; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0169831 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0169831
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr06:24544960..24545649
RNA-Seq ExpressionCmc06g0169831
SyntenyCmc06g0169831
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]9.1e-11692.11Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMYAM+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLN G VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-11592.11Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMY M+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLN G VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

KAA0050437.1 gag/pol protein [Cucumis melo var. makuwa]7.7e-11591.23Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQ TYIDKMLVRYSMQNSKKGLL F+HGVHLSK+QC KTPQEV+DMRRI YAS VGSLMY M+ TRP+ICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYTD+DFQTDKDSRKSTSGSVFTLN GVVVWRSIKQGCIAD TM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]9.1e-11692.11Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMYAM+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLN G VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-11793.42Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMYAM+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLNEG VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

TrEMBL top hitse value%identityAlignment
A0A5A7TKM4 Gag/pol protein9.8e-11692.11Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMY M+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLN G VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

A0A5A7TZD0 Gag/pol protein4.4e-11692.11Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMYAM+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLN G VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

A0A5A7U7T0 Gag/pol protein3.7e-11591.23Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQ TYIDKMLVRYSMQNSKKGLL F+HGVHLSK+QC KTPQEV+DMRRI YAS VGSLMY M+ TRP+ICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYTD+DFQTDKDSRKSTSGSVFTLN GVVVWRSIKQGCIAD TM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

A0A5A7UYE8 Gag/pol protein4.4e-11692.11Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMYAM+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLN G VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

A0A5A7V1F5 Gag/pol protein1.4e-11793.42Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQNSKKGLL F+HGVHLSK+Q PKTPQEV+DMRRI YAS VGSLMYAM+ TRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        IVSRYQ NPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSGSVFTLNEG VVWRSIKQGCIADSTM+ EYVAACEAAKEA
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSG
        VWLRKFLHDLEVVPNMNLPITLYCDNSG
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSG

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.2e-2431.06Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVH---LSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICY
        M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M+N           ++   L+  +   TP            S +G LMY M+ TRPD+  
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVH---LSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICY

Query:  AVGIVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYG---AKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNE-GVVVWRSIKQGCIADSTMKVEYVAA
        AV I+SRY      + W  +K +L+YL+ T D  L++    A +  + GY D D+   +  RKST+G +F + +  ++ W + +Q  +A S+ + EY+A 
Subjt:  AVGIVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYG---AKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNE-GVVVWRSIKQGCIADSTMKVEYVAA

Query:  CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG
         EA +EA+WL+  L  + +   +  PI +Y DN G
Subjt:  CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG

P0CV72 Secreted RxLR effector protein 1617.0e-2646.62Show/hide
Query:  MRRISYASDVGSLMYAMVRTRPDICYAVGIVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVY-GAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGV
        M+ + Y S VG++MY MV TRPD+  AVG++S++  +P   HW  +K +L+YL+ T+ Y L +  A    L GY+D D+  D +SR+STSG +F LN G 
Subjt:  MRRISYASDVGSLMYAMVRTRPDICYAVGIVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVY-GAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGV

Query:  VVWRSIKQGCIADSTMKVEYVAACEAAKEAVWL
        V WRS KQ  +A S+ + EY+A  EA +EAVWL
Subjt:  VVWRSIKQGCIADSTMKVEYVAACEAAKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-5447.79Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K         + LSKK CP T +E  +M ++ Y+S VGSLMYAMV TRPDI +AVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA
        +VSR+  NPG +HW  VK IL+YLR T    L +G  D IL GYTD D   D D+RKS++G +FT + G + W+S  Q C+A ST + EY+AA E  KE 
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDN
        +WL++FL +L +         +YCD+
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDN

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.4e-1831.88Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        +KD  E  Y LGI+    R    L LSQ  YI  +L R +M  +K           LS     K     +      Y   VGSL Y +  TRPDI YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKE
         +S++   P  +H   +K IL+YL  T ++ + +     L L  Y+D D+  DKD   ST+G +  L    + W S KQ  +  S+ + EY +    + E
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSG
          W+   L +L +   +  P  +YCDN G
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.3e-2031Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        +K+  +  Y LGI+    R  + L LSQ  Y   +L R +M  +K           L+     K P   +      Y   VGSL Y +  TRPD+ YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKE
         +S+Y   P  DHW  +K +L+YL  T D+ + +     L L  Y+D D+  D D   ST+G +  L    + W S KQ  +  S+ + EY +    + E
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSG
          W+   L +L +   ++ P  +YCDN G
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.7e-2029.82Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG
        ++DLG  +Y LG++I R      + + Q  Y   +L    +   K   +     V  S         + K  RR+     +G LMY  + TR DI +AV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVG

Query:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAK-DLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKE
         +S++   P L H   V  IL Y++ T    L Y ++ ++ L  ++D  FQ+ KD+R+ST+G    L   ++ W+S KQ  ++ S+ + EY A   A  E
Subjt:  IVSRYQPNPGLDHWTTVKIILKYLRRTRDYMLVYGAK-DLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNS
         +WL +F  +L++   ++ P  L+CDN+
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNS

ATMG00810.1 DNA/RNA polymerases superfamily protein8.2e-1430.73Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSK--KGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYA
        MKDLG   Y LGIQI        L LSQ  Y +++L    M + K     L  K    +S  + P    +  D R I     VG+L Y +  TRPDI YA
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSK--KGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYA

Query:  VGIVSRYQPNPGLDHWTTVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAA
        V IV +    P L  +  +K +L+Y++ T  + + ++    L +  + D D+     +R+ST+G    L   ++ W + +Q  ++ S+ + EY A    A
Subjt:  VGIVSRYQPNPGLDHWTTVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAA

Query:  KEAVW
         E  W
Subjt:  KEAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATGTTGGT
TCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACTTTTCAAGCATGGGGTTCACTTGTCTAAGAAACAGTGTCCTAAGACACCTCAAGAAGTTAAGGATATGAGAC
GTATTTCCTATGCCTCAGATGTGGGCAGCTTAATGTATGCTATGGTCCGCACTAGGCCAGATATTTGTTATGCAGTGGGAATAGTTAGTAGGTATCAGCCCAACCCAGGG
TTAGACCATTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTA
TGATTTCCAAACTGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTCAATGAGGGAGTTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACT
CTACAATGAAGGTTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATC
ACTCTATATTGTGATAACAGTGGGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATGTTGGT
TCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACTTTTCAAGCATGGGGTTCACTTGTCTAAGAAACAGTGTCCTAAGACACCTCAAGAAGTTAAGGATATGAGAC
GTATTTCCTATGCCTCAGATGTGGGCAGCTTAATGTATGCTATGGTCCGCACTAGGCCAGATATTTGTTATGCAGTGGGAATAGTTAGTAGGTATCAGCCCAACCCAGGG
TTAGACCATTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTA
TGATTTCCAAACTGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTCAATGAGGGAGTTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACT
CTACAATGAAGGTTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATC
ACTCTATATTGTGATAACAGTGGGCAGTAG
Protein sequenceShow/hide protein sequence
MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLLFKHGVHLSKKQCPKTPQEVKDMRRISYASDVGSLMYAMVRTRPDICYAVGIVSRYQPNPG
LDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNEGVVVWRSIKQGCIADSTMKVEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPI
TLYCDNSGQ