; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0180261 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0180261
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Tf2-6 polyprotein
Genome locationCMiso1.1chr07:63018..64037
RNA-Seq ExpressionCmc07g0180261
SyntenyCmc07g0180261
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047643.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]1.8e-17692.92Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVK DQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKA DALSRRPPDI LNSIS+PYWMDLETIKEEVE DEKLKKI ASL KEDE QT+KFT+KNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVVGGHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLL+PL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFL LKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

KAA0060678.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]4.0e-17692.92Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QK LSKLLGYSFEVVYKPGLENKAADALSRRPPDI LN+IS+PYWMDLETIKEEVEKDEKLKKI  SL +EDE QTSKFT+KNSLLHYKNRLVI KASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVVGGHSGFLRT KRLASELYWEGMKSDVKKH E+C+TCQRNKSLALSP GLL+PL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

KAA0064689.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]3.3e-18697.94Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIK+EVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISK SSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVS+
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

TYK02195.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-17994.99Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI LNSIS+PYWMDLETIKEEVEKDEKLKKIVASL +EDE+QTSKFT+KNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVV GHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLLMPL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

TYK23779.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-18194.99Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI LNSIS+PYWMDLETIKEEVEKDEKLKKIVASL +EDE+QTSKFT+KNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAI+NTFHDSVVGGHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLLMPL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

TrEMBL top hitse value%identityAlignment
A0A5A7TVR3 Putative retroelement pol polyprotein8.7e-17792.92Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVK DQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKA DALSRRPPDI LNSIS+PYWMDLETIKEEVE DEKLKKI ASL KEDE QT+KFT+KNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVVGGHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLL+PL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFL LKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

A0A5A7UZJ7 Putative retroelement pol polyprotein1.9e-17692.92Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QK LSKLLGYSFEVVYKPGLENKAADALSRRPPDI LN+IS+PYWMDLETIKEEVEKDEKLKKI  SL +EDE QTSKFT+KNSLLHYKNRLVI KASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVVGGHSGFLRT KRLASELYWEGMKSDVKKH E+C+TCQRNKSLALSP GLL+PL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

A0A5A7VGU4 Putative retroelement pol polyprotein1.6e-18697.94Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIK+EVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISK SSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVS+
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

A0A5D3BSP2 Ty3/gypsy retrotransposon protein6.4e-18094.99Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI LNSIS+PYWMDLETIKEEVEKDEKLKKIVASL +EDE+QTSKFT+KNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAILNTFHDSVV GHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLLMPL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

A0A5D3DKH5 Ty3/gypsy retrotransposon protein9.0e-18294.99Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLS+QRWRPYLL AKFVVKTDQKSLKFLLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI LNSIS+PYWMDLETIKEEVEKDEKLKKIVASL +EDE+QTSKFT+KNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL
        IPAI+NTFHDSVVGGHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLLMPL+IP+QIWSDIS DFIDGLPKAKGWDVILVVVDRL
Subjt:  IPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRL

Query:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVSD
Subjt:  SKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein4.2e-3528.81Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL
        ++S P L   +F+    +ETDAS   VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +   
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D   NSI+    + +       +  E   D KL  +   L  ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF

Query:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST
         LK+ LL + K+++++   + L   I+  +H+     H G       +     W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +S 
Subjt:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST

Query:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        DFI  LP++ G++ + VVVDR SK +  +      TA+  A +F + ++   G P  I++D
Subjt:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

P0CT35 Transposon Tf2-2 polyprotein4.2e-3528.81Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL
        ++S P L   +F+    +ETDAS   VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +   
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D   NSI+    + +       +  E   D KL  +   L  ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF

Query:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST
         LK+ LL + K+++++   + L   I+  +H+     H G       +     W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +S 
Subjt:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST

Query:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        DFI  LP++ G++ + VVVDR SK +  +      TA+  A +F + ++   G P  I++D
Subjt:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

P0CT36 Transposon Tf2-3 polyprotein4.2e-3528.81Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL
        ++S P L   +F+    +ETDAS   VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +   
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D   NSI+    + +       +  E   D KL  +   L  ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF

Query:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST
         LK+ LL + K+++++   + L   I+  +H+     H G       +     W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +S 
Subjt:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST

Query:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        DFI  LP++ G++ + VVVDR SK +  +      TA+  A +F + ++   G P  I++D
Subjt:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

P0CT41 Transposon Tf2-12 polyprotein4.2e-3528.81Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL
        ++S P L   +F+    +ETDAS   VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +   
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D   NSI+    + +       +  E   D KL  +   L  ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF

Query:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST
         LK+ LL + K+++++   + L   I+  +H+     H G       +     W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +S 
Subjt:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST

Query:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        DFI  LP++ G++ + VVVDR SK +  +      TA+  A +F + ++   G P  I++D
Subjt:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

Q9UR07 Transposon Tf2-11 polyprotein4.2e-3528.81Show/hide
Query:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL
        ++S P L   +F+    +ETDAS   VGAVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +   
Subjt:  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRA--KFVVKTDQKSL--KFLL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D   NSI+    + +       +  E   D KL  +   L  ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------RPPDIHLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLRKEDENQTSKF

Query:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST
         LK+ LL + K+++++   + L   I+  +H+     H G       +     W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +S 
Subjt:  TLKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDIST

Query:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD
        DFI  LP++ G++ + VVVDR SK +  +      TA+  A +F + ++   G P  I++D
Subjt:  DFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLHGFPTSIVSD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCTCTGCCAACGTTGGCCTTACCCAACTTTACACTTCCATTTGAAATAGAGACAGATGCATCCGGTTTTGGAGTGGGAGCAGTACTAATCCAGTCAAAGAGACC
CATTGCCTTCTACAGCCATACACTATCCATGAGAGATAGAGCCCGGCCAGTATATGAACGCGAGTTGATGGCTGTTGTACTATCCATACAAAGATGGAGGCCATACTTAC
TTAGGGCAAAATTCGTAGTAAAAACGGATCAAAAGTCACTGAAATTCTTGCTAGAACAAAGGGTCATCCAACCACAATATCAAAAATGGCTATCTAAACTATTGGGATAC
TCATTTGAAGTGGTGTACAAACCGGGCTTAGAAAATAAAGCAGCCGATGCTTTATCAAGAAGACCACCAGATATACACTTAAACAGCATTTCAGTACCATATTGGATGGA
CTTGGAAACCATAAAGGAAGAAGTGGAGAAAGATGAAAAGCTAAAAAAGATAGTAGCAAGCTTACGCAAAGAAGACGAAAACCAAACCAGCAAATTCACACTAAAGAATA
GCCTCCTGCATTACAAGAATAGGCTGGTAATCTCAAAAGCTTCCTCCCTAATTCCAGCCATATTGAATACGTTTCATGACTCAGTAGTAGGAGGACACTCCGGGTTCCTA
AGAACATGTAAAAGACTAGCAAGTGAGCTATATTGGGAGGGGATGAAATCAGATGTTAAAAAACATTGTGAATCTTGCATAACCTGCCAACGCAACAAAAGCTTAGCTCT
ATCACCAACCGGACTATTAATGCCACTTGAAATACCGAATCAAATTTGGAGCGACATCTCTACGGATTTCATTGATGGTCTACCTAAAGCAAAAGGATGGGATGTAATAC
TCGTGGTAGTAGATCGACTCAGCAAATACAGCCACTTCTTGGCCCTTAAACACCCTTACACAGCCAAGACAGTAGCAGAAATCTTTGTAAAAGAAATAGTTCGACTGCAC
GGCTTCCCTACTTCCATTGTCTCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCTCTGCCAACGTTGGCCTTACCCAACTTTACACTTCCATTTGAAATAGAGACAGATGCATCCGGTTTTGGAGTGGGAGCAGTACTAATCCAGTCAAAGAGACC
CATTGCCTTCTACAGCCATACACTATCCATGAGAGATAGAGCCCGGCCAGTATATGAACGCGAGTTGATGGCTGTTGTACTATCCATACAAAGATGGAGGCCATACTTAC
TTAGGGCAAAATTCGTAGTAAAAACGGATCAAAAGTCACTGAAATTCTTGCTAGAACAAAGGGTCATCCAACCACAATATCAAAAATGGCTATCTAAACTATTGGGATAC
TCATTTGAAGTGGTGTACAAACCGGGCTTAGAAAATAAAGCAGCCGATGCTTTATCAAGAAGACCACCAGATATACACTTAAACAGCATTTCAGTACCATATTGGATGGA
CTTGGAAACCATAAAGGAAGAAGTGGAGAAAGATGAAAAGCTAAAAAAGATAGTAGCAAGCTTACGCAAAGAAGACGAAAACCAAACCAGCAAATTCACACTAAAGAATA
GCCTCCTGCATTACAAGAATAGGCTGGTAATCTCAAAAGCTTCCTCCCTAATTCCAGCCATATTGAATACGTTTCATGACTCAGTAGTAGGAGGACACTCCGGGTTCCTA
AGAACATGTAAAAGACTAGCAAGTGAGCTATATTGGGAGGGGATGAAATCAGATGTTAAAAAACATTGTGAATCTTGCATAACCTGCCAACGCAACAAAAGCTTAGCTCT
ATCACCAACCGGACTATTAATGCCACTTGAAATACCGAATCAAATTTGGAGCGACATCTCTACGGATTTCATTGATGGTCTACCTAAAGCAAAAGGATGGGATGTAATAC
TCGTGGTAGTAGATCGACTCAGCAAATACAGCCACTTCTTGGCCCTTAAACACCCTTACACAGCCAAGACAGTAGCAGAAATCTTTGTAAAAGAAATAGTTCGACTGCAC
GGCTTCCCTACTTCCATTGTCTCCGATTGA
Protein sequenceShow/hide protein sequence
MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSIQRWRPYLLRAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGY
SFEVVYKPGLENKAADALSRRPPDIHLNSISVPYWMDLETIKEEVEKDEKLKKIVASLRKEDENQTSKFTLKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFL
RTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLLMPLEIPNQIWSDISTDFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFVKEIVRLH
GFPTSIVSD