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Cmc06g0169701 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0169701
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description1-deoxy-D-xylulose-5-phosphate synthase
Genome locationCMiso1.1chr06:24293037..24293830
RNA-Seq ExpressionCmc06g0169701
SyntenyCmc06g0169701
Gene Ontology termsGO:0009228 - thiamine biosynthetic process (biological process)
GO:0016114 - terpenoid biosynthetic process (biological process)
GO:0052865 - 1-deoxy-D-xylulose 5-phosphate biosynthetic process (biological process)
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALL29183.1 1-deoxy-D-xylulose-5-phosphatesynthase [Crataegus pinnatifida var. major]5.8e-0946.81Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK
        MAV    ++PN + FS   PP PK  N+S +Q L  +AS    D G+ R  R E+   K +    FSGEKP TP LD VSYP HMKNLS + L+
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK

RXH74115.1 hypothetical protein DVH24_021295 [Malus domestica]4.9e-0844.68Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK
        MAV   F++PN + FS   PP PK  N+S +Q L  +AS    D  + +  R E+   K +    FSGEKP TP LD V+YP HMKNLS + L+
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK

XP_008338474.2 probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Malus domestica]4.9e-0844.68Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK
        MAV   F++PN + FS   PP PK  N+S +Q L  +AS    D  + +  R E+   K +    FSGEKP TP LD V+YP HMKNLS + L+
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK

XP_008450191.1 PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis melo]1.2e-46100Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ
        MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ

XP_022136898.1 probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Momordica charantia]1.8e-1049.45Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ
        MAV  SFMKPN   F T +P  PK T+ S KQLL+ RA RN  D  E++ T S+E            GEKP+TP LD + YP+ +KNLSLQ
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ

TrEMBL top hitse value%identityAlignment
A0A0S1LLA9 1-deoxy-D-xylulose-5-phosphate synthase2.8e-0946.81Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK
        MAV    ++PN + FS   PP PK  N+S +Q L  +AS    D G+ R  R E+   K +    FSGEKP TP LD VSYP HMKNLS + L+
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK

A0A1S3BPP1 1-deoxy-D-xylulose-5-phosphate synthase5.8e-47100Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ
        MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ

A0A2P5AWN9 1-deoxy-D-xylulose-5-phosphate synthase4.1e-0844.68Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK
        MAV  SF+ PNHF     + P P   N S ++    RAS    D GE+   R E+ E K      +S EKP+TP LD V+YP+HMKNLS Q L+
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK

A0A498HX09 1-deoxy-D-xylulose-5-phosphate synthase2.4e-0844.68Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK
        MAV   F++PN + FS   PP PK  N+S +Q L  +AS    D  + +  R E+   K +    FSGEKP TP LD V+YP HMKNLS + L+
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLK

A0A6J1C8S7 1-deoxy-D-xylulose-5-phosphate synthase8.8e-1149.45Show/hide
Query:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ
        MAV  SFMKPN   F T +P  PK T+ S KQLL+ RA RN  D  E++ T S+E            GEKP+TP LD + YP+ +KNLSLQ
Subjt:  MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQ

SwissProt top hitse value%identityAlignment
Q6YU51 Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic7.7e-0465.52Show/hide
Query:  FSGEKPITPWLDKVSYPIHMKNLSLQVLK
        +SGEKP TP LD V+YP+HMKNLS   L+
Subjt:  FSGEKPITPWLDKVSYPIHMKNLSLQVLK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTGTTGGTCTTTCATGAAACCAAACCATTTTTGTTTTTCAACCAACCAACCTCCTTTCCCAAAATTTACTAATTATTCAACAAAGCAGTTGTTAATTTGTAG
GGCTTCAAGAAATGAAGTGGACCATGGAGAAAAAAGGAAGACGAGGAGTGAAGAAATTGAAAGAAAGACCAACAACAACAATGTTTTCTCAGGAGAAAAACCAATAACGC
CATGGTTGGACAAAGTTTCTTACCCAATTCACATGAAGAATCTATCACTTCAGGTACTAAAATTAGGGTATTTTATTTTATTATATTTTGTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
TTACTAAACAATATATTTCGATCAACAATAATGGCGGTTTGTTGGTCTTTCATGAAACCAAACCATTTTTGTTTTTCAACCAACCAACCTCCTTTCCCAAAATTTACTAA
TTATTCAACAAAGCAGTTGTTAATTTGTAGGGCTTCAAGAAATGAAGTGGACCATGGAGAAAAAAGGAAGACGAGGAGTGAAGAAATTGAAAGAAAGACCAACAACAACA
ATGTTTTCTCAGGAGAAAAACCAATAACGCCATGGTTGGACAAAGTTTCTTACCCAATTCACATGAAGAATCTATCACTTCAGGTACTAAAATTAGGGTATTTTATTTTA
TTATATTTTGTTTTCTAA
Protein sequenceShow/hide protein sequence
MAVCWSFMKPNHFCFSTNQPPFPKFTNYSTKQLLICRASRNEVDHGEKRKTRSEEIERKTNNNNVFSGEKPITPWLDKVSYPIHMKNLSLQVLKLGYFILLYFVF