CuGenDBv2

Gene ID	Cmc06g0168671
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr06:22634845..22637362
RNA-Seq Expression	Cmc06g0168671
Synteny	Cmc06g0168671
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.77

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQGNDPYLVEKR LAE GQAVEF LSSDGGLLFER LCVPSDSA KTELL EAHSSPFSMHP STKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPVGLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQSLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDK FLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.52

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAE GQAVEF LSSDGGLLFERRLCVPSDS VKTELL EAHSSPFSMHP STKMY+D+KR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKP GLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK FLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAE GQAVEF LSSDGGL FE RLCVPSDSAVKTELLFEAHSSPFSMHP STKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKP GLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DK FLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAE GQAVEF LSSDGGLLFERRLCVPSDSAVKTELL EAHSSPFSMHP STKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLL PLSIP+WKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK FLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0065935.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.15

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSK EFWLKQVSFLGHVVSKAGVSVD AKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLK+KLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHS ALITRQAPLHRDLERAEI V VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQGNDPYLVEKRGLAE GQAVEF LSSDGGLLFERRLCVPSDSAVKTELL EAHSSPFSMHP  TKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKP GLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FT+KFWKGLQTAMG RLDFSTAFHPQTDGQTERLNQVL+DMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC RSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK+LEFEVGDK FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL+TVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

96.77

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQGNDPYLVEKR LAE GQAVEF LSSDGGLLFER LCVPSDSA KTELL EAHSSPFSMHP STKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPVGLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQSLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDK FLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

96.52

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAE GQAVEF LSSDGGLLFERRLCVPSDS VKTELL EAHSSPFSMHP STKMY+D+KR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKP GLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK FLKVAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

96.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAE GQAVEF LSSDGGL FE RLCVPSDSAVKTELLFEAHSSPFSMHP STKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKP GLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DK FLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UP94 Pol protein

0.0e+00

96.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLT+KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKRGLAE GQAVEF LSSDGGLLFERRLCVPSDSAVKTELL EAHSSPFSMHP STKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLL PLSIP+WKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK FLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7VJN7 Reverse transcriptase

0.0e+00

96.15

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRS+YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSK EFWLKQVSFLGHVVSKAGVSVD AKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLT+KGAPFVWSKACEDSFQNLK+KLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHS ALITRQAPLHRDLERAEI V VGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS
        VQPTLRQRIIDAQGNDPYLVEKRGLAE GQAVEF LSSDGGLLFERRLCVPSDSAVKTELL EAHSSPFSMHP  TKMYQDLKR YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKP GLL PLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM
        FT+KFWKGLQTAMG RLDFSTAFHPQTDGQTERLNQVL+DMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC RSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLM

Query:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GP+LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK+LEFEVGDK FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSL+TVHDVFHV
Subjt:  GPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.9e-131

33.33

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP+I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L KK   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y  G AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR
            + Q+++    + +++    ND  L+    L    + VE  +    GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G L P+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD   +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

1.9e-131

33.33

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP+I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L KK   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y  G AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR
            + Q+++    + +++    ND  L+    L    + VE  +    GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G L P+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD   +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

1.9e-131

33.33

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP+I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L KK   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y  G AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR
            + Q+++    + +++    ND  L+    L    + VE  +    GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G L P+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD   +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

1.9e-131

33.33

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP+I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L KK   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y  G AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR
            + Q+++    + +++    ND  L+    L    + VE  +    GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G L P+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD   +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

1.9e-131

33.33

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP+I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  FR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L KK   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTKKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y  G AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR
            + Q+++    + +++    ND  L+    L    + VE  +    GLL   +  + +P+D+ +   ++ + H     +HP    +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDGGLLFERR--LCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G L P+   +  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL
        +   E+   S    +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD   +K     G L   +  KL+P F GPF +L++ GP  Y L L
Subjt:  VCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.1e-27

45.8

Show/hide

Query:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTKKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L KK +   W
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTKKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCTATGCATTGACTATAGAGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCATGATCGACGATCTATTTGACCAGTTGCAGGGAGCCACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAACATTTCGTTCCAAGTATGGACACTACGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATAC
TCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCAAAATGCGAGTTTTGGCTGAAGCAGGT
GTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCT
TTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAAGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCA
TGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGG
TTTGGGTTATGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGG
TTTTCGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGA
CAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCAAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTGTCACATTCAGC
AGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTCGAGCGGGCTGAGATTGCAGTGTTAGTGGGGGCAGTCACTATGCAGTTAGCCCAATTGACGGTACAGCCGA
CTTTGAGGCAAAGGATCATTGATGCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGTAGGGCAAGCGGTTGAGTTCTATTTATCCTCTGATGGT
GGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATTTGAGGCTCACAGTTCTCCATTTTCCATGCACCCAAGTAGTACGAA
GATGTATCAGGACCTGAAGCGGTTTTATTGGTGGCGTAACATGAAAAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGA
AACCAGTGGGTTTATTACACCCCTTGAGCATACCGGATTGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATT
TGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACA
TGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCC
ATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATG
GAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCA
GAGCTTGATGGGTCCTAAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACTGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGC
GGAAAGATCTCGAATTTGAGGTAGGGGACAAGACGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCTCGATTTGTTGGG
CCATTTGAGATTCTGGAACGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGCTGAGGAAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRLCIDYRELNKVTVKNRYPLPMIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIY
SKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTKKGAPFVWSKA
CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
QRRWLELVKDYDCEILYHQGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEVGQAVEFYLSSDG
GLLFERRLCVPSDSAVKTELLFEAHSSPFSMHPSSTKMYQDLKRFYWWRNMKREVAEFVSRCLVCQQVKAPRQKPVGLLHPLSIPDWKWENVSMDFITGLPRTLRGFTVI
WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM
EFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQSLMGPKLVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKTFLKVAPMRGVLRFERRGKLSPRFVG
PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

Cmc06g0168671 (gene) of Melon (Charmono) v1.1 genome