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Cmc07g0181241 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0181241
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDNA ligase
Genome locationCMiso1.1chr07:586401..587215
RNA-Seq ExpressionCmc07g0181241
SyntenyCmc07g0181241
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031776.1 hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3472.41Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNP-----ALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDN
        M N Y+PFSFT KLKSSI  CFR DH   L    D +P      LKSM ++ PELRGMCR+LVARI   SRRRYHHSADFRYDPSSYALNFEDEQVRDD+
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNP-----ALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDN

Query:  EFPIRDFTSRLPASPP
        EFPIRDF SRLPASPP
Subjt:  EFPIRDFTSRLPASPP

KGN55462.1 hypothetical protein Csa_012581 [Cucumis sativus]4.5e-5086.78Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDD--NPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFP
        MFNHYNPFSFTHKLKS I SCFRPDHD ELH+N     +PALKSMTSDLPELRGMCRSLVARISWPSRRRYHHS DFRYDPSSYALNFEDEQ+R D+EFP
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDD--NPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFP

Query:  IRDFTSRLPASPPPPVNLMRF
        IRDFTSRLPAS PP VNLMRF
Subjt:  IRDFTSRLPASPPPPVNLMRF

XP_008452891.1 PREDICTED: uncharacterized protein LOC103493778 [Cucumis melo]1.6e-63100Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR
        MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR

Query:  DFTSRLPASPPPPVNLMRF
        DFTSRLPASPPPPVNLMRF
Subjt:  DFTSRLPASPPPPVNLMRF

XP_022940408.1 uncharacterized protein LOC111446022 [Cucurbita moschata]1.2e-3472.41Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNP-----ALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDN
        M N Y+PFSFT KLKSSI  CFR DH   L    D +P      LKSM ++ PELRGMCR+LVARI   SRRRYHHSADFRYDPSSYALNFEDEQVRDD+
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNP-----ALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDN

Query:  EFPIRDFTSRLPASPP
        EFPIRDF SRLPASPP
Subjt:  EFPIRDFTSRLPASPP

XP_023523424.1 uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]4.1e-3573.5Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDN------PALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDD
        M N Y+PFSFT KLKSSI  CFR DH  +  ENEDD+        LKSM ++ PELRGMCR+LVARI   SRRRYHHSADFRYDPSSYALNFEDEQVRDD
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDN------PALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDD

Query:  NEFPIRDFTSRLPASPP
        +EFPIRDF SRLPASPP
Subjt:  NEFPIRDFTSRLPASPP

TrEMBL top hitse value%identityAlignment
A0A0A0L4E2 Uncharacterized protein2.2e-5086.78Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDD--NPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFP
        MFNHYNPFSFTHKLKS I SCFRPDHD ELH+N     +PALKSMTSDLPELRGMCRSLVARISWPSRRRYHHS DFRYDPSSYALNFEDEQ+R D+EFP
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDD--NPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFP

Query:  IRDFTSRLPASPPPPVNLMRF
        IRDFTSRLPAS PP VNLMRF
Subjt:  IRDFTSRLPASPPPPVNLMRF

A0A1S3BVQ9 uncharacterized protein LOC1034937787.7e-64100Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR
        MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR

Query:  DFTSRLPASPPPPVNLMRF
        DFTSRLPASPPPPVNLMRF
Subjt:  DFTSRLPASPPPPVNLMRF

A0A5A7VBS3 DNA ligase7.7e-64100Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR
        MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIR

Query:  DFTSRLPASPPPPVNLMRF
        DFTSRLPASPPPPVNLMRF
Subjt:  DFTSRLPASPPPPVNLMRF

A0A6J1FP70 uncharacterized protein LOC1114460225.8e-3572.41Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNP-----ALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDN
        M N Y+PFSFT KLKSSI  CFR DH   L    D +P      LKSM ++ PELRGMCR+LVARI   SRRRYHHSADFRYDPSSYALNFEDEQVRDD+
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNP-----ALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDN

Query:  EFPIRDFTSRLPASPP
        EFPIRDF SRLPASPP
Subjt:  EFPIRDFTSRLPASPP

A0A6J1J1H3 uncharacterized protein LOC1114804171.3e-3470.94Show/hide
Query:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDN------PALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDD
        M N Y+PFSFT KLKSSI  CFR DH ++  E+EDD+        LKSM ++ PE+RGMCR+LVARI    RRRYHHSADFRYDPSSYALNFEDEQVRDD
Subjt:  MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDN------PALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDD

Query:  NEFPIRDFTSRLPASPP
        +EFPIRDF SRLPASPP
Subjt:  NEFPIRDFTSRLPASPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11070.1 unknown protein3.5e-0845.35Show/hide
Query:  LKSMTSDLPELRGMCRSLVARISWPSR----------RRYHHS----ADFRYDPSSYALNFEDE-QVRDDNEFPIRDFTSRLPASP
        LKS   +L ELR  CR + +RI    R            +HHS     DF YDP SYALNFED  +  DD  FP  +FT+RLP SP
Subjt:  LKSMTSDLPELRGMCRSLVARISWPSR----------RRYHHS----ADFRYDPSSYALNFEDE-QVRDDNEFPIRDFTSRLPASP

AT5G35090.1 unknown protein7.0e-0934.33Show/hide
Query:  SFTHKLKS--SIPSCFRP---DHDAELHENEDDNPALKSMTSDLPELRGM-----------------CRSLVAR-------ISWPSRRRYHHSADFRYDP
        S   KLKS   I  CFR     H   + ++   +P     ++  P   GM                 C+SL+ R       +    +    H+ADF YDP
Subjt:  SFTHKLKS--SIPSCFRP---DHDAELHENEDDNPALKSMTSDLPELRGM-----------------CRSLVAR-------ISWPSRRRYHHSADFRYDP

Query:  SSYALNFEDEQVRDDN--EFPIRDFTSRLPASPP
        SSYALNF D+   DDN   FP+R+F++RLP SPP
Subjt:  SSYALNFEDEQVRDDN--EFPIRDFTSRLPASPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACCACTACAATCCCTTTTCATTTACTCACAAGCTCAAATCCTCAATCCCTTCTTGTTTCCGCCCCGATCACGATGCCGAATTACACGAAAACGAAGACGATAA
TCCTGCTCTCAAATCAATGACCTCTGACCTCCCGGAGCTCCGTGGGATGTGCCGGAGTCTCGTCGCTCGGATCAGTTGGCCGAGTCGCCGACGCTACCATCACTCTGCTG
ATTTTCGATACGATCCTTCCAGCTATGCCCTTAATTTCGAAGACGAACAAGTTCGAGATGACAATGAGTTCCCAATTAGGGATTTCACTTCAAGATTGCCGGCGTCGCCG
CCGCCGCCGGTAAATCTCATGCGATTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTAGAGAGCCAAACTGCCGCAATTATCTCTTCTCTCTCACTCTTATCTGTCCCCTTCCATTCTTCATTCCTCTTCTTCTTATTTTTCTCCCAACAGTTCTCTATAAAT
ATCTCTTCCCATTTCTCTCCTCCAATTCCATCATCACTACTCAATTCTCACCTCTCATCCATTTTTCAGTTTCCATCTTCACCATGTTCAACCACTACAATCCCTTTTCA
TTTACTCACAAGCTCAAATCCTCAATCCCTTCTTGTTTCCGCCCCGATCACGATGCCGAATTACACGAAAACGAAGACGATAATCCTGCTCTCAAATCAATGACCTCTGA
CCTCCCGGAGCTCCGTGGGATGTGCCGGAGTCTCGTCGCTCGGATCAGTTGGCCGAGTCGCCGACGCTACCATCACTCTGCTGATTTTCGATACGATCCTTCCAGCTATG
CCCTTAATTTCGAAGACGAACAAGTTCGAGATGACAATGAGTTCCCAATTAGGGATTTCACTTCAAGATTGCCGGCGTCGCCGCCGCCGCCGGTAAATCTCATGCGATTT
TGAAACTATGGGATTGGGGATCTACAGATCAGTCTCTACCCATTGATTCTAATTAACTATGTGTATACTGTAATTTGCTAAAGATGTTGTTCGTAGAGCCAAGTGTATAA
ATATCTAAAAAAGGTTCTCTAATTATATATTCTTTCTATTGTTATTATTAACTGATTATGTTTGTCTCTAATTTCGTTTAATTTCAATAAACCTTCTACTAAAAAAAGTT
TAGTTATATAACTGAAACCTCTTTCTAATTTATGAATTTGATAAT
Protein sequenceShow/hide protein sequence
MFNHYNPFSFTHKLKSSIPSCFRPDHDAELHENEDDNPALKSMTSDLPELRGMCRSLVARISWPSRRRYHHSADFRYDPSSYALNFEDEQVRDDNEFPIRDFTSRLPASP
PPPVNLMRF