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Cmc06g0176861 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0176861
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionAutophagy-related protein
Genome locationCMiso1.1chr06:33691504..33692464
RNA-Seq ExpressionCmc06g0176861
SyntenyCmc06g0176861
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016020 - membrane (cellular component)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY41925.1 hypothetical protein CUMW_063080 [Citrus unshiu]1.9e-1986.67Show/hide
Query:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        A+LV++EKAERS+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

KAB5564374.1 hypothetical protein DKX38_004428 [Salix brachista]5.1e-2073.97Show/hide
Query:  LNCGCGTMREHAFL--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        ++ GC T+  +  +  V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  LNCGCGTMREHAFL--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

KAE9445937.1 hypothetical protein C3L33_22160, partial [Rhododendron williamsianum]5.1e-2086.67Show/hide
Query:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        ++LV++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

KAG6791864.1 hypothetical protein POTOM_000998 [Populus tomentosa]1.9e-1988.14Show/hide
Query:  FLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        F V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  FLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

XP_034897582.1 autophagy-related protein 8f-like [Populus alba]1.9e-1988.14Show/hide
Query:  FLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        F V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  FLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

TrEMBL top hitse value%identityAlignment
A0A2H5NQE9 Autophagy-related protein9.4e-2086.67Show/hide
Query:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        A+LV++EKAERS+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

A0A4U5P688 Autophagy-related protein9.4e-2088.14Show/hide
Query:  FLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        F V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  FLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

A0A5B7A881 Autophagy-related protein (Fragment)4.2e-2081.54Show/hide
Query:  TMREHAFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        T  +   LV++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  TMREHAFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

A0A5N5NA46 Uncharacterized protein2.5e-2073.97Show/hide
Query:  LNCGCGTMREHAFL--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        ++ GC T+  +  +  V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  LNCGCGTMREHAFL--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

A0A6A4KS32 Autophagy-related protein (Fragment)2.5e-2086.67Show/hide
Query:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        ++LV++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  AFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

SwissProt top hitse value%identityAlignment
M1C146 Autophagy-related protein 8C-like2.4e-2082.46Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        V++EKAERS+IP+IDKKKYLVP DLTVGQFVY++RKRIKLSAEKAIFIFV N+L PT
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

Q8S926 Autophagy-related protein 8e3.7e-2185.96Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        V++EKAE+S +PNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

Q8S927 Autophagy-related protein 8c5.3e-2078.95Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        V++E+AERS++PNIDKKKYLVP DLTVGQFVY++RKRIKLSAEKAIF+FV N L PT
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

Q8VYK7 Autophagy-related protein 8f2.4e-2085.71Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP
        V++EKAE+S+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL P
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP

Q9LZZ9 Autophagy-related protein 8g8.2e-2184.21Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        V++EK+E+S+IPNIDKKKYLVP DLTVGQFVY+IRKRI+LSAEKAIFIFVDNVL PT
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

Arabidopsis top hitse value%identityAlignment
AT2G45170.1 AUTOPHAGY 8E2.6e-2285.96Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        V++EKAE+S +PNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

AT2G45170.2 AUTOPHAGY 8E2.6e-2285.96Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        V++EKAE+S +PNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

AT3G60640.1 Ubiquitin-like superfamily protein5.8e-2284.21Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT
        V++EK+E+S+IPNIDKKKYLVP DLTVGQFVY+IRKRI+LSAEKAIFIFVDNVL PT
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT

AT4G16520.1 Ubiquitin-like superfamily protein1.7e-2185.71Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP
        V++EKAE+S+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL P
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP

AT4G16520.2 Ubiquitin-like superfamily protein1.7e-2185.71Show/hide
Query:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP
        V++EKAE+S+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL P
Subjt:  VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATTGTGGATGTGGGACCATGAGAGAACACGCCTTTCTTGTACTTATGGAGAAGGCAGAGAGAAGTAATATTCCCAACATTGACAAGAAAAAGTACCTA
GTGCCTGTTGACCTGACTGTTGGTCAATTTGTTTATATTATTCGGAAAAGAATAAAATTGAGTGCAGAAAAGGCAATTTTTATATTTGTGGACAATGTGCTATCA
CCAACATGTTAA
mRNA sequenceShow/hide mRNA sequence
TTATTTGGGCTGCAGATCTCATCCATGAGATTATGATAGCACTATAACAAAGAAAACATTGATTTTTTTAGCAAAAGTGCATAGACCCAAAGTCAATGTTGAATT
GTGGATGTGGGACCATGAGAGAACACGCCTTTCTTGTACTTATGGAGAAGGCAGAGAGAAGTAATATTCCCAACATTGACAAGAAAAAGTACCTAGTGCCTGTTG
ACCTGACTGTTGGTCAATTTGTTTATATTATTCGGAAAAGAATAAAATTGAGTGCAGAAAAGGCAATTTTTATATTTGTGGACAATGTGCTATCACCAACATGTT
AAACACCCTTTTTGCTTCTTGGGTCAAGATCTGTGAGGAAAGCAAGATCTACGTTGCTGTTTGT
Protein sequenceShow/hide protein sequence
MLNCGCGTMREHAFLVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPTC