CuGenDBv2

Gene ID	Cmc07g0181771
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein FAM33A
Genome location	CMiso1.1chr07:932021..936402
RNA-Seq Expression	Cmc07g0181771
Synteny	Cmc07g0181771
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-67

86.54

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQ
        SMG PFVSD DDPA  +FKQITEEWT QVQSK GED QEDA+CSDVNKLLFSAVVQ
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQ

XP_004145489.1 spindle and kinetochore-associated protein 2 [Cucumis sativus]

9.1e-75

94.3

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKF-GEDAQEDADCSDVNKLLFSAVVQA
        SMGIPFVSDLDDPA +EFKQITEEWT QVQSKF GED QEDADC+DVNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKF-GEDAQEDADCSDVNKLLFSAVVQA

XP_008452819.1 PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo]

2.1e-79

98.73

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA
        SMGIPFVSDLDDPALAEFKQITEEWT QVQSKFGEDAQEDADCS+VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA

XP_022141272.1 spindle and kinetochore-associated protein 2 [Momordica charantia]

9.2e-67

86.45

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVV
        SMGIP VSDLDD A A+FK+ITEEWT QVQSK G+D QEDAD +DVNKLLFSAVV
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVV

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

1.4e-70

92.11

Show/hide

Query:  HLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIP
        HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQK+QASMG+P
Subjt:  HLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIP

Query:  FVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA
        FVSDLDDPA AEFKQITEEWT QVQSKFGED QEDAD +DVNKLLFSAVVQA
Subjt:  FVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5I9 Protein FAM33A

4.4e-75

94.3

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKF-GEDAQEDADCSDVNKLLFSAVVQA
        SMGIPFVSDLDDPA +EFKQITEEWT QVQSKF GED QEDADC+DVNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKF-GEDAQEDADCSDVNKLLFSAVVQA

A0A1S3BUQ8 Protein FAM33A

1.0e-79

98.73

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA
        SMGIPFVSDLDDPALAEFKQITEEWT QVQSKFGEDAQEDADCS+VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA

A0A5A7VFB8 Protein FAM33A

1.0e-79

98.73

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA
        SMGIPFVSDLDDPALAEFKQITEEWT QVQSKFGEDAQEDADCS+VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA

A0A6J1CJF1 Protein FAM33A

4.4e-67

86.45

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVV
        SMGIP VSDLDD A A+FK+ITEEWT QVQSK G+D QEDAD +DVNKLLFSAVV
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVV

A0A6J1F6V9 Protein FAM33A

2.9e-66

85.9

Show/hide

Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQ
        SMG PFVSD DDPA  +FKQITEEWT QVQSK GED QEDA+ SDVNKLLFSAVVQ
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQ

SwissProt top hits

e value

%identity

Alignment

Q4R8E8 Spindle and kinetochore-associated protein 2

6.7e-04

26.89

Show/hide

Query:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  ++    TL  + + V   +++   +    +    N++QK+Q        +DL+
Subjt:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD

Query:  -DPALAEFKQITEEWTAQV
          P   E K   E++ + +
Subjt:  -DPALAEFKQITEEWTAQV

Q8WVK7 Spindle and kinetochore-associated protein 2

1.0e-04

31.15

Show/hide

Query:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  I+    TL  + + V   +++   +    +    NM+QK+Q        +DL+
Subjt:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD

Query:  DPALAEFKQITEEWTAQVQSKF
           L +     EE TA  Q KF
Subjt:  DPALAEFKQITEEWTAQVQSKF

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

6.4e-42

57.43

Show/hide

Query:  HQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFV
        + HHQA D L+N+F++A+ DL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+Q+D++ LK QC ++L+AKQD+IDKA+T L+GN N++QKM AS+G    
Subjt:  HQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFV

Query:  SDLDDPALAEFKQITEEWTAQVQSK-FGEDAQEDADCSDVNKLLFSAV
         D DD ALA+F QI +EWT QV+S+  GE   EDAD  D+NK+LFSA+
Subjt:  SDLDDPALAEFKQITEEWTAQVQSK-FGEDAQEDADCSDVNKLLFSAV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGATCGATCATCATCTGCATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAA
GGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTT
TGACAGCTAAACAGGATGTAATCGATAAGGCGCGGACGGTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCTATGGGCATACCCTTTGTTAGCGACCTC
GATGATCCTGCATTGGCGGAATTCAAGCAGATCACCGAGGAGTGGACAGCACAAGTTCAATCAAAATTTGGGGAAGATGCCCAAGAGGACGCAGATTGTAGTGATGTCAA
CAAGTTGCTATTCTCGGCCGTGGTGCAGGCTTGA

mRNA sequence

Show/hide mRNA sequence

TATAAAATGAATCCATTGGCGCGGAAGGAACTTCAAATTGGGAGAGCGCGAAAACCCTAGCGGAGAGAGAGTATGGGGATCGATCATCATCTGCATCAACATCATCAAGC
GGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAA
TGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTTTGACAGCTAAACAGGATGTAATCGATAAGGCGCGGACG
GTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCTATGGGCATACCCTTTGTTAGCGACCTCGATGATCCTGCATTGGCGGAATTCAAGCAGATCACCGA
GGAGTGGACAGCACAAGTTCAATCAAAATTTGGGGAAGATGCCCAAGAGGACGCAGATTGTAGTGATGTCAACAAGTTGCTATTCTCGGCCGTGGTGCAGGCTTGATTTG
TAGAGTTTCAAAAGCAAAATTAAGTTTGCATGTATTCAGGTATTTCTCTACCTAATTTCATGATCTCACCCTGCCCTTCCGTCTACTAAACCTCTTTTACCTTCATCTTT
ATCAATATTTGACAAATTTCTGGAGAAAAACAAAACCCTGATGAAAACTAGTAGATTTTATTTAGAATTATTAAAAATAAACACGTACCCAAGCAATGGTAGTCTTTGTC
TTATTGTTAAATACTCATTTTTTTTTCTTATTCATTATCTACATATGATATGTTTG

Protein sequence

Show/hide protein sequence

MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDL
DDPALAEFKQITEEWTAQVQSKFGEDAQEDADCSDVNKLLFSAVVQA

Cmc07g0181771 (gene) of Melon (Charmono) v1.1 genome