; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0175221 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0175221
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr06:32158756..32160318
RNA-Seq ExpressionCmc06g0175221
SyntenyCmc06g0175221
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040699.1 pol protein [Cucumis melo var. makuwa]7.7e-29696.92Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQ  +FSLSSDGGLLFERRLCVP D AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVSRCLVCQQVKAPRQKPAGLLQPLSIP+WK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFE+GDKVFLKVAPM+GVLRFERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRKYVPDPSHVVDYEPLEIDENLSY 
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNKEIP
Subjt:  EQPVEVLAREVKTLRNKEIP

KAA0043669.1 pol protein [Cucumis melo var. makuwa]1.6e-29697.5Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD+ERAEI VSVGAVT QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQTA+FSLSSDGGLLFERRLCVPSD AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFE+GDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        E+PVEVLAREVKTLRNK+IP
Subjt:  EQPVEVLAREVKTLRNKEIP

KAA0047043.1 pol protein [Cucumis melo var. makuwa]2.2e-29597.12Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVT+QLA LTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQ  +FSLSSDGGLLFERRLCVPSD AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS NEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRR DLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENL Y 
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNKEIP
Subjt:  EQPVEVLAREVKTLRNKEIP

KAA0051368.1 pol protein [Cucumis melo var. makuwa]5.2e-30098.65Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQTA+FSLSSDGGLLFERRLCVPSD AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNK+IP
Subjt:  EQPVEVLAREVKTLRNKEIP

KAA0057672.1 pol protein [Cucumis melo var. makuwa]2.2e-29596.35Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQ  +FSLSSDGGLLFERRLCVPSD AVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PLEIDENLSY+
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNKEIP
Subjt:  EQPVEVLAREVKTLRNKEIP

TrEMBL top hitse value%identityAlignment
A0A5A7THF3 Reverse transcriptase3.7e-29696.92Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQ  +FSLSSDGGLLFERRLCVP D AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVSRCLVCQQVKAPRQKPAGLLQPLSIP+WK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFE+GDKVFLKVAPM+GVLRFERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRKYVPDPSHVVDYEPLEIDENLSY 
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNKEIP
Subjt:  EQPVEVLAREVKTLRNKEIP

A0A5A7TR61 Pol protein7.5e-29797.5Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD+ERAEI VSVGAVT QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQTA+FSLSSDGGLLFERRLCVPSD AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFE+GDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        E+PVEVLAREVKTLRNK+IP
Subjt:  EQPVEVLAREVKTLRNKEIP

A0A5A7U7V9 Reverse transcriptase2.5e-30098.65Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQTA+FSLSSDGGLLFERRLCVPSD AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNK+IP
Subjt:  EQPVEVLAREVKTLRNKEIP

A0A5A7UAA8 Reverse transcriptase1.1e-29597.5Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQ  +FSLSSDGGL FE RLCVPSD AVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ D
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFEI DKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNKEIP
Subjt:  EQPVEVLAREVKTLRNKEIP

A0A5A7UP94 Pol protein1.1e-29596.35Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK
        GQ  +FSLSSDGGLLFERRLCVPSD AVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWK
Subjt:  GQTAKFSLSSDGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
        WENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVP KSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD

Query:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS
        GQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKS
Subjt:  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKS

Query:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV
        YADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PLEIDENLSY+
Subjt:  YADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV

Query:  EQPVEVLAREVKTLRNKEIP
        EQPVEVLAREVKTLRNKEIP
Subjt:  EQPVEVLAREVKTLRNKEIP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.8e-6431.33Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW
        +  + ++    GLL   +  + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E 
Subjt:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT
         WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT

Query:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ
        DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + 
Subjt:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ

Query:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein3.8e-6431.33Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW
        +  + ++    GLL   +  + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E 
Subjt:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT
         WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT

Query:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ
        DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + 
Subjt:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ

Query:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein3.8e-6431.33Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW
        +  + ++    GLL   +  + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E 
Subjt:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT
         WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT

Query:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ
        DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + 
Subjt:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ

Query:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein3.8e-6431.33Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW
        +  + ++    GLL   +  + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E 
Subjt:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT
         WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT

Query:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ
        DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + 
Subjt:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ

Query:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Q9UR07 Transposon Tf2-11 polyprotein3.8e-6431.33Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW
        +  + ++    GLL   +  + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E 
Subjt:  QTAKFSLSSDGGLLFERR--LCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT
         WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT

Query:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ
        DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + 
Subjt:  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQ

Query:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  KSYADVRRKDL-EFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACA
TTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTAC
AGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTAAGTTCTCGTTATCCTCT
GATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATTGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAG
TACGAAGATGTATCAGGACCTGAAGCGAGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGCCAGCAGGTTAAGGCACCAA
GGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACA
GTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGAGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAG
GTTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGG
CTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACAT
TTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGG
TGAGCAGAGATTGATGGGCCCTGAGTTAGTTCAGTCTACTAACGAAGCGGTACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATG
TGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAATTGAGTCCCCGTTTT
GTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAA
GTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATGTTGAGCAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGT
TGAGAAATAAAGAAATTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACA
TTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTAC
AGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTAAGTTCTCGTTATCCTCT
GATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATTGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAG
TACGAAGATGTATCAGGACCTGAAGCGAGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGCCAGCAGGTTAAGGCACCAA
GGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACA
GTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGAGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAG
GTTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGG
CTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACAT
TTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGG
TGAGCAGAGATTGATGGGCCCTGAGTTAGTTCAGTCTACTAACGAAGCGGTACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATG
TGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAATTGAGTCCCCGTTTT
GTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAA
GTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATGTTGAGCAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGT
TGAGAAATAAAGAAATTCCCTAG
Protein sequenceShow/hide protein sequence
MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAKFSLSS
DGGLLFERRLCVPSDCAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFT
VIWVVVDRLTKSAHFVPSKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRF
VGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIP