; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc06g0177321 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc06g0177321
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome locationCMiso1.1chr06:34051524..34054113
RNA-Seq ExpressionCmc06g0177321
SyntenyCmc06g0177321
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041077.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]6.1e-4078.29Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLA                            RSPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]9.1e-4499.01Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]1.8e-44100Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]3.4e-3890.1Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSFR  VRT S  KS SS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]1.1e-4194.06Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTN+SAKSSSS FPLP+KSTAPSVRRFSLARSPSELGC+QSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCT PG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0L1I6 Uncharacterized protein1.1e-3798.9Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSFRTFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X18.9e-45100Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

A0A1S3BL94 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X22.1e-38100Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A5A7THI0 Protein NUCLEAR FUSION DEFECTIVE 63.0e-4078.29Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLA                            RSPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X11.6e-3890.1Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSFR  VRT S  KS SS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial2.7e-0639.6Show/hide
Query:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MAS C R  S+ + S+FR+ +   S    S+S F        PS      +R   +LG +QSLLP + AVA AR+ SCL  +S++ R+L+QG+LC  +PG
Subjt:  MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT4G17310.1 unknown protein1.6e-2259.22Show/hide
Query:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS
        MASAC+++ +R S SS ++ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQG LCCTS
Subjt:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS

Query:  PGL
        P L
Subjt:  PGL

AT4G17310.2 unknown protein1.2e-1756.99Show/hide
Query:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASAC+++ +R S SS ++ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQ
Subjt:  MASACQRIASRISQSSFRTFVR--TNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein1.3e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.6 unknown protein1.3e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.7 unknown protein1.3e-1653.12Show/hide
Query:  RIASRISQSSFRTFVRT----------NSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTFVRT----------NSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCCGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCAGTTCCCTCTACC
TTCCAAATCCACTGCTCCGTCTGTTCGCCGATTCTCGCTCGCCCGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGTACGAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
TTAACCCCTTCAGTTCAATCGTTTCTCATAGAATTTCCAGATCTCCGTTCTTCTTTCATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCCG
AACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCAGTTCCCTCTACCTTCCAAATCCACTGCTCCGTCTGTTCGCCGATTCTCGCTCGCCCGGTCTCCGT
CGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACGAATTCGAGGAGTTGTCGTGCGCTTTCTCAG
GGTATTCTCTGCTGCACCTCTCCCGGCCTCTAACATGAAATATTATGCTTTCTTTTGAAGTGCACATAATATCATTTGTCAATATGCTTGAAAGAAATAGATTGGGAATC
TACGGAGCATCCGATTATGGTGCAGTGAATCGATTTCAAATGCAATTGATGGTACGTGAGACATATTTGCTGTTTTTGAAGAGTTAGGTTTATCCGTTCCAAGGTGACTT
TTTTTGGCAGATTGTTGCAGTGACAAGGGGATATCAGTAATGGTTTAGAGGATTTCTTTTATGAACTGTCACGAATACTGCTCGTTAACTAATTTTGATTCATCCAGACG
ACAGATTGTGTTGAAATGAAAATATAGTGATTCTAGTTCTCATGGCAACTTAGGAAATCATATTTTGCCATTGTTGTGGGTTATAAATGTTTGATCTTTGTCATACATTC
AATATGTACGTTTATTATTTATTGAGATACACATCATATTATTTTCTTGTCTTTTGGTATATCTTGAAGACAAATGGGATCTTTTTAGCAACTAAGAAAATGAGGCCTGC
CATGTTCTGTACTATAACTTAAGATATTTGATGGGGTTTGTTGGAAATGATCTTGTATAAGAGATCATTTTAGCTTGTTCGTCATCAAGGTACTTGATTGTCAGGTTGAA
AGAAAGTTTTTAGTTTTGTTCTATTC
Protein sequenceShow/hide protein sequence
MASACQRIASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL