| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.3e-57 | 86.82 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
M+KSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYMVQPEGFI + QEQKVCKLQKSIY LKQASRSWNIRFD A+KSY FEQNVDEPCVYK+I+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWL
VAFL+LYVDDILLIGNDV +L D+KKWL
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWL
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 7.5e-61 | 93.02 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIY LKQASRSWNIRFD +KSY FEQNVDEPCVYKRIINS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWL
TVAFLVLYVDDILLIGN+V HL DIK+WL
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWL
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| TYJ99632.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-57 | 77.18 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
M+KSIRILLSI TFYDYEIWQMDVKTAFLN NLEESI+M QPEGFI +GQEQKVCKL +SIY LKQASRSWNIRFD A+KSY F+QNVDEPCVYK+I
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWLAA-IPNERFGKCTICSWCPN
VAFLVLY++ ILLIGNDVG+L D+K WLAA NERF + ICSW PN
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWLAA-IPNERFGKCTICSWCPN
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-59 | 91.54 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKT FLN NLEESIYMVQPE FIQKGQEQK+CKLQKSIY LKQASRS NIRFD A+KSY EQNVDEPCVYKRI+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
TVAFLVLYVDDILLIGNDVGHLADIKKWLA
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 9.2e-59 | 86.15 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
M+KSIRILLSIATFYDYEIWQ+DVKTAFLNGNLEESIYM QPEGFI+KGQEQK+CK QKSIY LKQASRSWNIRFD A+KSY FEQNVD+PCVYK+++NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
VAFLVLYVDDILL+GNDVG+L DIKKWLA
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 3.6e-61 | 93.02 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIY LKQASRSWNIRFD +KSY FEQNVDEPCVYKRIINS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWL
TVAFLVLYVDDILLIGN+V HL DIK+WL
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWL
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| A0A5D3BIR3 Gag/pol protein | 4.9e-58 | 77.18 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
M+KSIRILLSI TFYDYEIWQMDVKTAFLN NLEESI+M QPEGFI +GQEQKVCKL +SIY LKQASRSWNIRFD A+KSY F+QNVDEPCVYK+I
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWLAA-IPNERFGKCTICSWCPN
VAFLVLY++ ILLIGNDVG+L D+K WLAA NERF + ICSW PN
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWLAA-IPNERFGKCTICSWCPN
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| A0A5D3BX45 Gag/pol protein | 1.5e-59 | 91.54 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
MIKSIRILLSIATFYDYEIWQMDVKT FLN NLEESIYMVQPE FIQKGQEQK+CKLQKSIY LKQASRS NIRFD A+KSY EQNVDEPCVYKRI+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
TVAFLVLYVDDILLIGNDVGHLADIKKWLA
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
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| A0A5D3CDT9 Gag/pol protein | 4.4e-59 | 86.15 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
M+KSIRILLSIATFYDYEIWQ+DVKTAFLNGNLEESIYM QPEGFI+KGQEQK+CK QKSIY LKQASRSWNIRFD A+KSY FEQNVD+PCVYK+++NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
VAFLVLYVDDILL+GNDVG+L DIKKWLA
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWLA
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| E2GK51 Gag/pol protein (Fragment) | 1.1e-57 | 86.82 | Show/hide |
Query: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
M+KSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYMVQPEGFI + QEQKVCKLQKSIY LKQASRSWNIRFD A+KSY FEQNVDEPCVYK+I+NS
Subjt: MIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINS
Query: TVAFLVLYVDDILLIGNDVGHLADIKKWL
VAFL+LYVDDILLIGNDV +L D+KKWL
Subjt: TVAFLVLYVDDILLIGNDVGHLADIKKWL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.3e-19 | 41.22 | Show/hide |
Query: IKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVY---KRII
I S R +LS+ Y+ ++ QMDVKTAFLNG L+E IYM P+G VCKL K+IY LKQA+R W F+ A+K F + + C+Y K I
Subjt: IKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVY---KRII
Query: NSTVAFLVLYVDDILLIGNDVGHLADIKKWL
N + +++LYVDD+++ D+ + + K++L
Subjt: NSTVAFLVLYVDDILLIGNDVGHLADIKKWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-28 | 51.61 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVY-KRIINSTV
SIR +LS+A D E+ Q+DVKTAFL+G+LEE IYM QPEGF G++ VCKL KS+Y LKQA R W ++FD +KS ++ + +PCVY KR +
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVY-KRIINSTV
Query: AFLVLYVDDILLIGNDVGHLADIK
L+LYVDD+L++G D G +A +K
Subjt: AFLVLYVDDILLIGNDVGHLADIK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.1e-09 | 36.56 | Show/hide |
Query: MDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINSTVAFLVLYVDDILL
MDV TAFLN ++E IY+ QP GF+ + V +L +Y LKQA WN + +K F ++ E +Y R + ++ +YVDD+L+
Subjt: MDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINSTVAFLVLYVDDILL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-18 | 40 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINSTVA
SIRI+L +A + I Q+DV AFL G L + +YM QP GFI K + VCKL+K++Y LKQA R+W + + + F +V + ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINSTVA
Query: FLVLYVDDILLIGND
++++YVDDIL+ GND
Subjt: FLVLYVDDILLIGND
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.8e-18 | 38.26 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINSTVA
SIRI+L +A + I Q+DV AFL G L + +YM QP GF+ K + VC+L+K+IY LKQA R+W + + + F ++ + ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQKSIYELKQASRSWNIRFDIAVKSYSFEQNVDEPCVYKRIINSTVA
Query: FLVLYVDDILLIGND
++++YVDDIL+ GND
Subjt: FLVLYVDDILLIGND
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