjt: GRVTFGDRAKGKLIAKGNI-DKSNLPC---LDEVRYVDGLKANLISVSQLCDQGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICH----
Query: -LTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYVLVII---
LWH+++G++S + L + + + C C GKQ + S + E + +L L++ D+ G M+ ES+ G KY + I
Subjt: -LTKGYQTWLWHRKLGYISLRSLDKVIINEAVVGIPSLDINGKFFCGDCKVGKQTKTSHRRLKECYTIRVLKLLHLDLVGLMQTESLRGKKYVLVII---
Query: ----------------------------------IKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFW
++RSD+G E+ + + +C + GI HE P TPQ NGV ER NRT+ E R M+ LP +FW
Subjt: ----------------------------------IKIRSDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFW
Query: AEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNY------------------HRKWDVKSDQGIFLGYSQNSRAYRVFN------IKSRTVM-------
EAV TAC++ NR + +W ++ +Y K D KS IF+GY YR+++ I+SR V+
Subjt: AEAVNTACHIHNRVTTRSDTIVTLYELWKGRKPNY------------------HRKWDVKSDQGIFLGYSQNSRAYRVFN------IKSRTVM-------
Query: -------ETINVMVNDF-------------ESNVNQFN-------------------IEDDETHVTPEVTSTPL--DEMPKGDSQ---------------
+ N ++ +F ES ++ + +E+ E E PL E P+ +S+
Subjt: -------ETINVMVNDF-------------ESNVNQFN-------------------IEDDETHVTPEVTSTPL--DEMPKGDSQ---------------
Query: -------LDHAKTD---SNITDELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSI
L H + + + +E+ + N + LV P + KW+FK K D ++R KARLV +G+ Q +G+D DE F+ V + +I + S+
Subjt: -------LDHAKTD---SNITDELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSI
Query: ACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTS-TDLIVAQIYVD
A ++ Q+DVK+AFL+G L EE+Y+ QP F V KLNK+LYGLKQAPR WY ++ + Y + +D ++ R S + I+ +YVD
Subjt: ACFRKFKLFQMDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTS-TDLIVAQIYVD
Query: DIIFGGFPKTLVI-ISLTTKSEFEMSLVGELSCFLGLQI--KQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITK
D++ G K L+ + F+M +G LG++I ++ S +++SQEKY + ++++F + ++ T H K++K
Subjt: DIIFGGFPKTLVI-ISLTTKSEFEMSLVGELSCFLGLQI--KQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKITK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 6.7e-16 | 37.06 | Show/hide |
Query: MDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGG-FPKT
MDV +AFLN ++E +YV QP FV+ P YV++L +YGLKQAP W + + L + G+ R E + L+ TS I +YVDD++ PK
Subjt: MDVKSAFLNGYLNEEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGG-FPKT
Query: LVIISLTTKSEFEMSLVGELSCFLGLQIKQRSEG-IFISQEKY
+ + M +G++ FLGL I Q S G I +S + Y
Subjt: LVIISLTTKSEFEMSLVGELSCFLGLQIKQRSEG-IFISQEKY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-41 | 38.65 | Show/hide |
Query: NNVWTLV-PKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYV
N+ W LV P P I+G +WIF K + GS+ R KARLVA+GY Q G+D ETF+ V + +I ++ +A R + + Q+DV +AFL G L ++VY+
Subjt: NNVWTLV-PKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLNEEVYV
Query: AQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSE-FEMSLVG
+QP F+D + P YV KL KALYGLKQAPRAWY L YL G+ +D +LF+ + ++ +YVDDI+ G TL+ +L S+ F +
Subjt: AQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSE-FEMSLVG
Query: ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKIT
EL FLG++ K+ G+ +SQ +Y +L+ + + ++ T K++
Subjt: ELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKIT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.4e-15 | 25.85 | Show/hide |
Query: LDEVRYVDGLKANLISVSQLCD-QGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICHLTKGYQTWL----WHRKLGYISLRSLDKVIINE
L + YV + NLISV +LC+ G SV F V D N V + + D Y W S L + WH +LG+ + L+ VI N
Subjt: LDEVRYVDGLKANLISVSQLCD-QGYSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICHLTKGYQTWL----WHRKLGYISLRSLDKVIINE
Query: AVVGIPSLDINGKFF-CGDCKVGKQTK--------TSHRRLK--------------ECYTIRVLKLLHLD----LVGLMQTESLRGKKYVLVIIIKIR--
+ L+ + KF C DC + K K S R L+ + Y V+ + H L L Q ++ +++ R
Subjt: AVVGIPSLDINGKFF-CGDCKVGKQTK--------TSHRRLK--------------ECYTIRVLKLLHLD----LVGLMQTESLRGKKYVLVIIIKIR--
Query: -------SDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGR
SD+G EF L + GI H + P TP+ NG+ ERK+R + E ++ ++P +W A A ++ NR+ T + + ++ G
Subjt: -------SDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKGR
Query: KPNYHR------------------KWDVKSDQGIFLGYSQNSRAYRVFNIKS
PNY + K D KS Q +FLGYS AY ++++
Subjt: KPNYHR------------------KWDVKSDQGIFLGYSQNSRAYRVFNIKS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-47 | 23.83 | Show/hide |
Query: LDEVRYVDGLKANLISVSQLCDQG-YSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICHL-----TKGYQTWLWHRKLGYISLRSLDKVIIN
L++V YV + NLISV +LC+ SV F V D N V + + D Y W S + +K + WH +LG+ SL L+ VI N
Subjt: LDEVRYVDGLKANLISVSQLCDQG-YSVNFNNTGCVVTDKNNQVFMSGKREADNCYHWNSNGSNICHL-----TKGYQTWLWHRKLGYISLRSLDKVIIN
Query: EAVVGIPSLDINGKFF-CGDCKVGKQTK--------TSHRRLKECYT-IRVLKLLHLD-----------------LVGLMQTESLRGKKYVLVIIIKIR-
+ +P L+ + K C DC + K K TS + L+ Y+ + +L +D L L Q ++ + +++ R
Subjt: EAVVGIPSLDINGKFF-CGDCKVGKQTK--------TSHRRLKECYT-IRVLKLLHLD-----------------LVGLMQTESLRGKKYVLVIIIKIR-
Query: --------SDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKG
SD+G EF L ++ GI H + P TP+ NG+ ERK+R + EM ++ ++P +W A + A ++ NR+ T + + ++ G
Subjt: --------SDHGKEFDNEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSDTIVTLYELWKG
Query: RKPNYHR------------------KWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVND--FESNVNQFNIEDDE------------------
+ PNY + K + KS Q F+GYS AY +I + + + +V ++ F + F + +
Subjt: RKPNYHR------------------KWDVKSDQGIFLGYSQNSRAYRVFNIKSRTVMETINVMVND--FESNVNQFNIEDDE------------------
Query: ------------------------------------------------------THVTPEVTSTP----------------------------LDEMPKG
+H P+ T+ P +P+
Subjt: ------------------------------------------------------THVTPEVTSTP----------------------------LDEMPKG
Query: DSQLDHAKTDSNITDE----------------------LLQFKC--------------------------------------------------------
H T S E ++Q
Subjt: DSQLDHAKTDSNITDE----------------------LLQFKC--------------------------------------------------------
Query: -----NNVWTLV-PKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLN
N+ W LV P P I+G +WIF K + GS+ R KARLVA+GY Q G+D ETF+ V + +I ++ +A R + + Q+DV +AFL G L
Subjt: -----NNVWTLV-PKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGYLN
Query: EEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSE-FE
+EVY++QP FVD + P YV +L KA+YGLKQAPRAWY L YL G+ +D +LF+ + +I +YVDDI+ G L+ +L S+ F
Subjt: EEVYVAQPREFVDYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVIISLTTKSE-FE
Query: MSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKIT
+ +L FLG++ K+ +G+ +SQ +Y +L+ + + ++ T T K+T
Subjt: MSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGLDQSQHKRTSTTTHAKIT
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.4e-38 | 37.14 | Show/hide |
Query: DELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGY
DE+ + + W + P IG KW++K K + G++ R KARLVA+GY Q EG+D ETF+ V + ++ L+ +I+ F L Q+D+ +AFLNG
Subjt: DELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIACFRKFKLFQMDVKSAFLNGY
Query: LNEEVYVAQPREFV----DYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLV-IISLT
L+EE+Y+ P + D P V L K++YGLKQA R W+ ++ L G+ + +D T F+ T+T + +YVDDII V +
Subjt: LNEEVYVAQPREFV----DYEFPQYVYKLNKALYGLKQAPRAWYKGLTMYLGERGYSRGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLV-IISLT
Query: TKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGL
KS F++ +G L FLGL+I + + GI I Q KYA +L+ + GL
Subjt: TKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGL
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 6.5e-06 | 38.81 | Show/hide |
Query: IYVDDIIFGGFPKTLV-IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGL
+YVDDI+ G TL+ ++ S F M +G + FLG+QIK G+F+SQ KYA+ ++ G+
Subjt: IYVDDIIFGGFPKTLV-IISLTTKSEFEMSLVGELSCFLGLQIKQRSEGIFISQEKYAKNLVKKFGL
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4e-11 | 42.5 | Show/hide |
Query: DELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIA
+EL N W LVP P NI+G KW+FK K G++ R KARLVA+G+ Q EG+ ET++ V R I + ++A
Subjt: DELLQFKCNNVWTLVPKPDEANIIGTKWIFKNKTDESGSVIRNKARLVAQGYAQVEGVDLDETFASVARFEAICLLFSIA
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