; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0170061 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0170061
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:24905238..24906341
RNA-Seq ExpressionCmc06g0170061
SyntenyCmc06g0170061
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]9.6e-19294.07Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQ AFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

KAA0060483.1 reverse transcriptase [Cucumis melo var. makuwa]9.6e-20099.43Show/hide
Query:  NQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLA
        + VFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLA
Subjt:  NQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLA

Query:  NYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYESRKLNAAERKYTVFEK
        NYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYESRKLNAAERKYTVFEK
Subjt:  NYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYESRKLNAAERKYTVFEK

Query:  EMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLRGSEIGGSARDTSR
        EMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLRGSEIGGSARDTSR
Subjt:  EMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLRGSEIGGSARDTSR

Query:  EFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRLCSKSRELKEEIV
        EFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRLCSKSRELKEEIV
Subjt:  EFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRLCSKSRELKEEIV

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]9.6e-19294.07Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQ AFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]9.6e-19294.07Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQ AFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]3.3e-19294.35Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQAAFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

TrEMBL top hitse value%identityAlignment
A0A5A7UWX1 Reverse transcriptase4.6e-20099.43Show/hide
Query:  NQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLA
        + VFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLA
Subjt:  NQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLA

Query:  NYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYESRKLNAAERKYTVFEK
        NYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYESRKLNAAERKYTVFEK
Subjt:  NYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYESRKLNAAERKYTVFEK

Query:  EMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLRGSEIGGSARDTSR
        EMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLRGSEIGGSARDTSR
Subjt:  EMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLRGSEIGGSARDTSR

Query:  EFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRLCSKSRELKEEIV
        EFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRLCSKSRELKEEIV
Subjt:  EFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRLCSKSRELKEEIV

A0A5A7UXR6 Reverse transcriptase4.6e-19294.07Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQ AFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

A0A5D3BRZ6 Reverse transcriptase4.6e-19294.07Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQ AFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

A0A5D3C4R1 Reverse transcriptase4.6e-19294.07Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQ AFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

A0A5D3C9P8 Reverse transcriptase1.6e-19294.35Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGLTNAPATF TLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE
        AMPKS+SELRSFLGLANYYRRFV+ FSKRASPLTELLKKDVHWNWDP+CQAAFDGLKQA+MEGPLLGI DVTKPFEVETDASDYALGGVLLQNGH IAYE
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYE

Query:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
        SRKLNAAER+YTV EKEMLAVVHCLRAWRQYLLGSSFVVK DNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKKGSSNQAADALSRKQEHAAICLLA
Subjt:  SRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLA

Query:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL
        HL+GSEIGGS RDT REFLQKDHAAQNVMNL KA +TRQFWVEED LVTKGNRL
Subjt:  HLRGSEIGGSARDTSREFLQKDHAAQNVMNLVKACETRQFWVEEDFLVTKGNRL

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.67.4e-6243.1Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGL NAPATF   MN +    L+K  +VYLDDI+V+ST+++EH   L  VF+KL +  L ++ +KC F ++   FLGHV+    I     KI AI+ +
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWN-WDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAY
         +P    E+++FLGL  YYR+F+  F+  A P+T+ LKK++  +  +P+  +AF  LK  + E P+L + D TK F + TDASD ALG VL Q+GH ++Y
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWN-WDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAY

Query:  ESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR
         SR LN  E  Y+  EKE+LA+V   + +R YLLG  F +  D+      +      SK  RW+  L EFDF+ ++ KG  N  ADALSR
Subjt:  ESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR

P0CT34 Transposon Tf2-1 polyprotein9.7e-5439Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRD
        MP+G++ APA F   +N +  E  +  VV Y+DDI+++S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRD

Query:  WAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNG-----
        W  PK+  ELR FLG  NY R+F+ + S+   PL  LLKKDV W W P    A + +KQ ++  P+L   D +K   +ETDASD A+G VL Q       
Subjt:  WAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNG-----

Query:  HSIAYESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGS--SFVVKMDNSATCHFFT---QPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR
        + + Y S K++ A+  Y+V +KEMLA++  L+ WR YL  +   F +  D+       T   +P+   + ARWQ FL +F+FE  ++ GS+N  ADALSR
Subjt:  HSIAYESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGS--SFVVKMDNSATCHFFT---QPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR

P0CT35 Transposon Tf2-2 polyprotein9.7e-5439Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRD
        MP+G++ APA F   +N +  E  +  VV Y+DDI+++S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRD

Query:  WAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNG-----
        W  PK+  ELR FLG  NY R+F+ + S+   PL  LLKKDV W W P    A + +KQ ++  P+L   D +K   +ETDASD A+G VL Q       
Subjt:  WAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNG-----

Query:  HSIAYESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGS--SFVVKMDNSATCHFFT---QPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR
        + + Y S K++ A+  Y+V +KEMLA++  L+ WR YL  +   F +  D+       T   +P+   + ARWQ FL +F+FE  ++ GS+N  ADALSR
Subjt:  HSIAYESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGS--SFVVKMDNSATCHFFT---QPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR

P0CT41 Transposon Tf2-12 polyprotein9.7e-5439Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRD
        MP+G++ APA F   +N +  E  +  VV Y+DDI+++S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRD

Query:  WAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNG-----
        W  PK+  ELR FLG  NY R+F+ + S+   PL  LLKKDV W W P    A + +KQ ++  P+L   D +K   +ETDASD A+G VL Q       
Subjt:  WAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNG-----

Query:  HSIAYESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGS--SFVVKMDNSATCHFFT---QPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR
        + + Y S K++ A+  Y+V +KEMLA++  L+ WR YL  +   F +  D+       T   +P+   + ARWQ FL +F+FE  ++ GS+N  ADALSR
Subjt:  HSIAYESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGS--SFVVKMDNSATCHFFT---QPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR

P20825 Retrovirus-related Pol polyprotein from transposon 2979.4e-5740.34Show/hide
Query:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW
        MPFGL NAPATF   MN +    L+K  +VYLDDI+++ST++ EH + +Q VF KL +  L ++ +KC F ++  NFLGH++    I     K+ AI  +
Subjt:  MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW

Query:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDP-KCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAY
         +P    E+R+FLGL  YYR+F+  ++  A P+T  LKK    +    +   AF+ LK  ++  P+L + D  K F + TDAS+ ALG VL QNGH I++
Subjt:  AMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDP-KCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAY

Query:  ESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR
         SR LN  E  Y+  EKE+LA+V   + +R YLLG  F++  D+          +  +K  RW+  L E+ F+ ++ KG  N  ADALSR
Subjt:  ESRKLNAAERKYTVFEKEMLAVVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.6e-2241.22Show/hide
Query:  DHLQKVFQKLKENQLYVKREKCSFAQERINFLG--HVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWN
        +HL  V Q  +++Q Y  R+KC+F Q +I +LG  H+I    +  +  K+ A+  W  PK+ +ELR FLGL  YYRRFV+ + K   PLTELLKK+    
Subjt:  DHLQKVFQKLKENQLYVKREKCSFAQERINFLG--HVIECGRIGMEEGKIAAIRDWAMPKSISELRSFLGLANYYRRFVQRFSKRASPLTELLKKDVHWN

Query:  WDPKCQAAFDGLKQAMMEGPLLGITDVTKPF
        W      AF  LK A+   P+L + D+  PF
Subjt:  WDPKCQAAFDGLKQAMMEGPLLGITDVTKPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTATACGTTGATGAACCAGGTCTTCAACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGACATAGTGGT
CTATAGTACGACCATGGAGGAACATAGAGACCACCTACAAAAGGTTTTTCAAAAATTGAAAGAGAATCAGCTGTATGTTAAAAGAGAAAAATGCTCTTTTGCACAAGAGC
GGATAAATTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGCAATGCCAAAATCAATCTCGGAGTTACGC
TCCTTCCTTGGGTTGGCAAATTACTATCGTCGATTTGTCCAGAGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTGAAAAAAGACGTTCACTGGAATTGGGACCC
CAAGTGCCAAGCCGCCTTCGACGGCCTAAAACAAGCCATGATGGAGGGGCCACTTCTAGGGATTACGGATGTGACCAAACCTTTCGAAGTGGAGACAGATGCGTCTGATT
ATGCATTGGGGGGTGTGCTCCTACAGAATGGGCACTCGATTGCATACGAAAGTCGAAAATTGAATGCAGCCGAAAGGAAGTATACTGTGTTTGAAAAAGAAATGCTCGCA
GTAGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGTCGTTTGTAGTGAAGATGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTC
GAAACAAGCAAGATGGCAGGAATTTCTGGTCGAGTTCGACTTCGAATTTGAACACAAGAAGGGGTCGAGCAACCAGGCTGCCGATGCCCTAAGTCGAAAACAAGAACATG
CTGCCATATGCCTATTAGCTCACCTCCGGGGGAGCGAGATTGGCGGGTCGGCTAGAGACACCTCGAGAGAGTTTCTACAGAAGGATCATGCTGCTCAGAACGTCATGAAT
TTAGTGAAGGCATGCGAAACACGACAGTTTTGGGTCGAGGAAGACTTTTTAGTCACAAAGGGCAATCGACTATGTTCCAAGAGCAGGGAACTTAAGGAAGAAATTGTTGT
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTATACGTTGATGAACCAGGTCTTCAACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGACATAGTGGT
CTATAGTACGACCATGGAGGAACATAGAGACCACCTACAAAAGGTTTTTCAAAAATTGAAAGAGAATCAGCTGTATGTTAAAAGAGAAAAATGCTCTTTTGCACAAGAGC
GGATAAATTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGCAATGCCAAAATCAATCTCGGAGTTACGC
TCCTTCCTTGGGTTGGCAAATTACTATCGTCGATTTGTCCAGAGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTGAAAAAAGACGTTCACTGGAATTGGGACCC
CAAGTGCCAAGCCGCCTTCGACGGCCTAAAACAAGCCATGATGGAGGGGCCACTTCTAGGGATTACGGATGTGACCAAACCTTTCGAAGTGGAGACAGATGCGTCTGATT
ATGCATTGGGGGGTGTGCTCCTACAGAATGGGCACTCGATTGCATACGAAAGTCGAAAATTGAATGCAGCCGAAAGGAAGTATACTGTGTTTGAAAAAGAAATGCTCGCA
GTAGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGTCGTTTGTAGTGAAGATGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTC
GAAACAAGCAAGATGGCAGGAATTTCTGGTCGAGTTCGACTTCGAATTTGAACACAAGAAGGGGTCGAGCAACCAGGCTGCCGATGCCCTAAGTCGAAAACAAGAACATG
CTGCCATATGCCTATTAGCTCACCTCCGGGGGAGCGAGATTGGCGGGTCGGCTAGAGACACCTCGAGAGAGTTTCTACAGAAGGATCATGCTGCTCAGAACGTCATGAAT
TTAGTGAAGGCATGCGAAACACGACAGTTTTGGGTCGAGGAAGACTTTTTAGTCACAAAGGGCAATCGACTATGTTCCAAGAGCAGGGAACTTAAGGAAGAAATTGTTGT
ATGA
Protein sequenceShow/hide protein sequence
MPFGLTNAPATFYTLMNQVFNEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSISELR
SFLGLANYYRRFVQRFSKRASPLTELLKKDVHWNWDPKCQAAFDGLKQAMMEGPLLGITDVTKPFEVETDASDYALGGVLLQNGHSIAYESRKLNAAERKYTVFEKEMLA
VVHCLRAWRQYLLGSSFVVKMDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKKGSSNQAADALSRKQEHAAICLLAHLRGSEIGGSARDTSREFLQKDHAAQNVMN
LVKACETRQFWVEEDFLVTKGNRLCSKSRELKEEIVV