CuGenDBv2

Gene ID	Cmc06g0168641
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr06:22574125..22576284
RNA-Seq Expression	Cmc06g0168641
Synteny	Cmc06g0168641
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.85

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGL FER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKW QLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGM P
Subjt:  LMEFAYNNSYQATIGMAP

KAA0040695.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.99

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FS+IDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTL DNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR+FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA EFSLSSDGGL FER LCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVSRCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        K AHFVPGKSTYTASKW QLYMSEIVRLHGVPVSIVS+RDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.54

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFH QTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEF YNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.4

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Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR +VSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH Q DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.26

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

94.85

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGL FER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKW QLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGM P
Subjt:  LMEFAYNNSYQATIGMAP

A0A5A7TGX4 Reverse transcriptase

0.0e+00

94.99

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FS+IDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTL DNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR+FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA EFSLSSDGGL FER LCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVSRCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        K AHFVPGKSTYTASKW QLYMSEIVRLHGVPVSIVS+RDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

A0A5A7U330 Reverse transcriptase

0.0e+00

95.54

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFH QTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEF YNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

A0A5A7UAA8 Reverse transcriptase

0.0e+00

95.4

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Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR +VSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH Q DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

A0A5A7UP94 Pol protein

0.0e+00

95.26

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Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNK+TVKNRYPLPRIDDLFDQLQGAT+FSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFL HVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV                 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV-----------------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFH QTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAP
        LMEFAYNNSYQATIGMAP
Subjt:  LMEFAYNNSYQATIGMAP

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.8e-117

32.51

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A+                   I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GL  + + +
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP
          P +W  H+ L++ +YNN+  +   M P
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP

P0CT35 Transposon Tf2-2 polyprotein

1.8e-117

32.51

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Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A+                   I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GL  + + +
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP
          P +W  H+ L++ +YNN+  +   M P
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP

P0CT36 Transposon Tf2-3 polyprotein

1.8e-117

32.51

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Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A+                   I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GL  + + +
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP
          P +W  H+ L++ +YNN+  +   M P
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP

P0CT37 Transposon Tf2-4 polyprotein

1.8e-117

32.51

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Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A+                   I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GL  + + +
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP
          P +W  H+ L++ +YNN+  +   M P
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP

P0CT41 Transposon Tf2-12 polyprotein

1.8e-117

32.51

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Query:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+ + +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A+                   I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAV-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GL  + + +
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL--SFERR

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  +  QTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP
          P +W  H+ L++ +YNN+  +   M P
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.2e-26

45.04

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLS--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++L   H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLS--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACTGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTT
GTTAAGAAGAAGGACGGATCGATGCGTCTATGCATCGACTATAGGGAGTTGAACAAGATAACCGTAAAGAATAGATATCCCTTGCCCAGGATTGACGATCTATTC
GACCAGTTACAGGGAGCCACAATGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCC
AGATACGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACT
TTTGTGATCGTGTTTATCGACGACATCTTGATATACTCCAAGACGGAGGCCGAACACGAGAAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTG
TATGCAAAGTTCTCGAAATGTGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGAGTCACGTGGTTTCTAAGGCTGGGGTCTCTGTGGATCCAGCTAAGATAGAGGCA
GTCACCGGTTGGACCCGACCTTCCACTGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACT
CCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTT
ACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTTATGCGTCT
CGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAATTGGCAGCAGTGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAA
GAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGT
AGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAG
TTGGCCCAGTTGACAGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGCAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAA
GCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTCGTTCGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTGAAGACAGAATTATTATCTGAGGCTCAC
AGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGT
AGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAGCCAACGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGAT
TTCATTACAGGGTTGCCGAGGACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGATAGGCTTACCAAGTCAGCACACTTTGTTCCGGGTAAATCCACCTAT
ACTGCTAGTAAGTGGACACAGTTGTACATGTCCGAGATAGTGAGGTTGCATGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTC
TGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATTCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGAT
ATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCCTATAATAACAGCTATCAGGCTACCATCGGCATGGCA
CCCATTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKKKDGSMRLCIDYRELNKITVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRS
RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLSHVVSKAGVSVDPAKIEA
VTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYAS
RQLKSHEQNYPTHDLELAAVIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ
LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
RCLVCQQVKAPRQKPTGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKF
WKGLQTAMGTRLDFSTAFHSQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPI

Cmc06g0168641 (gene) of Melon (Charmono) v1.1 genome