; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0176201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0176201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCMiso1.1chr06:33097616..33098245
RNA-Seq ExpressionCmc06g0176201
SyntenyCmc06g0176201
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.9e-9189.74Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSF+RQVWYHNLTQEL ILNDQLFKFPVIAMD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF+EQ DFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL
        SIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IYDVAYLLKLMMIRTM ESMVEFAIIAQRHLGT NDLKHMIRNCE+L
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL

TYK19450.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]4.1e-11599.52Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVI
        SIQYLKNNKGFEF KQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVI
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVI

Query:  FSQKLWIGL
        FSQKLWIGL
Subjt:  FSQKLWIGL

XP_008449175.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]6.6e-9799.44Show/hide
Query:  MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRAL
        MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRAL
Subjt:  MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRAL

Query:  FLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
        FLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLE MVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
Subjt:  FLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]3.5e-9088.21Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSF+R+VWYHN  QEL+ILNDQLFKFPVIAMD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF+EQ DFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL
        SIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IYDVAYLLKLMMIRTM ESMVEFAIIAQRHLGT NDLKHMIRNCE+L
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL

XP_008466654.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]1.4e-8686.15Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSF+RQVWYHNLTQEL+ILNDQLFK P+I MD EFLGFLRST RGAPEEHLYQDLKFNLNHLKILQL GLTLMD+NEHVGL WVFTFSDF+EQ DFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL
        SIQYLKNNK FEF K RK  IPS EFRRA FLPIFSSN+ITKW TFH IYDVAYLLKLMMIRTM ESMVEFA IAQR LGT NDLKHMI NCEHL
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL

TrEMBL top hitse value%identityAlignment
A0A1S3BKU5 putative CCR4-associated factor 1 homolog 83.2e-9799.44Show/hide
Query:  MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRAL
        MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRAL
Subjt:  MDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRAL

Query:  FLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
        FLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLE MVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL
Subjt:  FLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL

A0A1S3BY95 Poly(A)-specific ribonuclease1.7e-9088.21Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSF+R+VWYHN  QEL+ILNDQLFKFPVIAMD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF+EQ DFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL
        SIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IYDVAYLLKLMMIRTM ESMVEFAIIAQRHLGT NDLKHMIRNCE+L
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL

A0A5A7TN62 Poly(A)-specific ribonuclease9.0e-9289.74Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSF+RQVWYHNLTQEL ILNDQLFKFPVIAMD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF+EQ DFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL
        SIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IYDVAYLLKLMMIRTM ESMVEFAIIAQRHLGT NDLKHMIRNCE+L
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL

A0A5D3D333 Poly(A)-specific ribonuclease1.7e-9088.21Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSF+R+VWYHN  QEL+ILNDQLFKFPVIAMD EF GFLRST RGAPEEH YQDLKFNLNHLKILQL GLTLMDENEHVGL WVFTFSDF+EQ DFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL
        SIQYLKN KGFEF KQRKDGIPS EFRRA FLPIFSSN+ITKW TFH IYDVAYLLKLMMIRTM ESMVEFAIIAQRHLGT NDLKHMIRNCE+L
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHL

A0A5D3D7M4 Poly(A)-specific ribonuclease2.0e-11599.52Show/hide
Query:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
        MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT
Subjt:  MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPT

Query:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVI
        SIQYLKNNKGFEF KQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVI
Subjt:  SIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVI

Query:  FSQKLWIGL
        FSQKLWIGL
Subjt:  FSQKLWIGL

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 95.0e-2332.84Show/hide
Query:  RQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFL-RSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENE---------HVGLYWVFTFSDFNEQK
        R+VW  NL  E  ++++ +  +P I+MD EF G + +S  R    + LY  LK N++ L ++Q+ GLTL D N          H G  W F F DF+  +
Subjt:  RQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFL-RSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENE---------HVGLYWVFTFSDFNEQK

Query:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLG-TANDLKHMIRNCE
        D  +P SI+ L+  +G +F +  +DG+ S  F   +       N+   W TFH  YD  YL+K++  R +  ++ EF  + +   G    D+KHM++ CE
Subjt:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLG-TANDLKHMIRNCE

Query:  HLTF
           F
Subjt:  HLTF

Q9LXM4 Putative CCR4-associated factor 1 homolog 89.5e-2236.46Show/hide
Query:  LSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMK
        +S++ D L  +  IA+D EF   LR TT+ A +E  Y D+ F+++  K++QL GLTL D N  +G  W   FSDF    D  +  SI++L+ N G +  K
Subjt:  LSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMK

Query:  QRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLT
         R++GI    F   +F  +  + +   W TFH  YD+AYLLK      +  +   F+    R LG+  DLK M   CE L+
Subjt:  QRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLT

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.4e-2031.88Show/hide
Query:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPE--------EHLYQDLKFNLNHLKILQLAGLTLMDENEHV-------GLYWVFTFS
        IR+VW HNL QE++++   +  FP +AMD EF G +  T    P         E+ Y  LK N+N LK++QL GLTL DE  ++          W F F 
Subjt:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPE--------EHLYQDLKFNLNHLKILQLAGLTLMDENEHV-------GLYWVFTFS

Query:  DFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHM
        +FN   D  +  SI+ L+ +   +  K  + G+ +  F   L       N    W TFH  YD  YLLKL+  + + E + +F    ++      D+K++
Subjt:  DFNEQKDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHM

Query:  IRNCEHL
        +  C +L
Subjt:  IRNCEHL

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.5e-2233.33Show/hide
Query:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK
        IR+VW  NL +E+ ++ D +  FP +AMD EF G +     T  +  ++ Y+ LK N+N LK++QL GLT  +E  ++          W F F +F+   
Subjt:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK

Query:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH
        D  +  SI+ LK + G +  K   DGI S  F   L       N+   W TFH  YD  YLLKL+  + + +S  +F  +   +  T  D+KH+++ C  
Subjt:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH

Query:  L
        L
Subjt:  L

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.2e-2132.67Show/hide
Query:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDE--------NEHVGLYWVFTFSDFNEQ
        IR+VW  NL  E++++ + +  FP +AMD EF G +     T     E+ Y+ LK N+N LK++QL GLT  DE         ++    W F F +F+ +
Subjt:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDE--------NEHVGLYWVFTFSDFNEQ

Query:  KDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCE
         D  +  SI+ L+ + G +F+K  + GI S  F   L       N+   W TFH  YD  YLLKL+  + + E+   F  +   +     D+KH+++ C 
Subjt:  KDFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCE

Query:  HL
         L
Subjt:  HL

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-2333.33Show/hide
Query:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK
        IR+VW  NL +E+ ++ D +  FP +AMD EF G +     T  +  ++ Y+ LK N+N LK++QL GLT  +E  ++          W F F +F+   
Subjt:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK

Query:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH
        D  +  SI+ LK + G +  K   DGI S  F   L       N+   W TFH  YD  YLLKL+  + + +S  +F  +   +  T  D+KH+++ C  
Subjt:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH

Query:  L
        L
Subjt:  L

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-2333.33Show/hide
Query:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK
        IR+VW  NL +E+ ++ D +  FP +AMD EF G +     T  +  ++ Y+ LK N+N LK++QL GLT  +E  ++          W F F +F+   
Subjt:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK

Query:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH
        D  +  SI+ LK + G +  K   DGI S  F   L       N+   W TFH  YD  YLLKL+  + + +S  +F  +   +  T  D+KH+++ C  
Subjt:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH

Query:  L
        L
Subjt:  L

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-2333.33Show/hide
Query:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK
        IR+VW  NL +E+ ++ D +  FP +AMD EF G +     T  +  ++ Y+ LK N+N LK++QL GLT  +E  ++          W F F +F+   
Subjt:  IRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRST--TRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVG-------LYWVFTFSDFNEQK

Query:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH
        D  +  SI+ LK + G +  K   DGI S  F   L       N+   W TFH  YD  YLLKL+  + + +S  +F  +   +  T  D+KH+++ C  
Subjt:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEH

Query:  L
        L
Subjt:  L

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.7e-2336.46Show/hide
Query:  LSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMK
        +S++ D L  +  IA+D EF   LR TT+ A +E  Y D+ F+++  K++QL GLTL D N  +G  W   FSDF    D  +  SI++L+ N G +  K
Subjt:  LSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKGFEFMK

Query:  QRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLT
         R++GI    F   +F  +  + +   W TFH  YD+AYLLK      +  +   F+    R LG+  DLK M   CE L+
Subjt:  QRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLT

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-2432.84Show/hide
Query:  RQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFL-RSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENE---------HVGLYWVFTFSDFNEQK
        R+VW  NL  E  ++++ +  +P I+MD EF G + +S  R    + LY  LK N++ L ++Q+ GLTL D N          H G  W F F DF+  +
Subjt:  RQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFL-RSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENE---------HVGLYWVFTFSDFNEQK

Query:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLG-TANDLKHMIRNCE
        D  +P SI+ L+  +G +F +  +DG+ S  F   +       N+   W TFH  YD  YL+K++  R +  ++ EF  + +   G    D+KHM++ CE
Subjt:  DFSSPTSIQYLKNNKGFEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLG-TANDLKHMIRNCE

Query:  HLTF
           F
Subjt:  HLTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCATTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTGTCCATTCTCAACGACCAACTTTTCAAGTTTCCAGTGATCGCGATGGACATTGAGTTCCTTGG
CTTTCTCCGATCAACTACGAGAGGTGCTCCCGAGGAACATCTTTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTAGCCGGCCTCACTTTGATGG
ATGAGAATGAGCATGTTGGGTTGTATTGGGTGTTCACCTTTTCTGATTTTAATGAACAAAAAGACTTTTCTAGTCCTACGTCAATCCAATATTTGAAGAACAACAAAGGG
TTTGAATTCATGAAACAGAGGAAAGATGGAATTCCATCGATTGAATTTCGACGTGCATTATTTCTGCCCATCTTTTCTAGCAATCAAATAACCAAATGGAACACATTCCA
TCACATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGTTAGAGTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGCGAACG
ACCTCAAGCACATGATTCGCAATTGTGAACACTTAACATTTATTGTCATTTTCTCGCAGAAACTTTGGATTGGTCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCATTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTGTCCATTCTCAACGACCAACTTTTCAAGTTTCCAGTGATCGCGATGGACATTGAGTTCCTTGG
CTTTCTCCGATCAACTACGAGAGGTGCTCCCGAGGAACATCTTTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTAGCCGGCCTCACTTTGATGG
ATGAGAATGAGCATGTTGGGTTGTATTGGGTGTTCACCTTTTCTGATTTTAATGAACAAAAAGACTTTTCTAGTCCTACGTCAATCCAATATTTGAAGAACAACAAAGGG
TTTGAATTCATGAAACAGAGGAAAGATGGAATTCCATCGATTGAATTTCGACGTGCATTATTTCTGCCCATCTTTTCTAGCAATCAAATAACCAAATGGAACACATTCCA
TCACATTTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGTTAGAGTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGCGAACG
ACCTCAAGCACATGATTCGCAATTGTGAACACTTAACATTTATTGTCATTTTCTCGCAGAAACTTTGGATTGGTCTATAA
Protein sequenceShow/hide protein sequence
MSFIRQVWYHNLTQELSILNDQLFKFPVIAMDIEFLGFLRSTTRGAPEEHLYQDLKFNLNHLKILQLAGLTLMDENEHVGLYWVFTFSDFNEQKDFSSPTSIQYLKNNKG
FEFMKQRKDGIPSIEFRRALFLPIFSSNQITKWNTFHHIYDVAYLLKLMMIRTMLESMVEFAIIAQRHLGTANDLKHMIRNCEHLTFIVIFSQKLWIGL