; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0170281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0170281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr06:25473801..25474703
RNA-Seq ExpressionCmc06g0170281
SyntenyCmc06g0170281
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-15391.33Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKI+LKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]6.1e-15290.67Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGE QYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKIILKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTS SVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWL+KFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]5.0e-15492Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMYV LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKIILKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-15391.33Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKI+LKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-15492Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+TVKIILKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LNEGAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF K LTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein2.9e-15290.67Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGE QYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKIILKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTS SVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWL+KFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

A0A5A7TKM4 Gag/pol protein2.4e-15492Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMYV LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKIILKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

A0A5A7TZD0 Gag/pol protein9.1e-15491.33Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKI+LKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

A0A5A7UYE8 Gag/pol protein9.1e-15491.33Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+ VKI+LKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LN GAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF KTLTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

A0A5A7V1F5 Gag/pol protein1.4e-15492Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSMQ+SKKGLLPFR+GV+LSKEQ PKTPQEVEDMRR PYAS VG+LMY  LCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHW+TVKIILKYLRRTRDYMLVYGAK+LILTGYT SDFQTDKDSRKSTSGSVF LNEGAVV RSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG   NSKEPR+HKRGK I+RKYHLIREIVQRGDVIVTKIASEHNIADPF K LTAKVF+GHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR

SwissProt top hitse value%identityAlignment
P04146 Copia protein8.5e-4035.31Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLP----FRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDIC
        M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M++      P      Y +  S E C            TP  S++G LMY+ LCTRPD+ 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLP----FRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDIC

Query:  YAVGIVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLI----LTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIK-QGCIADSTMEAEYV
         AV I+SRY S    + W  +K +L+YL+ T D  L++  KNL     + GY  SD+   +  RKST+G +F + +  ++  + K Q  +A S+ EAEY+
Subjt:  YAVGIVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLI----LTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIK-QGCIADSTMEAEYV

Query:  AACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLES
        A  EA +EA+WL+  L  + +   +  PI +Y DN G    +  P  HKR K I  KYH  RE VQ   + +  I +E+ +AD F K L A  F    + 
Subjt:  AACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLES

Query:  LGL
        LGL
Subjt:  LGL

P0CV72 Secreted RxLR effector protein 1611.0e-2445.86Show/hide
Query:  MRRTPYASVVGNLMYVTLCTRPDICYAVGIVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVY-GAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGA
        M+  PY S VG +MY+ + TRPD+  AVG++S++ S+P   HW  +K +L+YL+ T+ Y L +  A    L GY+ +D+  D +SR+STSG +F LN G 
Subjt:  MRRTPYASVVGNLMYVTLCTRPDICYAVGIVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVY-GAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGA

Query:  VVSRSIKQGCIADSTMEAEYVAACEAAKEAVWL
        V  RS KQ  +A S+ E EY+A  EA +EAVWL
Subjt:  VVSRSIKQGCIADSTMEAEYVAACEAAKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-6142.86Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+++K    P    + LSK+ CP T +E  +M + PY+S VG+LMY  +CTRPDI +AVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA
        +VSR+  NPG +HW  VK IL+YLR T    L +G  + IL GYT +D   D D+RKS++G +F  + GA+  +S  Q C+A ST EAEY+AA E  KE 
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGL
        +WL++FL +L +         +YCD+      SK    H R K I  +YH IRE+V    + V KI++  N AD   K +    F+   E +G+
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.3e-2831.53Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        +KD  E  Y LGI+    R    L LSQ  YI  +L R +M  +K    P      LS     K     E      Y  +VG+L Y+   TRPDI YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDY-MLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKE
         +S++   P  +H   +K IL+YL  T ++ + +     L L  Y+ +D+  DKD   ST+G +  L    +   S KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDY-MLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGL
          W+   L +L +   +  P  +YCDN G       P  H R K I   YH IR  VQ G + V  +++   +AD   K L+   F+     +G+
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.1e-3030.85Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        +K+  +  Y LGI+    R  + L LSQ  Y   +L R +M  +K    P      L+     K P   E      Y  +VG+L Y+   TRPD+ YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDY-MLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKE
         +S+Y   P  DHW+ +K +L+YL  T D+ + +     L L  Y+ +D+  D D   ST+G +  L    +   S KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDY-MLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGL
          W+   L +L +   ++ P  +YCDN G       P  H R K I   YH IR  VQ G + V  +++   +AD   K L+   F+     +G+
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.8e-2229.41Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG
        ++DLG  +Y LG++I R      + + Q  Y   +L    +   K   +P    V  S      +  +  D +   Y  ++G LMY+ + TR DI +AV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAK-NLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKE
         +S++   P L H   V  IL Y++ T    L Y ++  + L  ++ + FQ+ KD+R+ST+G    L    +  +S KQ  ++ S+ EAEY A   A  E
Subjt:  IVSRYQSNPGLDHWSTVKIILKYLRRTRDYMLVYGAK-NLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIRE
         +WL +F  +L++   ++ P  L+CDN+     +     H+R K I+   H +RE
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIRE

ATMG00810.1 DNA/RNA polymerases superfamily protein1.7e-1430.73Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSK--KGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYA
        MKDLG   Y LGIQI        L LSQ  Y +++L    M   K     LP +    +S  + P           + + S+VG L Y+TL TRPDI YA
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSK--KGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYA

Query:  VGIVSRYQSNPGLDHWSTVKIILKYLRRTRDY-MLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAA
        V IV +    P L  +  +K +L+Y++ T  + + ++    L +  +  SD+     +R+ST+G    L    +   + +Q  ++ S+ E EY A    A
Subjt:  VGIVSRYQSNPGLDHWSTVKIILKYLRRTRDY-MLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAA

Query:  KEAVW
         E  W
Subjt:  KEAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATG
TTGGTTCGATATTCGATGCAGCACTCTAAGAAGGGTTTATTACCTTTCAGGTATGGGGTTTACTTGTCTAAGGAACAATGTCCTAAGACACCCCAAGAAGTTGAG
GATATGAGACGTACTCCCTATGCCTCAGTTGTGGGCAACTTAATGTATGTTACGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTAT
CAGTCCAACCCAGGATTAGACCACTGGTCGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGAATTTGATC
CTTACAGGATACACTGGCTCTGATTTCCAAACCGATAAGGATTCTAGAAAATCTACGTCGGGATCAGTGTTCATCCTAAATGAGGGAGCTGTAGTATCGCGTAGC
ATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTG
GAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGACAGCACCCAATTCTAAAGAACCTCGGAACCATAAACGAGGGAAACAGATA
AAGAGGAAGTATCACCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTTACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTATGAAGACTCTC
ACGGCTAAAGTGTTTAAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATG
TTGGTTCGATATTCGATGCAGCACTCTAAGAAGGGTTTATTACCTTTCAGGTATGGGGTTTACTTGTCTAAGGAACAATGTCCTAAGACACCCCAAGAAGTTGAG
GATATGAGACGTACTCCCTATGCCTCAGTTGTGGGCAACTTAATGTATGTTACGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTAT
CAGTCCAACCCAGGATTAGACCACTGGTCGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGAATTTGATC
CTTACAGGATACACTGGCTCTGATTTCCAAACCGATAAGGATTCTAGAAAATCTACGTCGGGATCAGTGTTCATCCTAAATGAGGGAGCTGTAGTATCGCGTAGC
ATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTG
GAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGACAGCACCCAATTCTAAAGAACCTCGGAACCATAAACGAGGGAAACAGATA
AAGAGGAAGTATCACCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTTACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTATGAAGACTCTC
ACGGCTAAAGTGTTTAAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA
Protein sequenceShow/hide protein sequence
MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQHSKKGLLPFRYGVYLSKEQCPKTPQEVEDMRRTPYASVVGNLMYVTLCTRPDICYAVGIVSRY
QSNPGLDHWSTVKIILKYLRRTRDYMLVYGAKNLILTGYTGSDFQTDKDSRKSTSGSVFILNEGAVVSRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDL
EVVPNMNLPITLYCDNSGTAPNSKEPRNHKRGKQIKRKYHLIREIVQRGDVIVTKIASEHNIADPFMKTLTAKVFKGHLESLGLRDMYIR