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Cmc06g0175401 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0175401
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionYTH domain-containing protein
Genome locationCMiso1.1chr06:32338573..32341247
RNA-Seq ExpressionCmc06g0175401
SyntenyCmc06g0175401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7390606.1 unnamed protein product [Spirodela intermedia]8.2e-0849.4Show/hide
Query:  TKLVKPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKV
        TK     S+VLAPTV I G +  T PG GP+FPA + TT P S A  AP    S K+  G+PP E E TSTPS +A+S  A++
Subjt:  TKLVKPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKV

EXB78387.1 hypothetical protein L484_003249 [Morus notabilis]5.7e-0946.15Show/hide
Query:  ITKLVKPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLG----SPPTEIEITSTPSSIAASKAAKVFGSIHS-LASSG
        +T++ K  S +LAPTV+IHGD F TV G+GP FPA  TT  P +TAWNAPT  A L ++ G    S   E + TSTPS    S A  +    H+   ++ 
Subjt:  ITKLVKPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLG----SPPTEIEITSTPSSIAASKAAKVFGSIHS-LASSG

Query:  QQTL
        QQTL
Subjt:  QQTL

KAF4403978.1 hypothetical protein G4B88_014434 [Cannabis sativa]7.5e-0955Show/hide
Query:  VVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKVFGSIH
        +VLAPTVRI G + D V   GP FPAE+ T IP   A N P    SLK+ +GS P EIE TSTPSS AAS+ AK     H
Subjt:  VVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKVFGSIH

KAG5613519.1 hypothetical protein H5410_024800 [Solanum commersonii]4.0e-1055.7Show/hide
Query:  KPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSP---PTEIEITSTPSSIAASKA
        K  S+V+A TVRI G T  TV G GP FPAE+ T IP STAWNAP    SL+NS   P   P++ + TSTPS+IA+S A
Subjt:  KPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSP---PTEIEITSTPSSIAASKA

KHG16057.1 hypothetical protein F383_20744 [Gossypium arboreum]8.2e-0857.53Show/hide
Query:  VVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAA
        +VLAPTVR HG +FD V   GP FPAE+ T IP   A N P    S K    S P E E TSTPSSIAAS AA
Subjt:  VVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAA

TrEMBL top hitse value%identityAlignment
A0A0A9EXJ6 Uncharacterized protein3.1e-0851.32Show/hide
Query:  SVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKV
        S V APTV IHG  F    G GP+FPAE  TT+PR  A +APT   S ++    PP+E E TSTPSS+A S  A++
Subjt:  SVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKV

A0A0A9VGG3 Uncharacterized protein9.5e-1050Show/hide
Query:  LSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKVFGSIHSLASSGQQ
        +S+VLAPTV  HG  FDTVP  G  FP E+TT     TAW     + SLK S    P E+E T TPS +AAS AA +  S HSL  +G+Q
Subjt:  LSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKVFGSIHSLASSGQQ

A0A3Q7GC38 Uncharacterized protein1.9e-1055.7Show/hide
Query:  KPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSP---PTEIEITSTPSSIAASKA
        K  S+V+A TVRI G T  TV G GP FPAE+ T IP STAWNAP    SL+NS   P   P++ + TSTPS+IA+S A
Subjt:  KPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSP---PTEIEITSTPSSIAASKA

A0A7J6IAA8 Uncharacterized protein3.6e-0955Show/hide
Query:  VVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKVFGSIH
        +VLAPTVRI G + D V   GP FPAE+ T IP   A N P    SLK+ +GS P EIE TSTPSS AAS+ AK     H
Subjt:  VVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKVFGSIH

W9RKF2 Uncharacterized protein2.8e-0946.15Show/hide
Query:  ITKLVKPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLG----SPPTEIEITSTPSSIAASKAAKVFGSIHS-LASSG
        +T++ K  S +LAPTV+IHGD F TV G+GP FPA  TT  P +TAWNAPT  A L ++ G    S   E + TSTPS    S A  +    H+   ++ 
Subjt:  ITKLVKPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLG----SPPTEIEITSTPSSIAASKAAKVFGSIHS-LASSG

Query:  QQTL
        QQTL
Subjt:  QQTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTCGGGGATCACAAAATTGGTGAAACCTCTATCAGTAGTACTAGCTCCAACAGTTAGGATCCATGGCGACACATTTGATACAGTCCCAGGAGTTGGTCCCATGTT
CCCAGCGGAAGAAACAACAACAATACCTCGCTCAACTGCATGGAATGCTCCTACAGAGAGTGCATCACTAAAGAACTCTTTGGGCTCTCCACCAACAGAAATCGAGATAA
CATCAACGCCATCGTCAATTGCAGCTTCAAAGGCAGCTAAGGTATTTGGGTCCATACACTCATTGGCTTCGTCTGGCCAACAAACCTTATAG
mRNA sequenceShow/hide mRNA sequence
AAGTTCTATTCATTCTCCTAAATTCACAACAATTGAGCTCCTAACATGGTGATTGAAATCAGTCCATACTAATTCCCCAAACACATAACCTTCTTGCTTTCCCTTTCCGC
TTCTTTTTAACAACACCTTGAAGCTTTTCTCTTCATCCATAGCTGTAAATTCCAATATTCTTGGCTCAACAATGATTGAAACTTCCAATGGCGTCTTCACTCTAGCAACA
TACCTCCCTGGACTTCCCACATTCTTCAATTTTCTATTGATCGCCACAGGACCCATTTTCAGATTTGTAACTGAGATCGATGGATTTAATGGCCGCTGGACTCCATTTGG
GGTTTAGGGTTTTGAGAAGGCCTACAATGCCAGCAACATGGGGGCAGGCCATGGATGTGCCAGAATCTACTTTAAAAGGAGATTGACGATCGTCCAATGGTGCTTCTGTC
AATGGTATGCCGTCGGGGATCACAAAATTGGTGAAACCTCTATCAGTAGTACTAGCTCCAACAGTTAGGATCCATGGCGACACATTTGATACAGTCCCAGGAGTTGGTCC
CATGTTCCCAGCGGAAGAAACAACAACAATACCTCGCTCAACTGCATGGAATGCTCCTACAGAGAGTGCATCACTAAAGAACTCTTTGGGCTCTCCACCAACAGAAATCG
AGATAACATCAACGCCATCGTCAATTGCAGCTTCAAAGGCAGCTAAGGTATTTGGGTCCATACACTCATTGGCTTCGTCTGGCCAACAAACCTTATAGGACGCAACACGG
GCTCTAGGGGAGCCACCTTTGACCGTACCATTGCCCAATCCCAAAACATTAGCTCCAGGGACAAAATTGCCACCAGCTATTGACAAAGTGTGGGTTCCATGTCCTACATT
GTCTCTTGAAGAATTGAAGGTATCAGCAAGTTCACCATAGCCTATGTTGAAGAATCTTGCTCCAATCAATTTTCTGCATTTAATGTAGCCATTTTTGAATTTGCTACTTA
TAATAGAAAGAGAAGAAGAAAAAAAACTGAGATAGGACATGAATCTCTTGACCTATTACAACGGAACTTGGGGTCGGCATCACTTTGACAAGTTCCCATCCACCTTGATG
GGATAGGTCCATACCCTTCATCACTAAAGCTTTTAGATTCTGGCCAAACGCCTATGATCTCATTTACATGAACAGTGTTAGGGGCGTTTGTTCTTCGAAAGTGCATATTA
TCAGAACGTTAAAATGTCTGGAATTATATATATTCTGTTTCATTTGATAACTATTATTTGTTTTGTAGGACTATTTTAGAGGATATTTGAGTATATTTGGATGTGTGTTT
GTCTTGTAGGATTTCTATTCGGGAATATCTATT
Protein sequenceShow/hide protein sequence
MPSGITKLVKPLSVVLAPTVRIHGDTFDTVPGVGPMFPAEETTTIPRSTAWNAPTESASLKNSLGSPPTEIEITSTPSSIAASKAAKVFGSIHSLASSGQQTL