| GenBank top hits | e value | %identity | Alignment |
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| KAA0038947.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.9e-57 | 91.74 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAH LNIPM+VRSLDVKKDIFRPREDNEELLGP+VPYL+AIGALMYLANNTR DI+FSVNLL RYSSSPTKRHWNEVKHVLRYLRGTID+GLFYSNKS
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
NFDLVGYADAGY+SDP KARS
Subjt: NFDLVGYADAGYVSDPHKARS
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| KAA0067250.1 Pol [Cucumis melo var. makuwa] | 8.6e-57 | 92.56 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAHPLNIPM+VRSLDVKKDIFRPREDNEELLGP+VPYLSAIGALM LANNTR DIAFSVNLL RYSSSPTKRHWN VKHVLRYLRGTIDM LFYSNKS
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
NFDLVGYADAGY+SDP KARS
Subjt: NFDLVGYADAGYVSDPHKARS
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| RVW51051.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.5e-48 | 80.17 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAHPL+ PM+VRSLDVKKD FRP E +EELLGP+VPYLSAIGALMYLAN TR DIAFSVNLL RYSSSPT+RHWN +KH+LRYLRGT DMGLFYS +S
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
L+GYADAGY+SDPHK RS
Subjt: NFDLVGYADAGYVSDPHKARS
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| RVW93168.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.5e-48 | 80.17 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAHPL+ PM+VRSLDVKKD FRP E +EELLGP+VPYLSAIGALMYLAN TR DIAFSVNLL RYSSSPT+RHWN +KH+LRYLRGT DMGLFYS +S
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
L+GYADAGY+SDPHK RS
Subjt: NFDLVGYADAGYVSDPHKARS
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| TYK21506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.9e-52 | 93.69 | Show/hide |
Query: MLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
MLVRSLDVKKDIFRPREDNEELLGP+VPYLSAIGALMYLANNTR DIAFSVNLL RYS SPTKRHWN VKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Subjt: MLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Query: GYVSDPHKARS
G++SDPHKARS
Subjt: GYVSDPHKARS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FB90 Reverse transcriptase Ty1/copia-type domain-containing protein | 6.5e-50 | 83.47 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAHPL+ PM+VRSLDVKKD FRP+E EE LGPKVPYLSAIGALMYLAN TR DIAFSVNLL RYSS+PT RHWN VKHVLRYLRGT DMGLFY NKS
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
N LVGYADAGY+SDPHK RS
Subjt: NFDLVGYADAGYVSDPHKARS
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| A0A2N9HV99 Reverse transcriptase Ty1/copia-type domain-containing protein | 6.5e-50 | 83.47 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAHPL+ PM+VRSLDVKKD FRP+E EE LGPKVPYLSAIGALMYLAN TR DIAFSVNLL RYSS+PT RHWN VKHVLRYLRGT DMGLFY NKS
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
N LVGYADAGY+SDPHK RS
Subjt: NFDLVGYADAGYVSDPHKARS
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| A0A5D3CGU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-57 | 91.74 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAH LNIPM+VRSLDVKKDIFRPREDNEELLGP+VPYL+AIGALMYLANNTR DI+FSVNLL RYSSSPTKRHWNEVKHVLRYLRGTID+GLFYSNKS
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
NFDLVGYADAGY+SDP KARS
Subjt: NFDLVGYADAGYVSDPHKARS
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| A0A5D3CKU4 Pol | 4.2e-57 | 92.56 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
MDKAHPLNIPM+VRSLDVKKDIFRPREDNEELLGP+VPYLSAIGALM LANNTR DIAFSVNLL RYSSSPTKRHWN VKHVLRYLRGTIDM LFYSNKS
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
NFDLVGYADAGY+SDP KARS
Subjt: NFDLVGYADAGYVSDPHKARS
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| A0A5D3DD63 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-52 | 93.69 | Show/hide |
Query: MLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
MLVRSLDVKKDIFRPREDNEELLGP+VPYLSAIGALMYLANNTR DIAFSVNLL RYS SPTKRHWN VKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Subjt: MLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Query: GYVSDPHKARS
G++SDPHKARS
Subjt: GYVSDPHKARS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.0e-11 | 41.49 | Show/hide |
Query: PREDNEELLGP----KVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFD--LVGYADAGY
P + N ELL P S IG LMY+ TR D+ +VN+L RYSS W +K VLRYL+GTIDM L + F+ ++GY D+ +
Subjt: PREDNEELLGP----KVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFD--LVGYADAGY
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| P0CV72 Secreted RxLR effector protein 161 | 1.9e-14 | 45.88 | Show/hide |
Query: VPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGYVSDPHKARS
VPYLSA+GA+MYL TR D+A +V +L +++S P HW +K VLRYL+ T GL ++ LVGY+DA + D RS
Subjt: VPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGYVSDPHKARS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.9e-12 | 39.67 | Show/hide |
Query: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
M A P++ P L L + K + P E+ KVPY SA+G+LMY TR DIA +V ++ R+ +P K HW VK +LRYLRGT L + S
Subjt: MDKAHPLNIPMLVRSLDVKKDIFRPREDNEELLGPKVPYLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAGYVSDPHKARS
+ L GY DA D +S
Subjt: NFDLVGYADAGYVSDPHKARS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-08 | 38.96 | Show/hide |
Query: YLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGYVSD
Y +G+L YLA TR DI+++VN L ++ PT+ H +K +LRYL GT + G+F + L Y+DA + D
Subjt: YLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGYVSD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-11 | 43.02 | Show/hide |
Query: GPKVP----YLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGYVSD
G K+P Y +G+L YLA TR D++++VN L +Y PT HWN +K VLRYL GT D G+F + L Y+DA + D
Subjt: GPKVP----YLSAIGALMYLANNTRLDIAFSVNLLVRYSSSPTKRHWNEVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGYVSD
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