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Cmc06g0175771 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0175771
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr06:32579992..32581262
RNA-Seq ExpressionCmc06g0175771
SyntenyCmc06g0175771
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032396.1 hypothetical protein E6C27_scaffold219G002730 [Cucumis melo var. makuwa]1.7e-10100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

KAA0063966.1 hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]1.7e-10100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

KAA0067187.1 hypothetical protein E6C27_scaffold38G002710 [Cucumis melo var. makuwa]1.7e-10100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

TYJ98810.1 hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa]1.7e-10100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

TYK24101.1 hypothetical protein E5676_scaffold943G00760 [Cucumis melo var. makuwa]1.7e-10100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

TrEMBL top hitse value%identityAlignment
A0A5A7VJ46 Uncharacterized protein8.3e-11100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5D3BG96 Uncharacterized protein8.3e-11100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5D3C0E4 Uncharacterized protein8.3e-1183.72Show/hide
Query:  STFVWLKSSGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        S  V +  SGEGK RGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  STFVWLKSSGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5D3CKK9 Retrotransposon protein8.3e-11100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5D3DAI2 Uncharacterized protein8.3e-1180.43Show/hide
Query:  QLGSTFVWLKSSGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        +LG+ +  L  S EGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  QLGSTFVWLKSSGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGC
GACAGAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
TGTTCTTTATCTTCTTCTCTAAGATAACAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGAATTAAGAGGATTTTTCGACCTCCATTTGAGTAACCTT
GATACTAAGTGTTCCTTTTATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTTCAGGCGAAGGTAAAGG
TAGAGGAAAGCTGGCGAGCGACAGAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCTTTTTTAA
TGAAAATTTATTCTTCCCTCGTTTTAAAAAGTGTCTCTTGTCATTGTTTCTTTTTAGTAACGACCTCAGCTTAGTATAAAGAGTTTGGTCGTTAC
Protein sequenceShow/hide protein sequence
MIRIKLIGEFYCQLGSTFVWLKSSGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF