; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0169351 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0169351
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase
Genome locationCMiso1.1chr06:23802724..23804964
RNA-Seq ExpressionCmc06g0169351
SyntenyCmc06g0169351
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060377.1 integrase [Cucumis melo var. makuwa]0.0e+0096.81Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQA+ESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

TYJ95504.1 integrase [Cucumis melo var. makuwa]0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

TYJ98761.1 integrase [Cucumis melo var. makuwa]0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

TYK24556.1 integrase [Cucumis melo var. makuwa]0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

TYK30104.1 integrase [Cucumis melo var. makuwa]0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

TrEMBL top hitse value%identityAlignment
A0A5D3BJ80 Integrase0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

A0A5D3BQ81 Integrase0.0e+0096.81Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQA+ESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

A0A5D3CLV1 Integrase0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

A0A5D3DLN8 Integrase0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

A0A5D3E2J1 Integrase0.0e+0096.94Show/hide
Query:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
        MNMHKEQKK DEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTL+ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS
Subjt:  MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLS

Query:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
        IGQLLQRGLKVSFEGDICAIKDQA VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI
Subjt:  IGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCI

Query:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
        LAKHHRDSFPTGKAWRASKPLELIHT+LCGPMRTTTNGGN+YFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Subjt:  LAKHHRDSFPTGKAWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN

Query:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
        FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ
Subjt:  FFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQ

Query:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
        LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEA+SPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP
Subjt:  LRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISP

Query:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG
        RRMRSIQEIYN+TNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMEL TNKQALGVKWVYRTKLKS+GNVEKYKARLVVKG
Subjt:  RRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKG

Query:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
        YKQ+YGVDYEEIFAPVTRIETIRLILSLAAQNGWK YQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG
Subjt:  YKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTG

Query:  FQRCPYEHDSMSKKTSMANF
        F+RCPYEH    K+     F
Subjt:  FQRCPYEHDSMSKKTSMANF

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.6e-9030.22Show/hide
Query:  NMHKEQKK-----NDEGILFLACSVQDNVVEPT--WYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN-------
        N +KE +K        GI F+   V +  V     + LDSG S+H+  + S++          V+     ++ V  QG+ +  TK+G  R+ N       
Subjt:  NMHKEQKK-----NDEGILFLACSVQDNVVEPT--WYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN-------

Query:  -VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRG-
         V +      NL+S+ +L + G+ + F+     I  +  +++ K     N +  +NF   Q    ++  K+   LWH R+GH++   L  + + +M    
Subjt:  -VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRG-

Query:  --IQNINHETNICEVCILAKHHRDSFPTGK-AWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGY
          + N+     ICE C+  K  R  F   K      +PL ++H+++CGP+   T     YF+ F+D F+     Y +K KS+    F+ F A +E     
Subjt:  --IQNINHETNICEVCILAKHHRDSFPTGK-AWRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGY

Query:  KIKTLRSDRGGEYIA--FGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSV--PGMTPYEAWCG
        K+  L  D G EY++     F  ++GI + +T   TPQ NGV+ER  RTI E AR+M+    L   FWG+AV    Y++NR P++++     TPYE W  
Subjt:  KIKTLRSDRGGEYIA--FGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSV--PGMTPYEAWCG

Query:  EKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWN---------WNDDVDEARSPFHVN----I
        +KP + HLRVFG+  Y HI N+ +GK DDKS K I VGY  N   ++L++ V+ K I++RDV+  E    N         +  D  E+ +    N    I
Subjt:  EKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSEDESWN---------WNDDVDEARSPFHVN----I

Query:  DENEVAQELEQAE-IQAVESSSSSTSSSTSNDEIS------PRRMRSIQEIY--------------NSTNRINDDHF-----------------ANFALF
         + E   E ++ + IQ ++ S  S + +  ND         P   +    I                S  R  DDH                  A     
Subjt:  DENEVAQELEQAE-IQAVESSSSSTSSSTSNDEIS------PRRMRSIQEIY--------------NSTNRINDDHF-----------------ANFALF

Query:  AGVD-----------------------------------------------PVTFDE-AIQDEK--WKIAMDQEIDAIRRNETWELMELLTNKQALGVKW
         G+D                                               P +FDE   +D+K  W+ A++ E++A + N TW + +   NK  +  +W
Subjt:  AGVD-----------------------------------------------PVTFDE-AIQDEK--WKIAMDQEIDAIRRNETWELMELLTNKQALGVKW

Query:  VYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKA
        V+  K    GN  +YKARLV +G+ QKY +DYEE FAPV RI + R ILSL  Q   K +QMDVK+AFLNG LKEEI++  P G       + V KL KA
Subjt:  VYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKA

Query:  LYGLKQAPRAWYSRIDSF-----FLKTGFQRCPY
        +YGLKQA R W+   +       F+ +   RC Y
Subjt:  LYGLKQAPRAWYSRIDSF-----FLKTGFQRCPY

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.7e-11836.23Show/hide
Query:  EPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKG-TKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAS
        E  W +D+  S+H T  R +F          VK G+ +  ++ G GDI +KT  G T  + +V +VP L+ NL+S G  L R    S+  +      + S
Subjt:  EPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKG-TKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAS

Query:  VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIH
        ++IAK  +    ++  N    Q    ++  +    LWH R GH++ K L  L K  ++   +        C+ C+  K HR SF T    R    L+L++
Subjt:  VLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIH

Query:  TNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIA--FGNFFKEQGIHHQMTARMTPQQNGVA
        +++CGPM   + GGN+YF+TFIDD SRKLW+Y LK K +    F+ F A  E ++G K+K LRSD GGEY +  F  +    GI H+ T   TPQ NGVA
Subjt:  TNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIA--FGNFFKEQGIHHQMTARMTPQQNGVA

Query:  ERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKA
        ER NRTI+E  RSML+   LP  FWG+AV    Y++NR+P+  +    P   W  ++ S SHL+VFG  A++H+P + R KLDDKS  CI +GY +    
Subjt:  ERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKA

Query:  YRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEAR---------------SPFHVNIDENEVAQE-------LEQAE--IQAVESSSSSTSSSTSNDEI-
        YRL++PV +K+I SRDV+F E E     D  ++ +               +P       +EV+++       +EQ E   + VE     T     +  + 
Subjt:  YRLYNPVSRKIIISRDVIFSEDESWNWNDDVDEAR---------------SPFHVNIDENEVAQE-------LEQAE--IQAVESSSSSTSSSTSNDEI-

Query:  SPRRMRSIQEIYNSTN--RINDDHFANFALFAGVDPVTFDEAI-QDEKWKI--AMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYK
           R R     Y ST    I+DD           +P +  E +   EK ++  AM +E++++++N T++L+EL   K+ L  KWV++ K   +  + +YK
Subjt:  SPRRMRSIQEIYNSTN--RINDDHFANFALFAGVDPVTFDEAI-QDEKWKI--AMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYK

Query:  ARLVVKGYKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRID
        ARLVVKG++QK G+D++EIF+PV ++ +IR ILSLAA    +  Q+DVK+AFL+G L+EEI++ QP G+   G++  V KL K+LYGLKQAPR WY + D
Subjt:  ARLVVKGYKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRID

Query:  SF-----FLKTGFQRCPYEHDSMSKKTSMANFSSFLFTLMIYFLLEMI
        SF     +LKT    C Y             FS   F +++ ++ +M+
Subjt:  SF-----FLKTGFQRCPYEHDSMSKKTSMANFSSFLFTLMIYFLLEMI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.8e-8628.12Show/hide
Query:  WYLDSGCSNHMTGN-RSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQ-RGLKVSFEGDICAIKDQASVL
        W LDSG ++H+T +  ++ +    +   +V   D + + +   G   + TK     + N+ YVP +  NL+S+ +L    G+ V F      +KD  + +
Subjt:  WYLDSGCSNHMTGN-RSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQ-RGLKVSFEGDICAIKDQASVL

Query:  IAKVKMTANKMFPLNFTYGQ-ISCFSS-ILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIH
              T ++++       Q +S F+S   K     WH R GH     L+ +  N+ +  + N +H+   C  C++ K ++  F +     +++PLE I+
Subjt:  IAKVKMTANKMFPLNFTYGQ-ISCFSS-ILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIH

Query:  TNL-CGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTPQQNGVAE
        +++   P+ +  N   +Y++ F+D F+R  W+Y LK+KS+    F +FK   EN+   +I T  SD GGE++A   +F + GI H  +   TP+ NG++E
Subjt:  TNL-CGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTPQQNGVAE

Query:  RKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKAY
        RK+R I+E   ++L   ++P  +W  A A  VY++NR PT  +   +P++   G  P+   LRVFG   Y  +    + KLDDKS +C+ +GYS    AY
Subjt:  RKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKAY

Query:  RLYNPVSRKIIISRDVIFSE--------------------DESWNWND-----------DVDEARSPFHV-------------------NIDE-------
           +  + ++ ISR V F E                    + S  W+                   P H                    N+D        
Subjt:  RLYNPVSRKIIISRDVIFSE--------------------DESWNWND-----------DVDEARSPFHV-------------------NIDE-------

Query:  --------------------------------------NEVAQELEQAEIQAVESSSSS----TSSSTSNDEISPRRM-----RSIQEIYNSTNRI----
                                              NE   +L Q+     +SSSSS    TS+S+S+   +P  +       + +I N+ N+     
Subjt:  --------------------------------------NEVAQELEQAEIQAVESSSSS----TSSSTSNDEISPRRM-----RSIQEIYNSTNRI----

Query:  --------------NDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKGY
                      N  +    +L A  +P T  +A++DE+W+ AM  EI+A   N TW+L+    ++   +G +W++  K  S+G++ +YKARLV KGY
Subjt:  --------------NDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKGY

Query:  KQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGF
         Q+ G+DY E F+PV +  +IR++L +A    W   Q+DV +AFL G L ++++++QP G++ +     V KL+KALYGLKQAPRAWY  + ++ L  GF
Subjt:  KQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGF

Q99231 Transposon Ty1-DR3 Gag-Pol polyprotein6.4e-2823.16Show/hide
Query:  LDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQASVLIAKV
        LDSG S  +  +     +   +    V       + +   GD+    +  TK    V + P + ++LLS+ +L    +   F  ++    D  +VL   V
Subjt:  LDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQASVLIAKV

Query:  K------MTANKMFPLNF---TYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQN--------INHETNICEVCILAKHHRDSFPTGKA
        K      ++   + P N    T   +    S  K P    H    H N +++ Y  KN+ +             I+++   C +    KH        K 
Subjt:  K------MTANKMFPLNF---TYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQN--------INHETNICEVCILAKHHRDSFPTGKA

Query:  WRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSE--ALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI--AFGNFFKEQGIHHQ
          + +P + +HT++ GP+    N    YFI+F D+ ++  W+Y L ++ E   L  F +  AF +NQ    +  ++ DRG EY       F ++ GI   
Subjt:  WRASKPLELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSE--ALVCFKSFKAFTENQSGYKIKTLRSDRGGEYI--AFGNFFKEQGIHHQ

Query:  MTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNR-APTKSVPGMTPYEAWCGEKPSVSHLRVFGS--IAYSHIPNQLRGKLDD
         T     + +GVAER NRT+++  R+ L+   LPN  W  A+  +  + N  A  KS      +    G    +S L  FG   I   H PN    K+  
Subjt:  MTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNR-APTKSVPGMTPYEAWCGEKPSVSHLRVFGS--IAYSHIPNQLRGKLDD

Query:  KSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSED----------ESWNWNDDVDEARSPFHVNIDENEVAQ
        +      +  S NS  Y +Y P  +K + + + +  +           ++  +++D++   + +   I  NE+ Q
Subjt:  KSEKCIMVGYSENSKAYRLYNPVSRKIIISRDVIFSED----------ESWNWNDDVDEARSPFHVNIDENEVAQ

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.0e-8227.11Show/hide
Query:  WYLDSGCSNHMTGN-RSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRG-LKVSFEGDICAIKDQASVL
        W LDSG ++H+T +  ++      +   +V   D + + +   G   + T   +  +  V YVP +  NL+S+ +L     + V F      +KD  + +
Subjt:  WYLDSGCSNHMTGN-RSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRG-LKVSFEGDICAIKDQASVL

Query:  IAKVKMTANKMFPLNFTYGQ-ISCFSS-ILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIH
              T ++++       Q +S F+S   K     WH R GH +   L+ +  NH +  + N +H+   C  C + K H+  F +     +SKPLE I+
Subjt:  IAKVKMTANKMFPLNFTYGQ-ISCFSS-ILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIH

Query:  TNL-CGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTPQQNGVAE
        +++   P+ +  N   +Y++ F+D F+R  W+Y LK+KS+    F  FK+  EN+   +I TL SD GGE++   ++  + GI H  +   TP+ NG++E
Subjt:  TNL-CGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTPQQNGVAE

Query:  RKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKAY
        RK+R I+EM  ++L   ++P  +W  A +  VY++NR PT  +   +P++   G+ P+   L+VFG   Y  +    R KL+DKS++C  +GYS    AY
Subjt:  RKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKAY

Query:  RLYNPVSRKIIISRDVIFSE--------------------DESWNWNDDVDEARSPF----------HVNIDENEVAQELEQAEIQAVESS--SSSTSSS
           +  + ++  SR V F E                    D + NW        +P           H++      +        Q   S+  SSS SS 
Subjt:  RLYNPVSRKIIISRDVIFSE--------------------DESWNWNDDVDEARSPF----------HVNIDENEVAQELEQAEIQAVESS--SSSTSSS

Query:  TSNDEISP--------------RRMRSIQEIYNSTN----------------------------------------------------------------
        +S++  +P              +   S   I N+ N                                                                
Subjt:  TSNDEISP--------------RRMRSIQEIYNSTN----------------------------------------------------------------

Query:  ----------------RINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELLTNKQALGVKWVYRTKLKSNGNVEKYKARLV
                        + N  +    +L A  +P T  +A++D++W+ AM  EI+A   N TW+L+     +   +G +W++  K  S+G++ +YKARLV
Subjt:  ----------------RINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELM-ELLTNKQALGVKWVYRTKLKSNGNVEKYKARLV

Query:  VKGYKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFL
         KGY Q+ G+DY E F+PV +  +IR++L +A    W   Q+DV +AFL G L +E++++QP G+V +   + V +L+KA+YGLKQAPRAWY  + ++ L
Subjt:  VKGYKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFL

Query:  KTGF
          GF
Subjt:  KTGF

Arabidopsis top hitse value%identityAlignment
AT3G20980.1 Gag-Pol-related retrotransposon family protein3.0e-1235.61Show/hide
Query:  EPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVK--TGD---NTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDI-CAI
        E  W + S  SNHMT +   F TL+ S + +VK  +GD    T   V+G GD+   T +G K + NV YVPG++ N LS+ QL + G +VS E    C +
Subjt:  EPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVK--TGD---NTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDI-CAI

Query:  KDQASVLIAKVKMTANKMFPLNFTY--GQISC
         D+ +  +    M   + F L F+   G   C
Subjt:  KDQASVLIAKVKMTANKMFPLNFTY--GQISC

AT3G21000.1 Gag-Pol-related retrotransposon family protein1.0e-0930.97Show/hide
Query:  EQKKNDEGILFLACSVQDNVVEPT-----WYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKR-VTNVFYVPGLKHNLL
        +++K DE ++        N+   T     W +      +MT     F TL+ +F++ V T D T L V+G+GD+ ++ K+G K+ + NV +VPGL  N+L
Subjt:  EQKKNDEGILFLACSVQDNVVEPT-----WYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKR-VTNVFYVPGLKHNLL

Query:  SIGQLLQRGLKVS
        S G+++ +   +S
Subjt:  SIGQLLQRGLKVS

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.5e-3741.05Show/hide
Query:  DPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEEIFAPVTRIETIRLILSLAA
        +P T++EA +   W  AMD EI A+    TWE+  L  NK+ +G KWVY+ K  S+G +E+YKARLV KGY Q+ G+D+ E F+PV ++ +++LIL+++A
Subjt:  DPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEEIFAPVTRIETIRLILSLAA

Query:  QNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEE----EKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFQRCPYEHDSMSKKTS
           +  +Q+D+ +AFLNG L EEI++  P GY  R  +      V  LKK++YGLKQA R W+ +     +  GF +   +H    K T+
Subjt:  QNGWKFYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEE----EKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFQRCPYEHDSMSKKTS

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-1040Show/hide
Query:  NRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEK
        NRTI+E  RSML    LP  F  DA    V+I+N+ P+ ++    P E W    P+ S+LR FG +AY H      GKL  +++K
Subjt:  NRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEK

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.5e-1939.83Show/hide
Query:  NRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEEIF
        N++N  +          +P +   A++D  W  AM +E+DA+ RN+TW L+    N+  LG KWV++TKL S+G +++ KARLV KG+ Q+ G+ + E +
Subjt:  NRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEEIF

Query:  APVTRIETIRLILSLAAQ
        +PV R  TIR IL++A Q
Subjt:  APVTRIETIRLILSLAAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGCATAAAGAACAAAAGAAAAATGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAG
TAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGAGGAATCTTTCCAAAGTGAAGTGAAGACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATA
TTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAA
GTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCAGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCA
AATATCTTGCTTCAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGA
GAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGAAAAGCTTGGAGAGCCTCTAAACCT
CTCGAGTTGATTCATACAAATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCAATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTA
TTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACTTTGAGATCTGACCGTGGTGGAG
AATATATAGCTTTTGGTAATTTTTTCAAAGAGCAAGGAATTCATCATCAAATGACAGCTCGAATGACTCCACAGCAAAATGGAGTTGCAGAGAGAAAAAATAGAACAATC
ATGGAAATGGCGAGAAGTATGCTAAAAGCAAAAAATCTGCCAAACGAATTTTGGGGAGATGCTGTTGCATGTACTGTTTACATTCTAAATCGAGCTCCAACAAAGAGTGT
TCCAGGTATGACTCCTTATGAAGCATGGTGTGGTGAGAAACCATCTGTTAGTCATTTGAGAGTGTTTGGGAGTATAGCTTATTCTCATATTCCAAATCAGCTAAGAGGCA
AGCTTGATGATAAATCTGAAAAATGCATTATGGTAGGTTATAGTGAAAATTCTAAAGCTTATCGATTGTATAATCCTGTGTCAAGAAAAATTATTATCAGCAGAGATGTG
ATTTTTAGTGAAGATGAATCATGGAACTGGAATGACGACGTTGATGAAGCTAGAAGTCCATTTCATGTTAATATAGATGAAAATGAAGTTGCTCAAGAATTAGAGCAAGC
AGAAATTCAAGCGGTGGAGTCATCTTCGTCCTCAACGTCATCTTCCACAAGTAATGATGAAATCTCACCAAGGAGAATGAGGAGTATTCAAGAAATTTATAATTCCACTA
ATAGGATTAATGATGATCATTTTGCTAATTTTGCATTATTTGCTGGTGTTGATCCTGTAACTTTTGATGAAGCCATCCAAGATGAGAAATGGAAGATTGCAATGGATCAA
GAGATTGATGCGATAAGAAGAAATGAAACATGGGAGTTGATGGAGCTTCTGACAAACAAACAAGCTCTTGGAGTAAAATGGGTGTACAGAACAAAGTTGAAGTCAAATGG
TAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGAAATATGGTGTGGATTATGAAGAAATATTTGCCCCTGTGACAAGAATTGAGACCATTCGAT
TAATTTTGTCATTAGCTGCTCAAAATGGATGGAAATTTTATCAAATGGATGTAAAATCCGCTTTTTTGAATGGACACTTGAAGGAAGAGATATTTGTTGCACAACCTTTG
GGCTATGTGCAAAGGGGAGAAGAAGAAAAAGTGTACAAGTTGAAAAAAGCTTTGTATGGATTGAAGCAAGCTCCGCGAGCTTGGTACAGTCGTATCGACAGCTTTTTTCT
AAAGACAGGATTTCAAAGGTGTCCATATGAGCATGACTCTATGTCAAAGAAGACAAGTATGGCAAATTTCTCATCGTTTCTCTTTACGTTGATGATTTACTTTTTACTGG
AAATGATAAATTTTTGTGTGATGATTTTAAGAATTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATGCATAAAGAACAAAAGAAAAATGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAG
TAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGAGGAATCTTTCCAAAGTGAAGTGAAGACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATA
TTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAA
GTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCAGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCA
AATATCTTGCTTCAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGA
GAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGAAAAGCTTGGAGAGCCTCTAAACCT
CTCGAGTTGATTCATACAAATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCAATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTA
TTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACTTTGAGATCTGACCGTGGTGGAG
AATATATAGCTTTTGGTAATTTTTTCAAAGAGCAAGGAATTCATCATCAAATGACAGCTCGAATGACTCCACAGCAAAATGGAGTTGCAGAGAGAAAAAATAGAACAATC
ATGGAAATGGCGAGAAGTATGCTAAAAGCAAAAAATCTGCCAAACGAATTTTGGGGAGATGCTGTTGCATGTACTGTTTACATTCTAAATCGAGCTCCAACAAAGAGTGT
TCCAGGTATGACTCCTTATGAAGCATGGTGTGGTGAGAAACCATCTGTTAGTCATTTGAGAGTGTTTGGGAGTATAGCTTATTCTCATATTCCAAATCAGCTAAGAGGCA
AGCTTGATGATAAATCTGAAAAATGCATTATGGTAGGTTATAGTGAAAATTCTAAAGCTTATCGATTGTATAATCCTGTGTCAAGAAAAATTATTATCAGCAGAGATGTG
ATTTTTAGTGAAGATGAATCATGGAACTGGAATGACGACGTTGATGAAGCTAGAAGTCCATTTCATGTTAATATAGATGAAAATGAAGTTGCTCAAGAATTAGAGCAAGC
AGAAATTCAAGCGGTGGAGTCATCTTCGTCCTCAACGTCATCTTCCACAAGTAATGATGAAATCTCACCAAGGAGAATGAGGAGTATTCAAGAAATTTATAATTCCACTA
ATAGGATTAATGATGATCATTTTGCTAATTTTGCATTATTTGCTGGTGTTGATCCTGTAACTTTTGATGAAGCCATCCAAGATGAGAAATGGAAGATTGCAATGGATCAA
GAGATTGATGCGATAAGAAGAAATGAAACATGGGAGTTGATGGAGCTTCTGACAAACAAACAAGCTCTTGGAGTAAAATGGGTGTACAGAACAAAGTTGAAGTCAAATGG
TAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGAAATATGGTGTGGATTATGAAGAAATATTTGCCCCTGTGACAAGAATTGAGACCATTCGAT
TAATTTTGTCATTAGCTGCTCAAAATGGATGGAAATTTTATCAAATGGATGTAAAATCCGCTTTTTTGAATGGACACTTGAAGGAAGAGATATTTGTTGCACAACCTTTG
GGCTATGTGCAAAGGGGAGAAGAAGAAAAAGTGTACAAGTTGAAAAAAGCTTTGTATGGATTGAAGCAAGCTCCGCGAGCTTGGTACAGTCGTATCGACAGCTTTTTTCT
AAAGACAGGATTTCAAAGGTGTCCATATGAGCATGACTCTATGTCAAAGAAGACAAGTATGGCAAATTTCTCATCGTTTCTCTTTACGTTGATGATTTACTTTTTACTGG
AAATGATAAATTTTTGTGTGATGATTTTAAGAATTCCATGA
Protein sequenceShow/hide protein sequence
MNMHKEQKKNDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLEESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLK
VSFEGDICAIKDQASVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKP
LELIHTNLCGPMRTTTNGGNQYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTI
MEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGYSENSKAYRLYNPVSRKIIISRDV
IFSEDESWNWNDDVDEARSPFHVNIDENEVAQELEQAEIQAVESSSSSTSSSTSNDEISPRRMRSIQEIYNSTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQ
EIDAIRRNETWELMELLTNKQALGVKWVYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEEIFAPVTRIETIRLILSLAAQNGWKFYQMDVKSAFLNGHLKEEIFVAQPL
GYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFQRCPYEHDSMSKKTSMANFSSFLFTLMIYFLLEMINFCVMILRIP