| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-207 | 93.08 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-204 | 91.79 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDL FQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-207 | 93.08 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 7.2e-206 | 92.56 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPE FITQGQEQKVCKLN SIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 7.2e-206 | 92.31 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMV S MSYAQL SFWGYAVETA+HILNNVPSKSVS+ PFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 1.1e-204 | 91.79 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDL FQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| A0A5A7TZD0 Gag/pol protein | 6.4e-208 | 93.08 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| A0A5A7UYE8 Gag/pol protein | 6.4e-208 | 93.08 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| A0A5D3BUN8 Gag/pol protein | 3.5e-206 | 92.56 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMVRS MSYAQL SFWGYAVETA+HILNNVPSKSVSETPFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPE FITQGQEQKVCKLN SIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| A0A5D3CYF4 Gag/pol protein | 3.5e-206 | 92.31 | Show/hide |
Query: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
MDLRFQDYMI+HGIQSQLS PGTPQQNGV ERRNRT LDMV S MSYAQL SFWGYAVETA+HILNNVPSKSVS+ PFELWRGRKPSLSHFRI GC AH
Subjt: MDLRFQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVSETPFELWRGRKPSLSHFRILGCAAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMR+HKPRSKLVL+EATDESTRVV EVGP SRVDETTTSGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLNEATDESTRVVYEVGPLSRVDETTTSGQSHPSQSLRM
Query: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
PRRSGR+VSQPN YLGL ETQVVIPDDGVEDPLSYKQ MNDVDKDQ VKAMDLEMESMYFNSVWELVDLPEG PIGCKWIYKRK+DS GKVQTFKARLV
Subjt: PRRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--PIGCKWIYKRKKDSPGKVQTFKARLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
AKGYTQREGVDYEETFSPVAMLKSIRILLSIA FYDYE+WQMD KTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.2e-47 | 29.39 | Show/hide |
Query: QDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSV---SETPFELWRGRKPSLSHFRILGCAAHVL
+ + +K GI L+VP TPQ NGV ER RT + R+ +S A+L SFWG AV TA +++N +PS+++ S+TP+E+W +KP L H R+ G +V
Subjt: QDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSV---SETPFELWRGRKPSLSHFRILGCAAHVL
Query: VTNPK-KLEPRSRLCQFVGYPKETRGGLFFD-------------------------------------------PQENRVFVST----------NATFLE
+ N + K + +S FVGY E G +D P ++R + T N FL+
Subjt: VTNPK-KLEPRSRLCQFVGYPKETRGGLFFD-------------------------------------------PQENRVFVST----------NATFLE
Query: EDHMRDHK----PRSKLVLNEATDESTR----------------VVYEVGPLSRVDETTTS-GQSHPSQSLR-----------------------MPRRS
+ ++K K++ E +ES + E R D S G +P++S + RRS
Subjt: EDHMRDHK----PRSKLVLNEATDESTR----------------VVYEVGPLSRVDETTTS-GQSHPSQSLR-----------------------MPRRS
Query: GRIVSQP----NHYLGLIETQVVIPDDGVED-PLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEGP--IGCKWIYKRKKDSPGKVQTFKARL
R+ ++P N + V+ D P S+ ++ DK +A++ E+ + N+ W + PE + +W++ K + G +KARL
Subjt: GRIVSQP----NHYLGLIETQVVIPDDGVED-PLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEGP--IGCKWIYKRKKDSPGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR
VA+G+TQ+ +DYEETF+PVA + S R +LS+ Y+ +V QMD KTAFLN L+E I+M P+G VCKLN++IYGLKQA+R
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.8e-74 | 40.34 | Show/hide |
Query: FQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCA--AHV
F++Y HGI+ + +VPGTPQ NGV ER NRT ++ VRS + A+L SFWG AV+TA +++N PS ++ E P +W ++ S SH ++ GC AHV
Subjt: FQDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCA--AHV
Query: LVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLN--------------------EATDESTRVVYEVGPLS
KL+ +S C F+GY E G +DP + +V S + F E +R S+ V N TDE + + G +
Subjt: LVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVLN--------------------EATDESTRVVYEVGPLS
Query: RVDETTTSG---QSHPSQSLRMP---RRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--P
E G HP+Q RRS R + Y V+I DD +P S K+V++ +K+Q +KAM EMES+ N ++LV+LP+G P
Subjt: RVDETTTSG---QSHPSQSLRMP---RRSGRIVSQPNHYLGLIETQVVIPDDGVEDPLSYKQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEG--P
Query: IGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVC
+ CKW++K KKD K+ +KARLV KG+ Q++G+D++E FSPV + SIR +LS+AA D EV Q+D KTAFL+ +LEE I+M QPEGF G++ VC
Subjt: IGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVC
Query: KLNRSIYGLKQASR
KLN+S+YGLKQA R
Subjt: KLNRSIYGLKQASR
|
|
| P92520 Uncharacterized mitochondrial protein AtMg00820 | 8.8e-13 | 42.86 | Show/hide |
Query: KAMDLEMESMYFNSVWELVDLP--EGPIGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
+AM E++++ N W LV P + +GCKW++K K S G + KARLVAKG+ Q EG+ + ET+SPV +IR +L++A
Subjt: KAMDLEMESMYFNSVWELVDLP--EGPIGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.9e-44 | 26.03 | Show/hide |
Query: DYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCAAHVLVT-
+Y +HGI S P TP+ NG+ ER++R ++ + +S+A + ++W YA A++++N +P+ + E+PF+ G P+ R+ GCA + +
Subjt: DYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCAAHVLVT-
Query: -NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-----------DHMRDHKPRSKLVLNEATDESTRVVY-----------------
N KL+ +SR C F+GY L Q +R+++S + F E +++ + S V + T TR
Subjt: -NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-----------DHMRDHKPRSKLVLNEATDESTRVVY-----------------
Query: ----------------------------------EVGPLSRVDETTTSGQSHPS-----------------QSLRMPRRSGRIVSQPNHYLGLIETQVVI
+ GP T T Q+H S QSL P +S P T
Subjt: ----------------------------------EVGPLSRVDETTTSGQSHPS-----------------QSLRMPRRSGRIVSQPNHYLGLIETQVVI
Query: PDDGVEDPLSYKQVMND--------------------------------------------VDKDQCVKAMDLEMESMYFNSVWELVDLPEGP---IGCK
P + P Q++N+ + ++ AM E+ + N W+LV P +GC+
Subjt: PDDGVEDPLSYKQVMND--------------------------------------------VDKDQCVKAMDLEMESMYFNSVWELVDLPEGP---IGCK
Query: WIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNR
WI+ +K +S G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + + Q+D AFL L + ++MSQP GFI + + VCKL +
Subjt: WIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNR
Query: SIYGLKQASRS
++YGLKQA R+
Subjt: SIYGLKQASRS
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.3e-42 | 25.97 | Show/hide |
Query: QDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCAAHVLVT
+DY+ +HGI S P TP+ NG+ ER++R ++M + +S+A + ++W YA A++++N +P+ + ++PF+ G+ P+ ++ GCA + +
Subjt: QDYMIKHGIQSQLSVPGTPQQNGVLERRNRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCAAHVLVT
Query: --NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE---------------EDHMRDHKPR---------SKLV------LNEATDESTR
N KLE +S+ C F+GY L R++ S + F E ++ D P + LV L D S R
Subjt: --NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE---------------EDHMRDHKPR---------SKLV------LNEATDESTR
Query: VVYEVGPL------------SRVDETTTSGQSHPSQS--------------------LRMPRRSGRIVSQPNHYLGLIETQVVIP---------------
PL S + ++S + PS + L P + + PN L ++ + P
Subjt: VVYEVGPL------------SRVDETTTSGQSHPSQS--------------------LRMPRRSGRIVSQPNHYLGLIETQVVIP---------------
Query: -------------------------------------DDGVEDP---LSY----------KQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEGP--
DG+ P SY + + + D+ +AM E+ + N W+LV P
Subjt: -------------------------------------DDGVEDP---LSY----------KQVMNDVDKDQCVKAMDLEMESMYFNSVWELVDLPEGP--
Query: -IGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKV
+GC+WI+ +K +S G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + + Q+D AFL L + ++MSQP GF+ + + V
Subjt: -IGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFLNDNLEESIFMSQPEGFITQGQEQKV
Query: CKLNRSIYGLKQASRS
C+L ++IYGLKQA R+
Subjt: CKLNRSIYGLKQASRS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 6.4e-35 | 50.69 | Show/hide |
Query: AMDLEMESMYFNSVWELVDLP--EGPIGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFL
AMD E+ +M WE+ LP + PIGCKW+YK K +S G ++ +KARLVAKGYTQ+EG+D+ ETFSPV L S++++L+I+A Y++ + Q+D AFL
Subjt: AMDLEMESMYFNSVWELVDLP--EGPIGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIAAFYDYEVWQMDFKTAFL
Query: NDNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASR
N +L+E I+M P G+ QG VC L +SIYGLKQASR
Subjt: NDNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASR
|
|
| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.5e-07 | 35.37 | Show/hide |
Query: NRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCAAHVLVTNPKKLEPRSR
NRT ++ VRS + L +F A TA+HI+N PS +++ P E+W P+ S+ R GC A++ + KL+PR++
Subjt: NRTSLDMVRSKMSYAQLLCSFWGYAVETAIHILNNVPSKSVS-ETPFELWRGRKPSLSHFRILGCAAHVLVTNPKKLEPRSR
|
|
| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.2e-14 | 42.86 | Show/hide |
Query: KAMDLEMESMYFNSVWELVDLP--EGPIGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
+AM E++++ N W LV P + +GCKW++K K S G + KARLVAKG+ Q EG+ + ET+SPV +IR +L++A
Subjt: KAMDLEMESMYFNSVWELVDLP--EGPIGCKWIYKRKKDSPGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
|
|
