; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0168441 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0168441
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr06:22213400..22214125
RNA-Seq ExpressionCmc06g0168441
SyntenyCmc06g0168441
Gene Ontology termsGO:0000105 - histidine biosynthetic process (biological process)
GO:0098542 - defense response to other organism (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0060320 - rejection of self pollen (biological process)
GO:0015074 - DNA integration (biological process)
GO:0007165 - signal transduction (biological process)
GO:0006633 - fatty acid biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0006351 - transcription, DNA-templated (biological process)
GO:0000428 - DNA-directed RNA polymerase complex (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005576 - extracellular region (cellular component)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
GO:0003879 - ATP phosphoribosyltransferase activity (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5956480.1 hypothetical protein HYC85_003705 [Camellia sinensis]2.8e-9971.78Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        ++SPE+P WKE + SEI+SI+ NHTWELVDLP    PLGCKWIFKRKMK +GSIDKYKARLV KGY+Q+E LDYFDTYSP+TRITSIR++IAI+AL   E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        I QMDVKTTFLNG+L+EEIYM+Q EGF +P Q KKVCKL++SLYGLKQAPKQWHEKFD+VM++NGF+INECDKC+Y K     +VI+CLYVDDMLIIGSN
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
          +IKTTK++L +KF++KDMG+ADVILGIKI++   G++LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

KZV39555.1 hypothetical protein F511_13790, partial [Dorcoceras hygrometricum]7.4e-10072.2Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        +S+PEAP+WKE +  EI+SIMHNHTWEL DLP    PLGCKWI KRK K DGSIDKYKARLVAKG++Q+E  D+FDTYSPVTRITSIR+LIAI+ALH  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGEL+EEIYM+Q EGFV P QEKKVCKL++SLYGLKQAPKQWHEKFDS M +NGFKINECDKCVY K      +I+C+YVDDMLI+G+N
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
          +I  TK+ML   FE KD+G+ D+ILGIKIS+TP G++LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

KZV51625.1 hypothetical protein F511_24998 [Dorcoceras hygrometricum]4.3e-10072.61Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        +S+PEAP+WKE +  EI+SIMHNHTWEL DLP    PLGCKWI KRK K DGSIDKYKARLVAKG++Q+E  D+FDTYSPVTRITSIR+LIAI+ALH  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGEL+EEIYM+Q EGFV P QEKKVCKL++SLYGLKQAPKQWHEKFDS M +NGFKINECDKCVY K      +I+CLYVDDMLI+G+N
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
          +I  TK+ML   FE KD+G+ D+ILGIKIS+TP G++LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

RVW42300.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]8.1e-10777.59Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        MSSPEA YWKE +NSEIESI+ NHTWELVDLP  +  LGCKWIFK+KMK DGS DKYKARLVAKGYKQ+E LDYFDTYSPV+RITSIRMLIAI+A++  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGELDEEIYM Q EGF++P QE+KVCKL++SLYGLKQAPKQWHEKFD+ M++NGFKINECDKCVY K+ Q  +VIVCLYVDDMLIIGS+
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         N+IK TKQML+++F+MKD+GVAD+ILGIK+SKT  GL+LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

RVW67960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.9e-10677.18Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        MSSPEA YWKE +NSEIESI+ NHTWELVDLP  +  LGCKWIFK+KMK +GSIDKYKARLVAKGYKQ+E LDYFDTYSPV++ITSIRMLIAI+A++  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGELDEEIYM Q EGF++P QE KVCKL++SLYGLKQAPKQWHEKFD+ M++NGFKINECDKCVY K+ Q  +VIVCLYVDDMLIIGS+
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         N+IK TKQML+++F+MKD+GVAD+ILGIK+SKT  GL+LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

TrEMBL top hitse value%identityAlignment
A0A2N9FGP9 Integrase catalytic domain-containing protein6.3e-10577.59Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        MS PEAP WKE VNSEIESI+ NHTWELVDLP    PLG KWIFKRKMK DGSIDKYKARLV KGYKQ+E +DYFDTYSPVTRITSIRMLIAI+AL+  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGELDEEIYM+Q EGF+ P +EKKVC+L++SLYGLKQAPKQWHEKFD+ MM+NGF+INECDKCVY K+  + +VIVCLYVDDMLI+GSN
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         +IIK TK+ML +KF+MKD+GVADVILGIKI++T  GL+LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

A0A2N9GAW9 Integrase catalytic domain-containing protein6.3e-10577.59Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        MS PEAP WKE VNSEIESI+ NHTWELVDLP    PLG KWIFKRKMK DGSIDKYKARLV KGYKQ+E +DYFDTYSPVTRITSIRMLIAI+AL+  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGELDEEIYM+Q EGF+ P +EKKVC+L++SLYGLKQAPKQWHEKFD+ MM+NGF+INECDKCVY K+  + +VIVCLYVDDMLI+GSN
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         +IIK TK+ML +KF+MKD+GVADVILGIKI++T  GL+LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

A0A2N9IGG8 Integrase catalytic domain-containing protein6.3e-10577.59Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        MS PEAP WKE VNSEIESI+ NHTWELVDLP    PLG KWIFKRKMK DGSIDKYKARLV KGYKQ+E +DYFDTYSPVTRITSIRMLIAI+AL+  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGELDEEIYM+Q EGF+ P +EKKVC+L++SLYGLKQAPKQWHEKFD+ MM+NGF+INECDKCVY K+  + +VIVCLYVDDMLI+GSN
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         +IIK TK+ML +KF+MKD+GVADVILGIKI++T  GL+LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

A0A438E3U6 Retrovirus-related Pol polyprotein from transposon TNT 1-943.9e-10777.59Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        MSSPEA YWKE +NSEIESI+ NHTWELVDLP  +  LGCKWIFK+KMK DGS DKYKARLVAKGYKQ+E LDYFDTYSPV+RITSIRMLIAI+A++  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGELDEEIYM Q EGF++P QE+KVCKL++SLYGLKQAPKQWHEKFD+ M++NGFKINECDKCVY K+ Q  +VIVCLYVDDMLIIGS+
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         N+IK TKQML+++F+MKD+GVAD+ILGIK+SKT  GL+LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

A0A438G6X1 Retrovirus-related Pol polyprotein from transposon TNT 1-943.3e-10677.18Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        MSSPEA YWKE +NSEIESI+ NHTWELVDLP  +  LGCKWIFK+KMK +GSIDKYKARLVAKGYKQ+E LDYFDTYSPV++ITSIRMLIAI+A++  E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN
        IHQMDVKT FLNGELDEEIYM Q EGF++P QE KVCKL++SLYGLKQAPKQWHEKFD+ M++NGFKINECDKCVY K+ Q  +VIVCLYVDDMLIIGS+
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSN

Query:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         N+IK TKQML+++F+MKD+GVAD+ILGIK+SKT  GL+LS
Subjt:  INIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.3e-4237.02Show/hide
Query:  WKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKT
        W+E +N+E+ +   N+TW +   P     +  +W+F  K    G+  +YKARLVA+G+ Q+ ++DY +T++PV RI+S R ++++   +  ++HQMDVKT
Subjt:  WKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKT

Query:  TFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYA--KSNQNDHVIVCLYVDDMLIIGSNINIIKT
         FLNG L EEIYM+  +G    S    VCKL +++YGLKQA + W E F+  +    F  +  D+C+Y   K N N+++ V LYVDD++I   ++  +  
Subjt:  TFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYA--KSNQNDHVIVCLYVDDMLIIGSNINIIKT

Query:  TKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
         K+ L  KF M D+      +GI+I      + LS
Subjt:  TKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.2e-5645.9Show/hide
Query:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE
        +S PE     + +  E+ES+  N T++LV+LP    PL CKW+FK K   D  + +YKARLV KG++Q++ +D+ + +SPV ++TSIR +++++A    E
Subjt:  MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFE

Query:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKS-NQNDHVIVCLYVDDMLIIGS
        + Q+DVKT FL+G+L+EEIYM+Q EGF    ++  VCKL +SLYGLKQAP+QW+ KFDS M +  +     D CVY K  ++N+ +I+ LYVDDMLI+G 
Subjt:  IHQMDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKS-NQNDHVIVCLYVDDMLIIGS

Query:  NINIIKTTKQMLANKFEMKDMGVADVILGIKI--SKTPQGLMLS
        +  +I   K  L+  F+MKD+G A  ILG+KI   +T + L LS
Subjt:  NINIIKTTKQMLANKFEMKDMGVADVILGIKI--SKTPQGLMLS

P25600 Putative transposon Ty5-1 protein YCL074W5.1e-1936.57Show/hide
Query:  MDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINI
        MDV T FLN  +DE IY++Q  GFV+      V +L   +YGLKQAP  W+E  ++ +   GF  +E +  +Y +S  +  + + +YVDD+L+   +  I
Subjt:  MDVKTTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINI

Query:  IKTTKQMLANKFEMKDMGVADVILGIKISKTPQG
            KQ L   + MKD+G  D  LG+ I ++  G
Subjt:  IKTTKQMLANKFEMKDMGVADVILGIKISKTPQG

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.0e-4739.74Show/hide
Query:  WKEDVNSEIESIMHNHTWELV-DLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVK
        W+  + SEI + + NHTW+LV   P   T +GC+WIF +K  +DGS+++YKARLVAKGY Q+  LDY +T+SPV + TSIR+++ ++    + I Q+DV 
Subjt:  WKEDVNSEIESIMHNHTWELV-DLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVK

Query:  TTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINIIKTT
          FL G L +++YM Q  GF+   +   VCKL ++LYGLKQAP+ W+ +  + ++  GF  +  D  ++        V + +YVDD+LI G++  ++  T
Subjt:  TTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINIIKTT

Query:  KQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
           L+ +F +KD       LGI+  + P GL LS
Subjt:  KQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.3e-4840.17Show/hide
Query:  WKEDVNSEIESIMHNHTWELVDLPLES-TPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVK
        W++ + SEI + + NHTW+LV  P  S T +GC+WIF +K  +DGS+++YKARLVAKGY Q+  LDY +T+SPV + TSIR+++ ++    + I Q+DV 
Subjt:  WKEDVNSEIESIMHNHTWELVDLPLES-TPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVK

Query:  TTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINIIKTT
          FL G L +E+YM Q  GFV   +   VC+L +++YGLKQAP+ W+ +  + ++  GF  +  D  ++        + + +YVDD+LI G++  ++K T
Subjt:  TTFLNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINIIKTT

Query:  KQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
           L+ +F +K+       LGI+  + PQGL LS
Subjt:  KQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.0e-5139.74Show/hide
Query:  WKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKT
        W   ++ EI ++   HTWE+  LP    P+GCKW++K K  +DG+I++YKARLVAKGY QQE +D+ +T+SPV ++TS+++++AISA++ F +HQ+D+  
Subjt:  WKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKT

Query:  TFLNGELDEEIYMQQLEGFVSPSQE----KKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINII
         FLNG+LDEEIYM+   G+ +   +      VC L +S+YGLKQA +QW  KF   ++  GF  +  D   + K      + V +YVDD++I  +N   +
Subjt:  TFLNGELDEEIYMQQLEGFVSPSQE----KKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINII

Query:  KTTKQMLANKFEMKDMGVADVILGIKISKTPQGL
           K  L + F+++D+G     LG++I+++  G+
Subjt:  KTTKQMLANKFEMKDMGVADVILGIKISKTPQGL

ATMG00810.1 DNA/RNA polymerases superfamily protein5.6e-0543.4Show/hide
Query:  LYVDDMLIIGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS
        LYVDD+L+ GS+  ++      L++ F MKD+G     LGI+I   P GL LS
Subjt:  LYVDDMLIIGSNINIIKTTKQMLANKFEMKDMGVADVILGIKISKTPQGLMLS

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)5.2e-1943.18Show/hide
Query:  PYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAIS
        P W + +  E++++  N TW LV  P+    LGCKW+FK K+ +DG++D+ KARLVAKG+ Q+E + + +TYSPV R  +IR ++ ++
Subjt:  PYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCTCCTGAAGCTCCATATTGGAAAGAAGATGTGAATAGTGAAATTGAGTCCATTATGCATAACCATACTTGGGAGCTAGTTGATCTTCCATTAGAAAGTACACC
ACTTGGTTGCAAATGGATTTTCAAACGGAAGATGAAGACCGATGGGTCAATAGATAAATATAAGGCAAGACTTGTTGCCAAAGGATATAAGCAACAAGAAAGACTTGACT
ATTTTGATACGTACTCACCAGTTACTAGAATTACTTCCATTCGCATGCTCATAGCAATATCAGCTTTGCATGGATTTGAGATACATCAGATGGATGTCAAAACAACATTT
TTAAATGGTGAGTTAGATGAAGAGATCTACATGCAACAACTTGAAGGGTTTGTTTCCCCCAGTCAAGAAAAGAAAGTTTGCAAATTAATTAGGTCTCTTTATGGACTAAA
ACAAGCACCAAAACAATGGCATGAAAAATTTGACAGTGTAATGATGGCCAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGCCAAAAGCAATCAGAATGACC
ATGTCATTGTGTGCCTGTATGTTGATGATATGCTAATTATAGGTAGCAATATCAACATTATTAAGACTACCAAACAAATGTTGGCCAATAAATTTGAGATGAAAGACATG
GGTGTCGCAGATGTTATTCTAGGTATTAAAATTTCTAAAACCCCACAAGGGTTAATGCTGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCTCCTGAAGCTCCATATTGGAAAGAAGATGTGAATAGTGAAATTGAGTCCATTATGCATAACCATACTTGGGAGCTAGTTGATCTTCCATTAGAAAGTACACC
ACTTGGTTGCAAATGGATTTTCAAACGGAAGATGAAGACCGATGGGTCAATAGATAAATATAAGGCAAGACTTGTTGCCAAAGGATATAAGCAACAAGAAAGACTTGACT
ATTTTGATACGTACTCACCAGTTACTAGAATTACTTCCATTCGCATGCTCATAGCAATATCAGCTTTGCATGGATTTGAGATACATCAGATGGATGTCAAAACAACATTT
TTAAATGGTGAGTTAGATGAAGAGATCTACATGCAACAACTTGAAGGGTTTGTTTCCCCCAGTCAAGAAAAGAAAGTTTGCAAATTAATTAGGTCTCTTTATGGACTAAA
ACAAGCACCAAAACAATGGCATGAAAAATTTGACAGTGTAATGATGGCCAATGGATTTAAAATCAATGAATGTGACAAATGTGTATATGCCAAAAGCAATCAGAATGACC
ATGTCATTGTGTGCCTGTATGTTGATGATATGCTAATTATAGGTAGCAATATCAACATTATTAAGACTACCAAACAAATGTTGGCCAATAAATTTGAGATGAAAGACATG
GGTGTCGCAGATGTTATTCTAGGTATTAAAATTTCTAAAACCCCACAAGGGTTAATGCTGTCTTAA
Protein sequenceShow/hide protein sequence
MSSPEAPYWKEDVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQERLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTF
LNGELDEEIYMQQLEGFVSPSQEKKVCKLIRSLYGLKQAPKQWHEKFDSVMMANGFKINECDKCVYAKSNQNDHVIVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM
GVADVILGIKISKTPQGLMLS